Pre_GI: BLASTP Hits

Some Help

Query: NC_016445:984856:986628 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 986628, End: 986849, Length: 222

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009457:1068000:106810110681011068619519Vibrio cholerae O395 chromosome 2, complete sequencehcp protein2e-29127
NC_016944:1504888:150666015066601507178519Vibrio cholerae IEC224 chromosome I, complete sequencehcp protein2e-29127
NC_012668:2115228:213392121339212134439519Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHcp protein2e-29127
NC_012578:1465302:146707414670741467592519Vibrio cholerae M66-2 chromosome I, complete sequencehcp protein2e-29127
NC_002505:1507860:150963215096321510150519Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehcp protein2e-29127
NC_016602:2037162:205442320544232054941519Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehcp protein3e-29127
NC_014500:3097362:313812731381273138645519Dickeya dadantii 3937 chromosome, complete genomeHcp1e-23108
NC_013421:57961:652456524565763519Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family2e-23107
NC_014532:3596097:360886636088663609384519Halomonas elongata DSM 2581, complete genomeK068872e-23107
NC_014500:894136:914093914093914611519Dickeya dadantii 3937 chromosome, complete genomeHcp3e-23107
NC_008570:1986466:199051519905151991033519Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehemolysin co-regulated protein3e-23106
NC_009349:78000:780487804810171623669Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete4e-23106
NC_012912:2901021:291846629184662918984519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family6e-23105
NC_012912:1701231:171793717179371718455519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family6e-23105
NC_015968:4117835:412532441253244125842519Enterobacter asburiae LF7a chromosome, complete genomeHcp1 family type VI secretion system effector4e-22103
NC_011745:258727:263724263724264242519Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-22103
NC_008563:258725:263718263718264236519Escherichia coli APEC O1, complete genomehypothetical protein3e-22103
NC_008253:257059:263065263065263583519Escherichia coli 536, complete genomehypothetical hemolysin co-regulated protein3e-22103
NC_007946:258747:263740263740264258519Escherichia coli UTI89, complete genomehypothetical protein3e-22103
NC_011751:256830:261820261820262338519Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-22103
NC_011742:258746:263739263739264257519Escherichia coli S88 chromosome, complete genomehypothetical protein3e-22103
NC_011149:1110642:111395011139501114468519Salmonella enterica subsp. enterica serovar Agona str. SL483,hcp3e-22103
NC_011274:1129686:113485311348531135371519Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-22103
NC_002695:261235:264133264133264651519Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-22102
CU928160:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomeConserved hypothetical protein Aec16 (Hcp-like)5e-22102
NC_002655:261236:264134264134264652519Escherichia coli O157:H7 EDL933, complete genomehypothetical protein5e-22102
NC_011353:261220:264118264118264636519Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein5e-22102
NC_011741:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomehypothetical protein5e-22102
NC_013008:261226:264124264124264642519Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein5e-22102
NC_013941:261094:264076264076264594519Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHcp5e-22102
NC_016822:267758:273014273014273532519Shigella sonnei 53G, complete genomehemolysin co-regulated protein4e-21100
NC_015559:2745570:275060527506052751123519Marinomonas posidonica IVIA-Po-181 chromosome, complete genometype VI secretion system effector, Hcp1 family7e-2199
NC_002947:4604582:461052046105204611035516Pseudomonas putida KT2440, complete genomehcp protein6e-1992.8
NC_020829:1307736:132614213261421326660519Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein1e-1788.6
NC_009439:4913767:491983749198374920355519Pseudomonas mendocina ymp, complete genomehypothetical protein2e-1787.8
NC_010505:1205747:121487812148781215393516Methylobacterium radiotolerans JCM 2831, complete genometype VI secretion system effector, Hcp1 family3e-1787
NC_007492:2310793:233099623309962331511516Pseudomonas fluorescens PfO-1, complete genomeProtein of unknown function DUF7964e-1786.7
NC_008027:5576458:559406755940675594585519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1A6e-1786.3
NC_008027:896000:896182896182896700519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1A5e-1786.3
NC_008027:558507:558507558507559025519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1B5e-1786.3
NC_008027:4889662:491355949135594914077519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1C5e-1786.3
NC_008463:282565:288454288454288972519Pseudomonas aeruginosa UCBPP-PA14, complete genomeSecreted protein Hcp2e-1684.7
NC_009802:114749:147250147250147771522Campylobacter concisus 13826, complete genomesecreted protein Hcp9e-1682
NC_016642:1234500:124842712484271248942516Pseudovibrio sp. FO-BEG1 chromosome, complete genometype VI secretion system effector1e-1582
NC_014166:1751906:175350717535071754031525Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeHcp1 family type VI secretion system effector7e-1579.3
NC_008027:3844355:387980238798023880302501Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 2A4e-1476.6
NC_012962:1041518:106320410632041063683480Photorhabdus asymbiotica, complete genomehypothetical protein3e-0753.9
NC_014500:1862000:190553719055371905716180Dickeya dadantii 3937 chromosome, complete genomehcp1e-0652
NC_012962:869295:891705891705892184480Photorhabdus asymbiotica, complete genomehypothetical protein1e-0652
NC_012912:844339:852670852670853137468Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family1e-0652
NC_012917:1840172:187440618744061874891486Pectobacterium carotovorum subsp. carotovorum PC1, complete genometype VI secretion system effector, Hcp1 family1e-0652
NC_004578:2797493:280387428038742804389516Pseudomonas syringae pv. tomato str. DC3000, complete genomesecreted protein Hcp5e-0650.1