Pre_GI: BLASTP Hits

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Query: NC_016812:4246542:4254671 Sinorhizobium fredii HH103, complete genome

Start: 4254671, End: 4255303, Length: 633

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002678:3701500:373736337373633738010648Mesorhizobium loti MAFF303099, complete genomesimilar to DNA invertase1e-64246
NC_016812:463000:480936480936481592657Sinorhizobium fredii HH103, complete genometransposon Tn552 DNA-invertase binR2e-38158
NC_011369:4395773:440916744091674409817651Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeResolvase domain2e-37155
NC_008609:251608:272195272195272869675Pelobacter propionicus DSM 2379, complete genomeResolvase, N-terminal domain6e-37154
NC_009937:1733196:174168017416801742357678Azorhizobium caulinodans ORS 571, complete genomeresolvase family protein1e-34146
NC_007298:2689731:269958526995852700274690Dechloromonas aromatica RCB, complete genomeResolvase, N-terminal6e-34144
NC_011146:3991683:399538239953823996041660Geobacter bemidjiensis Bem, complete genomeResolvase domain8e-34143
NC_009431:40917:563255632557005681Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03, completehypothetical protein4e-33141
NC_013173:953633:976055976055976738684Desulfomicrobium baculatum DSM 4028, complete genomeResolvase domain protein2e-32138
NC_011146:1998981:200636420063642007050687Geobacter bemidjiensis Bem, complete genomeResolvase domain8e-32136
NC_011000:3362382:337420133742013374914714Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative phage resolvase/recombinase for integration and excision1e-31135
NC_016609:606000:625315625315625977663Niastella koreensis GR20-10 chromosome, complete genomeResolvase domain-containing protein1e-31135
NC_010511:5424004:543344754334475434157711Methylobacterium sp. 4-46 chromosome, complete genomeresolvase domain-containing protein4e-31134
NC_009485:5171658:518306951830695183713645Bradyrhizobium sp. BTAi1 chromosome, complete genomeDNA-invertase6e-31134
NC_014958:843456:854304854304854969666Deinococcus maricopensis DSM 21211 chromosome, complete genomeResolvase domain-containing protein9e-31133
NC_010084:2674972:268798226879822688695714Burkholderia multivorans ATCC 17616 chromosome 1, completeresolvase domain-containing protein2e-30132
NC_010804:831000:836078836078836791714Burkholderia multivorans ATCC 17616 chromosome 1, completeserine recombinase2e-30132
NC_014958:557208:568633568633569298666Deinococcus maricopensis DSM 21211 chromosome, complete genomeResolvase domain-containing protein5e-30130
NC_002947:1268089:127665712766571277367711Pseudomonas putida KT2440, complete genomesite-specific recombinase, resolvase family1e-29129
NC_011146:3426500:346533034653303465995666Geobacter bemidjiensis Bem, complete genomeResolvase domain2e-29129
NC_011769:3434744:344837734483773449063687Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeResolvase domain protein2e-29128
NC_012526:2155947:217099521709952171678684Deinococcus deserti VCD115, complete genomeputative resolvase, N terminal domain (putative serine recombinase family, catalytic domain)9e-29126
NC_007925:4060635:407180240718024072548747Rhodopseudomonas palustris BisB18, complete genomeResolvase-like2e-27122
NC_004463:5540924:555310755531075553823717Bradyrhizobium japonicum USDA 110, complete genomeputative resolvase2e-27122
NC_007517:2564361:258513825851382585788651Geobacter metallireducens GS-15, complete genomeResolvase-like3e-27121
NC_016609:7608723:761556276155627616245684Niastella koreensis GR20-10 chromosome, complete genomeResolvase domain-containing protein9e-27120
NC_014923:4017575:403353240335324034305774Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeResolvase domain3e-26118
NC_009485:7021228:703264170326417033312672Bradyrhizobium sp. BTAi1 chromosome, complete genomeresolvase3e-25115
NC_007492:3954345:398111639811163981862747Pseudomonas fluorescens PfO-1, complete genomeResolvase-like3e-25114
NC_011894:7563668:758709175870917587786696Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein4e-24111
NC_007778:1053462:106665810666581067362705Rhodopseudomonas palustris HaA2, complete genomeResolvase-like5e-24110
NC_010505:4396800:441274144127414413436696Methylobacterium radiotolerans JCM 2831, complete genomeResolvase domain protein7e-24110
NC_010725:2589014:259846725984672599141675Methylobacterium populi BJ001, complete genomeResolvase domain4e-23107
NC_011146:3426500:346821434682143468807594Geobacter bemidjiensis Bem, complete genomeResolvase domain6e-21100
NC_008463:1912348:192200019220001922695696Pseudomonas aeruginosa UCBPP-PA14, complete genomepossible resolvase6e-2097.4
NC_013132:7954000:797813379781337978768636Chitinophaga pinensis DSM 2588, complete genomeresolvase domain protein1e-1996.7
NC_017249:8510121:853227585322758532970696Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-1995.1
NC_012988:4633930:464917846491784649987810Methylobacterium extorquens DM4, complete genomeresolvase, N-terminal1e-1892.8
NC_010172:4185904:420216842021684202977810Methylobacterium extorquens PA1, complete genomeResolvase domain1e-1892.8
NC_014815:841484:877025877025877648624Micromonospora sp. L5 chromosome, complete genomeresolvase domain protein5e-1374.3
NC_013862:27991:326423264233361720Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequenceResolvase domain protein6e-1373.9
NC_008699:1132790:114850611485061149189684Nocardioides sp. JS614, complete genomeResolvase, N-terminal domain3e-1271.6
NC_013441:1487058:149085514908551491550696Gordonia bronchialis DSM 43247, complete genomeResolvase domain protein1e-1066.6
NC_016906:3006748:301666730166673017305639Gordonia polyisoprenivorans VH2 chromosome, complete genomeresolvase1e-1066.2
NC_014158:1479313:149176514917651492412648Tsukamurella paurometabola DSM 20162 chromosome, complete genomeResolvase domain protein2e-1065.5
NC_005090:1812833:182048618204861821109624Wolinella succinogenes DSM 1740, complete genomeHYPOTHETICAL PROTEIN-Putative Site-specific recombinase3e-1065.1
NC_010162:8760128:876213487621348762838705Sorangium cellulosum 'So ce 56', complete genomeputative recombinase3e-1065.1
NC_009077:3851203:3859860385986038610021143Mycobacterium sp. JLS, complete genomeResolvase, N-terminal domain2e-0962.8
NC_007712:1182518:119172311917231192313591Sodalis glossinidius str. 'morsitans', complete genomephage DNA-invertase7e-0960.5
NC_019771:2461000:247410324741032474672570Anabaena cylindrica PCC 7122, complete genomeResolvase domain protein3e-0858.5
NC_019774:74131:833278332783896570Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequenceResolvase domain protein3e-0858.5
NC_016624:112919:112919112919113497579Azospirillum lipoferum 4B plasmid AZO_p5, complete sequencesite-specific DNA recombinase, ISAli20, Tn3 family3e-0858.5
NC_010172:2722000:273599827359982736843846Methylobacterium extorquens PA1, complete genomeResolvase domain7e-0857.4
NC_008347:1636660:164962816496281650176549Maricaulis maris MCS10, complete genomeResolvase8e-0857
NC_014355:4151798:416274541627454163440696Candidatus Nitrospira defluvii, complete genomeputative site-specific DNA recombinase1e-0756.6
NC_013446:4281250:429116142911614291727567Comamonas testosteroni CNB-2, complete genomeResolvase-like protein1e-0756.6
NC_011894:7421867:742715374271537428040888Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein2e-0756.2
NC_011283:2836000:289252528925252893121597Klebsiella pneumoniae 342 chromosome, complete genomeDNA-invertase hin2e-0756.2
NC_010501:3987615:399935239993524000065714Pseudomonas putida W619, complete genomeResolvase domain1e-0756.2
NC_008752:3217695:323449732344973235420924Acidovorax avenae subsp. citrulli AAC00-1, complete genomeResolvase, N-terminal domain2e-0755.8
NC_008752:2936933:296832429683242969247924Acidovorax avenae subsp. citrulli AAC00-1, complete genomeResolvase, N-terminal domain2e-0755.8
NC_015660:739040:7405367405367419271392Geobacillus thermoglucosidasius C56-YS93 chromosome, completeResolvase domain-containing protein3e-0755.5
NC_009092:4585784:459390045939004594484585Shewanella loihica PV-4, complete genomeResolvase, N-terminal domain4e-0755.1
NC_018000:1207231:120989412098941210463570Sinorhizobium fredii USDA 257 chromosome, complete genometransposon Tn552 DNA-invertase BinR4e-0755.1
NC_002695:301939:306891306891307445555Escherichia coli O157:H7 str. Sakai, complete genomeDNA-invertase4e-0755.1
NC_011353:305820:310772310772311326555Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA-invertase4e-0755.1
NC_013008:306953:310772310772311326555Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA invertase from prophage CP-933H4e-0755.1
NC_002655:301940:306856306856307446591Escherichia coli O157:H7 EDL933, complete genomeDNA invertase from prophage CP-933H3e-0755.1
NC_006350:1938631:197529319752931975937645Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative recombinase3e-0755.1
AC_000091:1191353:121126212112621211816555Escherichia coli W3110 DNA, complete genomesite-specific DNA recombinase3e-0755.1
NC_000913:1188999:120890812089081209462555Escherichia coli K12, complete genomee14 prophage; site-specific DNA recombinase3e-0755.1
NC_011662:2374955:238635323863532386928576Thauera sp. MZ1T, complete genomeResolvase domain protein4e-0754.7
NC_009342:135500:153413153413154030618Corynebacterium glutamicum R chromosome, complete genomehypothetical protein4e-0754.7
NC_006873:1:129129722594Bacteroides fragilis NCTC 9343 plasmid pBF9343, complete sequenceputative resolvase/DNA invertase5e-0754.3
NC_020181:5217000:524391752439175244486570Enterobacter aerogenes EA1509E, complete genomeDNA-invertase5e-0754.3
NC_012857:1097400:111612511161251116718594Ralstonia pickettii 12D chromosome 2, complete genomeResolvase domain protein5e-0754.3
NC_007507:101887:117717117717118640924Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,Tn5045 resolvase6e-0754.3
NC_012880:3529017:354256735425673543136570Dickeya dadantii Ech703, complete genomeResolvase domain protein6e-0754.3
NC_013850:2182337:224002122400212240590570Klebsiella variicola At-22 chromosome, complete genomeResolvase domain protein6e-0754.3
NC_009338:2042664:206317020631702063799630Mycobacterium gilvum PYR-GCK chromosome, complete genomeresolvase domain-containing protein8e-0753.9
NC_009656:115390:116395116395117324930Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein7e-0753.9
NC_006582:2944237:2992454299245429938571404Bacillus clausii KSM-K16, complete genomesite-specific recombinase for integration and excision1e-0653.1
NC_015376:2061990:206887020688702069424555Burkholderia gladioli BSR3 chromosome chromosome 2, completeResolvase domain protein1e-0653.1
NC_011586:268927:317739317739318224486Acinetobacter baumannii AB0057 chromosome, complete genomeinvertase/recombinase protein1e-0653.1
NC_010611:240839:255477255477255962486Acinetobacter baumannii ACICU, complete genomesite-specific recombinase, DNA invertase Pin protein1e-0653.1
NC_009454:136468:1560681560681575431476Pelotomaculum thermopropionicum SI, complete genomehypothetical protein2e-0652.8
NC_008380:2287327:228814422881442288707564Rhizobium leguminosarum bv. viciae 3841, complete genomeputative DNA-invertase2e-0652.8
NC_015160:3556114:355965335596533560171519Odoribacter splanchnicus DSM 20712 chromosome, complete genomeResolvase domain2e-0652.8
NC_009656:5505413:550483855048385505416579Pseudomonas aeruginosa PA7 chromosome, complete genomeDNA-invertase2e-0652.8
NC_013893:1723939:172458317245831725176594Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeResolvase/integrase Bin2e-0652.4
NC_006663:1:504250425620579Staphylococcus epidermidis RP62A plasmid pSERP, complete sequencesite-specific recombinase, resolvase family2e-0652.4
NC_021175:1291707:130395313039531304597645Streptococcus oligofermentans AS 1.3089, complete genomeresolvase3e-0652
NC_009720:583060:605232605232605843612Xanthobacter autotrophicus Py2, complete genomeresolvase domain-containing protein3e-0652
NC_014550:889500:914521914521915093573Arthrobacter arilaitensis Re117, complete genomeputative resolvase3e-0651.6
NC_014801:1:215732157322187615Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet,cpp274e-0651.6
NC_011667:1:105081050811122615Thauera sp. MZ1T plasmid pTha01, complete sequenceResolvase domain protein4e-0651.6
NC_003197:2894344:291484229148422915414573Salmonella typhimurium LT2, complete genomeDNA-invertase Hin5e-0651.2
NC_016856:2896630:293507729350772935649573Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA-invertase Hin5e-0651.2
NC_016860:2917910:293840829384082938980573Salmonella enterica subsp. enterica serovar Typhimurium strDNA-invertase Hin5e-0651.2
NC_016863:2844883:288333028833302883902573Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA-invertase Hin5e-0651.2
NC_011080:2870428:289148128914812892047567Salmonella enterica subsp. enterica serovar Newport str. SL254,DNA-invertase hin5e-0651.2
NC_013739:3006719:3019445301944530209741530Conexibacter woesei DSM 14684, complete genomeResolvase domain protein6e-0650.8
NC_004349:3938:167331673317290558Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceISSod9, DNA-invertase6e-0650.8
NC_003888:4750489:476711547671154767627513Streptomyces coelicolor A3(2), complete genomeDNA invertase9e-0650.4
NC_009092:1127000:114712611471261147743618Shewanella loihica PV-4, complete genomeResolvase, N-terminal domain9e-0650.4
NC_007626:3522265:359093035909303591538609Magnetospirillum magneticum AMB-1, complete genomeSite-specific recombinase8e-0650.4
NC_010511:7400255:741977274197727420377606Methylobacterium sp. 4-46 chromosome, complete genomeresolvase domain-containing protein8e-0650.4
NC_011083:2847318:288963028896302890193564Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA-invertase hin7e-0650.4
NC_011094:2791719:282196128219612822533573Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-invertase hin7e-0650.4
NC_010102:2862178:287925728792572879829573Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-0650.4
NC_006511:2718401:273066527306652731159495Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC7e-0650.4
NC_011147:2713937:272620127262012726695495Salmonella enterica subsp. enterica serovar Paratyphi A str7e-0650.4
NC_013730:4118355:412587041258704126490621Spirosoma linguale DSM 74, complete genomeResolvase domain protein9e-0650.4