Pre_GI: BLASTP Hits

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Query: NC_016822:1431200:1490525 Shigella sonnei 53G, complete genome

Start: 1490525, End: 1491568, Length: 1044

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:2448583:2466626246662624676721047Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,selenophosphate synthetase2e-156551
NC_015224:2618192:2635923263592326369691047Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,selenophosphate synthetase2e-156551
NC_010634:2376245:2379034237903423800801047Yersinia pseudotuberculosis PB1/+, complete genomeselenide, water dikinase4e-156550
NC_006155:2461262:2461262246126224623081047Yersinia pseudotuberculosis IP 32953, complete genomeselenophosphate synthetase4e-156550
NC_003143:2433190:2433966243396624350121047Yersinia pestis CO92, complete genomeselenophosphate synthetase4e-155547
NC_004088:2366000:2385180238518023862261047Yersinia pestis KIM, complete genomeselenophosphate synthetase4e-155547
NC_005810:2180303:2183092218309221841381047Yersinia pestis biovar Microtus str. 91001, complete genomeselenophosphate synthetase4e-155547
NC_008150:1705152:1705928170592817069741047Yersinia pestis Antiqua, complete genomeselenide, water dikinase4e-155547
NC_008149:1842500:1842580184258018436261047Yersinia pestis Nepal516, complete genomeselenide, water dikinase4e-155547
NC_010159:2440947:2457310245731024583561047Yersinia pestis Angola, complete genomeselenide, water dikinase4e-155547
NC_017265:2087487:2106892210689221079381047Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,selenide, water dikinase2e-154545
NC_017154:2430093:243094424309442431915972Yersinia pestis D106004 chromosome, complete genomeselenide, water dikinase3e-141501
NC_015410:2505168:2524905252490525259391035Pseudomonas mendocina NK-01 chromosome, complete genomeselenophosphate synthetase2e-123442
NC_015693:53196:7225272252732921041Runella slithyformis DSM 19594 plasmid pRUNSL01, complete sequenceSelenide, water dikinase1e-116419
NC_014118:2316000:2336092233609223371501059Burkholderia sp. CCGE1002 chromosome chromosome 2, completeselenide, water dikinase7e-89327
NC_013446:3147202:3171019317101931721131095Comamonas testosteroni CNB-2, complete genomeselenide, water dikinase8e-84310
NC_019902:831911:8534128534128544911080Thioalkalivibrio nitratireducens DSM 14787, complete genomeSelenide,water dikinase3e-83308
NC_010511:6711836:6730314673031467313631050Methylobacterium sp. 4-46 chromosome, complete genomeselenide, water dikinase2e-74279
NC_014377:1985714:1994072199407219951091038Thermosediminibacter oceani DSM 16646 chromosome, complete genomeselenophosphate synthase2e-64246
NC_009380:636000:6558296558296568421014Salinispora tropica CNB-440 chromosome, complete genomeselenide, water dikinase1e-63243
NC_003869:1812642:181761118176111818573963Thermoanaerobacter tengcongensis MB4, complete genomeSelenophosphate synthase1e-62240
NC_007760:3848190:387089338708933871837945Anaeromyxobacter dehalogenans 2CP-C, complete genomeselenide, water dikinase2e-62239
NC_020126:2883194:2884913288491328859711059Myxococcus stipitatus DSM 14675, complete genomeselenide, water dikinase2e-62239
NC_013131:621366:6343966343966354241029Catenulispora acidiphila DSM 44928, complete genomeselenide, water dikinase2e-62239
NC_015434:1671532:168960216896021690591990Verrucosispora maris AB-18-032 chromosome, complete genomeselenide, water dikinase6e-60231
NC_007644:1638083:166128316612831662269987Moorella thermoacetica ATCC 39073, complete genomeselenide, water dikinase2e-59229
NC_015519:426948:4633574633574643821026Tepidanaerobacter sp. Re1 chromosome, complete genomeSelenide, water dikinase5e-54211
NC_016584:4363382:4370559437055943715811023Desulfosporosinus orientis DSM 765 chromosome, complete genomeselenium donor protein4e-53208
NC_021182:401129:4196184196184206551038Clostridium pasteurianum BC1, complete genomeselenium donor protein1e-52207
NC_012108:2037429:203879820387982039718921Desulfobacterium autotrophicum HRM2, complete genomeSelD15e-51201
NC_015873:790961:794347794347795300954Megasphaera elsdenii DSM 20460, complete genomeselenide1e-49196
NC_016012:396910:406643406643407500858Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeselenide, water dikinase3e-47189
NC_013223:2337049:233704923370492338005957Desulfohalobium retbaense DSM 5692, complete genomeselenide, water dikinase3e-46186
NC_000918:707801:713839713839714774936Aquifex aeolicus VF5, complete genomeselenophosphate synthase7e-46184
NC_013173:3132517:313621531362153137180966Desulfomicrobium baculatum DSM 4028, complete genomeselenide, water dikinase2e-44179
NC_013171:416279:4171464171464181591014Anaerococcus prevotii DSM 20548, complete genomeselenide, water dikinase7e-43174
NC_013949:939695:958499958499959407909Helicobacter mustelae 12198 chromosome, complete genomeselenide,water dikinase5e-39162
NC_014507:2034000:2046049204604920470951047Methanoplanus petrolearius DSM 11571 chromosome, complete genomeselenide, water dikinase1e-35150
NC_009482:156171:1561711561711582132043Synechococcus sp. RCC307 chromosome, complete genomeselenophosphate synthase/FAD/NAD(P)-binding domain-containing protein3e-1996.3
NC_007516:193498:1934981934981955252028Synechococcus sp. CC9605, complete genomeSelenide,water dikinase7e-1685.1
NC_015519:245036:2566282566282576351008Tepidanaerobacter sp. Re1 chromosome, complete genomeThiamine-phosphate kinase5e-1168.9
NC_014972:2328228:2330770233077023318041035Desulfobulbus propionicus DSM 2032 chromosome, complete genomethiamine-monophosphate kinase6e-1168.6
NC_007644:711476:7264147264147280001587Moorella thermoacetica ATCC 39073, complete genomeAIR synthase related protein-like2e-1067.4
NC_012883:695652:699517699517700506990Thermococcus sibiricus MM 739, complete genomeHydrogenase expression/formation protein HypE1e-0964.7
NC_007681:1157402:117831111783111179294984Methanosphaera stadtmanae DSM 3091, complete genomepredicted selenophosphate synthetase-related protein2e-0963.5
NC_013510:465188:4711494711494722071059Thermomonospora curvata DSM 43183, complete genomeAIR synthase related protein2e-0860.1
NC_014654:2180994:2206595220659522075961002Halanaerobium sp. 'sapolanicus' chromosome, complete genomeAIR synthase related protein domain protein4e-0859.3
NC_013665:415998:437336437336438322987Methanocella paludicola SANAE, complete genomeputative thiamine-monophosphate kinase2e-0757
NC_009635:518000:519804519804520778975Methanococcus aeolicus Nankai-3 chromosome, complete genomeAIR synthase related protein6e-0755.5
NC_012483:3529895:3538925353892535400491125Acidobacterium capsulatum ATCC 51196, complete genomehydrogenase expression/formation protein HypE6e-0755.5
NC_015676:1663700:168212916821291683121993Methanosalsum zhilinae DSM 4017 chromosome, complete genomemethanogenesis marker protein 27e-0755.1
NC_015574:1676798:168684616868461687844999Methanobacterium sp. SWAN-1 chromosome, complete genomemethanogenesis marker protein 22e-0653.5
NC_015216:652266:657934657934658920987Methanobacterium sp. AL-21 chromosome, complete genomemethanogenesis marker protein 22e-0653.5
NC_015958:1465631:148776114877611488756996Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeAIR synthase-like protein domain-containing protein3e-0653.1
NC_015381:3091500:3101745310174531028001056Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative thiamine-monophosphate kinase5e-0652.4
NC_017276:1285824:1298374129837413005032130Sulfolobus islandicus REY15A chromosome, complete genomephosphoribosylformylglycinamidine synthase II9e-0651.2
NC_017275:1436875:1449425144942514515542130Sulfolobus islandicus HVE10/4 chromosome, complete genomephosphoribosylformylglycinamidine synthase II1e-0551.2