Pre_GI: BLASTP Hits

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Query: NC_014624:287500:295240 Eubacterium limosum KIST612 chromosome, complete genome

Start: 295240, End: 296514, Length: 1275

Host Lineage: Eubacterium limosum; Eubacterium; Eubacteriaceae; Clostridiales; Firmicutes; Bacteria

General Information: Eubacterium limosum KIST612 is an acetogenic bacterium isolated from an anaerobic digester and has a high growth rate on synthesis gas (CO; carbon monoxide) using it as a sole energy source. This organism produces acetate as well as butyrate and ethanol as fermentation products from syngas. Therefore, E. limosum KIST612 has been considered for a model strain for bioenergy production from syngas (obtained from biomass).




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:4767269:4777344477734447786061263Klebsiella pneumoniae 342 chromosome, complete genometransporter divalent anion:Na+ symporter (DASS) family4e-80298
NC_013850:4612812:4622887462288746241491263Klebsiella variicola At-22 chromosome, complete genomeanion transporter4e-80298
NC_011080:819103:8329038329038341711269Salmonella enterica subsp. enterica serovar Newport str. SL254,anion transporter1e-59231
NC_011149:779903:7922257922257934931269Salmonella enterica subsp. enterica serovar Agona str. SL483,anion transporter2e-59230
NC_016856:819482:8289138289138301601248Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cation transporter2e-59230
NC_016863:819478:8289138289138301601248Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cation transporter2e-59230
NC_010102:2287934:2294382229438222956501269Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-59230
NC_011083:862901:8767898767898780571269Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,anion transporter2e-59230
NC_011205:839425:8527338527338540011269Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853anion transporter2e-59230
NC_016810:819489:8278068278068290741269Salmonella enterica subsp. enterica serovar Typhimurium strputative cation transporter2e-59230
NC_016857:819429:8278068278068290741269Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative divalent ion symporter2e-59230
NC_017046:819414:8277918277918290591269Salmonella enterica subsp. enterica serovar Typhimurium str. 798cation transporter2e-59230
NC_003197:815964:8285718285718298181248Salmonella typhimurium LT2, complete genomeputative cation transporter1e-59230
NC_016860:857500:8673808673808686481269Salmonella enterica subsp. enterica serovar Typhimurium stranion transporter1e-59230
NC_016831:2209834:2216286221628622175541269Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-59229
NC_012125:793812:8057508057508070181269Salmonella enterica subsp. enterica serovar Paratyphi C straincation transporter4e-59229
NC_009648:838000:8487758487758500431269Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative response regulator, membrane protein6e-59228
NC_011274:793681:8055978055978068651269Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cation transporter1e-58227
NC_006905:848000:8571968571968584641269Salmonella enterica subsp. enterica serovar Choleraesuis strputative cation transporter1e-58227
NC_010718:2860096:2860096286009628613401245Natranaerobius thermophilus JW/NM-WN-LF, complete genomeanion transporter1e-56220
NC_007519:1244198:1266034126603412673801347Desulfovibrio alaskensis G20 chromosome, complete genomecation transporter5e-55215
NC_016048:3899878:3909090390909039103611272Oscillibacter valericigenes Sjm18-20, complete genomecitrate transporter family protein1e-44181
NC_009635:905768:9087559087559101251371Methanococcus aeolicus Nankai-3 chromosome, complete genomeanion transporter1e-29131
NC_010554:1871000:1893195189319518950241830Proteus mirabilis HI4320, complete genomecation transporter7e-29128
NC_009092:2902171:2929103292910329304941392Shewanella loihica PV-4, complete genomeanion transporter5e-28125
NC_009434:608765:6376116376116394071797Pseudomonas stutzeri A1501, complete genomesodium/sulfate symporter family transporter8e-28125
NC_013889:1740858:1765213176521317670331821Thioalkalivibrio sp. K90mix chromosome, complete genomeCitrate transporter3e-27123
NC_009707:36024:5459854598559651368Campylobacter jejuni subsp. doylei 269.97 chromosome, completeCitT protein7e-26118
NC_000909:597692:5976925976925989901299Methanocaldococcus jannaschii DSM 2661, complete genomemembrane bound transport protein, putative1e-24114
NC_016048:797762:8076438076438089141272Oscillibacter valericigenes Sjm18-20, complete genomecitrate transporter family protein3e-24113
NC_014759:4133809:4146497414649741482901794Marivirga tractuosa DSM 4126 chromosome, complete genomecitrate transporter2e-23110
NC_018080:1100047:1102600110260011044321833Pseudomonas aeruginosa DK2 chromosome, complete genomesodium:sulfate symporter7e-23108
NC_011770:1226923:1228025122802512298571833Pseudomonas aeruginosa LESB58, complete genomeputative sodium:sulfate symporter7e-23108
NC_008463:1223012:1224114122411412259461833Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative sodium/sulphate transporter7e-23108
NC_013887:1462918:1480370148037014816681299Methanocaldococcus sp. FS406-22 chromosome, complete genomeanion transporter2e-22107
NC_009615:919495:9332429332429347951554Parabacteroides distasonis ATCC 8503 chromosome, complete genomeNa+/sulfate symporter2e-22107
NC_015733:3736104:3736104373610437379331830Pseudomonas putida S16 chromosome, complete genomecitrate transporter1e-22107
NC_010519:71365:9273592735941231389Haemophilus somnus 2336 chromosome, complete genomeanion transporter3e-22106
NC_008309:190550:2195322195322209201389Haemophilus somnus 129PT, complete genomeconserved transporter, NadC family3e-22106
NC_013156:573037:5919145919145932121299Methanocaldococcus fervens AG86, complete genomeanion transporter4e-22105
NC_002516:4285477:4300117430011743019491833Pseudomonas aeruginosa PAO1, complete genomeprobable sodium:sulfate symporter5e-22105
NC_018691:1822731:1822731182273118245031773Alcanivorax dieselolei B5 chromosome, complete genomeTrkA-like protein8e-22105
NC_014297:476510:4765104765104783181809Halalkalicoccus jeotgali B3 chromosome, complete genomearsenite transport protein4e-21103
NC_018000:1207231:1214567121456712163451779Sinorhizobium fredii USDA 257 chromosome, complete genometransporter4e-2099.8
NC_017068:2569609:2569609256960925711531545Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative sodium-dependent dicarboxylate transporter7e-2099
NC_014836:155924:1559241559241577771854Desulfurispirillum indicum S5 chromosome, complete genomeCitrate transporter1e-1998.2
NC_014541:1231021:1234607123460712359981392Ferrimonas balearica DSM 9799 chromosome, complete genomeanion transporter1e-1998.2
NC_011883:1601552:1620760162076016225891830Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Citrate transporter1e-1997.8
NC_007760:3948730:3948730394873039505411812Anaeromyxobacter dehalogenans 2CP-C, complete genomeTrkA-C1e-1997.8
NC_013173:1259898:1292156129215612939701815Desulfomicrobium baculatum DSM 4028, complete genomeCitrate transporter2e-1997.4
NC_010814:1551624:1607954160795416097291776Geobacter lovleyi SZ, complete genomeTrkA-C domain protein5e-1995.9
NC_006138:857692:8633748633748652541881Desulfotalea psychrophila LSv54, complete genomesimilar to Na/dicarboxylate cotransporter1e-1895.1
NC_009439:2038303:2051770205177020535331764Pseudomonas mendocina ymp, complete genomecitrate transporter3e-1893.6
NC_009708:853063:8625748625748639531380Yersinia pseudotuberculosis IP 31758 chromosome, complete genomedivalent anion:Na+ symporter (DASS) family protein6e-1892.4
NC_010634:3762532:3769257376925737706361380Yersinia pseudotuberculosis PB1/+, complete genomeanion transporter6e-1892.4
NC_006155:3846315:3856201385620138575801380Yersinia pseudotuberculosis IP 32953, complete genomeSodium:sulfate symporter, DASS family6e-1892.4
NC_015216:328598:3459073459073473041398Methanobacterium sp. AL-21 chromosome, complete genomeanion transporter9e-1891.7
NC_010465:868402:8818248818248832031380Yersinia pseudotuberculosis YPIII, complete genomeanion transporter2e-1790.9
NC_015740:2614317:2616696261669626181441449Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completedi- and tricarboxylate transporter3e-1790.1
NC_011901:3363500:3385155338515533869961842Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeTrkA-C domain-containing protein4e-1789.7
NC_007963:1908964:1912082191208219138481767Chromohalobacter salexigens DSM 3043, complete genomeTrkA-like protein9e-1788.2
NC_006322:741516:7686787686787701021425Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-1687.8
NC_015738:2956398:2960633296063329619071275Eggerthella sp. YY7918, complete genomeNa+/H+ antiporter NhaD2e-1687.8
NC_016599:513357:5311825311825325971416Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeanion transporter2e-1687.4
NC_014532:1579419:1579419157941915811821764Halomonas elongata DSM 2581, complete genomeTrkA-C domain protein2e-1687
NC_013523:959625:9596259596259612171593Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeanion transporter5e-1685.9
NC_010184:3213347:3227831322783132291561326Bacillus weihenstephanensis KBAB4, complete genomeCitrate transporter6e-1685.9
NC_015731:1731896:1731896173189617336711776Nitrosomonas sp. Is79A3 chromosome, complete genomeTrkA-C domain-containing protein9e-1685.1
NC_015731:169989:1748541748541762361383Nitrosomonas sp. Is79A3 chromosome, complete genomeanion transporter9e-1685.1
NC_014371:177536:2179952179952194611467Prevotella melaninogenica ATCC 25845 chromosome chromosome II,transporter, divalent anion:Na+ symporter (DASS) family protein5e-1582.8
NC_008380:4078670:4094511409451140962531743Rhizobium leguminosarum bv. viciae 3841, complete genomeputative transmembrane transporter protein9e-1581.6
NC_011059:1896593:1908072190807219098531782Prosthecochloris aestuarii DSM 271, complete genomeTrkA-C domain protein1e-1481.3
NC_009033:653462:6651546651546664701317Staphylothermus marinus F1, complete genomeCitrate transporter2e-1480.9
NC_015387:1803938:1837125183712518385551431Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeanion transporter3e-1480.1
NC_014829:4057318:4067423406742340691981776Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeTrkA-C domain protein5e-1479.3
NC_013166:194614:2138952138952157241830Kangiella koreensis DSM 16069, complete genomeTrkA-C domain protein6e-1479
NC_019902:1061432:1097802109780210996191818Thioalkalivibrio nitratireducens DSM 14787, complete genomeSLC13 permease family protein6e-1479
NC_012850:3454270:3469578346957834713231746Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeCitrate transporter7e-1478.6
NC_010994:3666651:3682507368250736842491743Rhizobium etli CIAT 652, complete genomeputative transporter protein1e-1378.2
NC_006138:2341975:2344300234430023456431344Desulfotalea psychrophila LSv54, complete genomehypothetical protein1e-1378.2
NC_015161:1748236:1751056175105617528371782Deinococcus proteolyticus MRP chromosome, complete genomeCitrate transporter2e-1377
NC_014926:608894:6143656143656161371773Thermovibrio ammonificans HB-1 chromosome, complete genomeTrkA-C domain protein3e-1377
NC_009337:715500:7373387373387391191782Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeTrkA domain-containing protein3e-1376.6
NC_014634:28690:3242532425338461422Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequenceanion transporter5e-1375.9
NC_018524:2423016:2441234244123424427991566Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeNa+ symporter family protein5e-1375.9
NC_014392:1935130:1955771195577119570361266Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeCitrate transporter9e-1375.1
NC_015565:1281397:1293258129325812945411284Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeCitrate transporter1e-1274.7
NC_016799:167362:1726521726521742261575Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein1e-1274.7
NC_008319:171847:2030882030882048421755Synechococcus sp. CC9311, complete genomeDi/tricarboxylate transporter1e-1274.7
NC_016782:152764:1570571570571586311575Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein1e-1274.7
NC_016787:135677:1447671447671463411575Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein1e-1274.7
NC_012881:2957309:2958478295847829602831806Desulfovibrio salexigens DSM 2638, complete genomeCitrate transporter1e-1274.3
NC_007761:3564449:3581024358102435827661743Rhizobium etli CFN 42, complete genomeprobable cation transporter protein1e-1274.3
NC_009831:3612206:3615825361582536175521728Shewanella sediminis HAW-EB3, complete genomeTrkA-C domain protein2e-1273.9
NC_016800:163436:1677651677651693391575Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein2e-1273.9
NC_016584:1998000:2016301201630120177131413Desulfosporosinus orientis DSM 765 chromosome, complete genomeanion transporter2e-1273.6
NC_009831:3583856:3583856358385635855831728Shewanella sediminis HAW-EB3, complete genomeTrkA-C domain protein3e-1273.6
NC_009767:3335021:3338657333865733404741818Roseiflexus castenholzii DSM 13941, complete genomeTrkA-C domain protein8e-1272
NC_019791:570923:5720295720295737231695Caldisphaera lagunensis DSM 15908 chromosome, complete genomeNa+/H+ antiporter NhaD-like permease9e-1271.6
NC_015318:981989:9888709888709905401671Hippea maritima DSM 10411 chromosome, complete genomeCitrate transporter1e-1171.6
NC_007798:112840:1275561275561291571602Neorickettsia sennetsu str. Miyayama, complete genomeputative transporter1e-1171.2
NC_015589:814530:8365698365698380771509Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesodium/sulfate symporter4e-1169.7
NC_009051:2097271:2125523212552321268031281Methanoculleus marisnigri JR1, complete genomeCitrate transporter6e-1169.3
NC_009454:1577319:1605519160551916069491431Pelotomaculum thermopropionicum SI, complete genomedi- and tricarboxylate transporters2e-1067.8
NC_016051:1385490:1408783140878314100631281Thermococcus sp. AM4 chromosome, complete genomeNa+/H+ antiporter NhaD type2e-1067.4
NC_008268:3162824:3182291318229131838981608Rhodococcus sp. RHA1, complete genomesodium symporter, ABC superfamily2e-1067.4
NC_013422:1604157:1621738162173816234771740Halothiobacillus neapolitanus c2, complete genomeTrkA-C domain protein3e-1067
NC_015565:530000:5332645332645345471284Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeCitrate transporter8e-1065.5
NC_009663:982048:9937359937359950811347Sulfurovum sp. NBC37-1, complete genomesodium:sulphate symporter8e-1065.5
NC_009092:1599526:1638702163870216404291728Shewanella loihica PV-4, complete genomeTrkA-C domain protein8e-1065.5
NC_005945:4670978:4670978467097846723121335Bacillus anthracis str. Sterne, complete genomearsenical pump family protein9e-1065.1
NC_014831:2224733:2239157223915722405991443Thermaerobacter marianensis DSM 12885 chromosome, complete genomeanion transporter1e-0964.3
NC_017179:905347:9085389085389098001263Clostridium difficile BI1, complete genomehypothetical protein2e-0964.3
NC_009089:965959:9691499691499704111263Clostridium difficile 630, complete genomehypothetical protein2e-0964.3
NC_013315:895500:8986688986689000231356Clostridium difficile CD196 chromosome, complete genomehypothetical protein2e-0963.9
NC_013316:891782:8962838962838976381356Clostridium difficile R20291, complete genomehypothetical protein2e-0963.9
NC_018524:2423016:2442893244289324444581566Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeNa+ symporter family protein2e-0963.9
NC_013009:122000:1386461386461403341689Neorickettsia risticii str. Illinois, complete genomeputative transporter3e-0963.5
NC_016751:1524848:1538997153899715402711275Marinitoga piezophila KA3 chromosome, complete genomeNa+/H+ antiporter NhaD-like permease3e-0963.2
NC_021171:608315:6151296151296164271299Bacillus sp. 1NLA3E, complete genomehypothetical protein6e-0962.4
NC_018750:6132619:6152651615265161539491299Streptomyces venezuelae ATCC 10712, complete genomeNa+ or H+ antiporter NhaD type8e-0962
NC_007086:1224867:1224867122486712267291863Xanthomonas campestris pv. campestris str. 8004, complete genomesulfur deprivation response regulator2e-0860.8
NC_003902:3666544:3732791373279137346531863Xanthomonas campestris pv. campestris str. ATCC 33913, completesulfur deprivation response regulator2e-0860.8
NC_019977:1621939:1639504163950416407421239Methanomethylovorans hollandica DSM 15978, complete genomeNa+/H+ antiporter NhaD-like permease3e-0860.1
NC_009454:1577319:1612997161299716144271431Pelotomaculum thermopropionicum SI, complete genomedi- and tricarboxylate transporters4e-0859.7
NC_009832:3703202:3718200371820037193121113Serratia proteamaculans 568, complete genomeCitrate transporter4e-0859.7
NC_018012:4221612:4239856423985642411031248Thiocystis violascens DSM 198 chromosome, complete genomeNa+/H+ antiporter NhaD-like permease3e-0756.6
NC_002754:105256:1227861227861240211236Sulfolobus solfataricus P2, complete genomeArsenite transport protein (arsB)6e-0755.8
NC_011832:619874:6395826395826408261245Candidatus Methanosphaerula palustris E1-9c, complete genomeCitrate transporter1e-0655.1
NC_016147:586433:5872725872725891431872Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative transmembrane transporter2e-0654.3
NC_007645:2779381:2819300281930028210391740Hahella chejuensis KCTC 2396, complete genomeDi- and tricarboxylate transporters2e-0653.9
NC_014844:659829:6635236635236648361314Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomesodium/sulphate symporter3e-0653.5
NC_002179:590000:5926695926695940811413Chlamydophila pneumoniae AR39, complete genomesodium:sulfate symporter family protein3e-0653.1
NC_004369:256262:2602102602102616971488Corynebacterium efficiens YS-314, complete genomehypothetical protein5e-0652.8
NC_015690:3477573:3519260351926035205521293Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYdfA6e-0652.4