Pre_GI: BLASTP Hits

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Query: NC_014328:4387303:4425896 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 4425896, End: 4426588, Length: 693

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011837:238160:266596266596267321726Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-70265
NC_009706:238160:266605266605267321717Clostridium kluyveri DSM 555 chromosome, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase2e-70265
NC_009698:3553365:355792635579263558630705Clostridium botulinum A str. Hall chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-58226
NC_009697:3659834:366081736608173661521705Clostridium botulinum A str. ATCC 19397 chromosome, completeN-acetylmuramoyl-L-alanine amidase1e-58226
NC_004557:2711702:272737227273722728097726Clostridium tetani E88, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase1e-53209
NC_010723:223935:274089274089274751663Clostridium botulinum E3 str. Alaska E43, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD6e-40164
NC_013316:120759:126866126866127618753Clostridium difficile R20291, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase1e-29129
NC_009089:117980:123166123166123870705Clostridium difficile 630, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase3e-29128
NC_019897:329945:329945329945330784840Thermobacillus composti KWC4 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD6e-27120
NC_014829:178000:178742178742179461720Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD2e-25115
NC_010001:4586000:459873045987304599443714Clostridium phytofermentans ISDg, complete genomecell wall hydrolase/autolysin8e-25114
NC_014220:2239594:224053722405372241220684Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD8e-24110
NC_016584:233486:254592254592255323732Desulfosporosinus orientis DSM 765 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase9e-24110
NC_016048:2055199:206947120694712070196726Oscillibacter valericigenes Sjm18-20, complete genomeputative N-acetylmuramoyl-L-alanine amidase7e-23107
NC_011898:851892:866523866523867272750Clostridium cellulolyticum H10, complete genomecell wall hydrolase/autolysin2e-22106
NC_016584:1583685:1586858158685815880421185Desulfosporosinus orientis DSM 765 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-22105
NC_019970:439969:455935455935456609675Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD6e-22104
NC_018704:176088:179814179814180518705Amphibacillus xylanus NBRC 15112, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase3e-21102
NC_014209:1910109:191010919101091910789681Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,N-acetylmuramoyl-L-alanine amidase CwlD3e-21101
NC_019978:686362:688393688393689076684Halobacteroides halobius DSM 5150, complete genomeN-acetylmuramoyl-L-alanine amidase4e-2098.2
NC_011567:139598:140106140106140804699Anoxybacillus flavithermus WK1, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1787.4
NC_010718:237962:241113241113241916804Natranaerobius thermophilus JW/NM-WN-LF, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1687
NC_015565:287900:331818331818332537720Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecell wall hydrolase/autolysin3e-1685.5
NC_017208:108134:149586149586150299714Bacillus thuringiensis serovar chinensis CT-43 chromosome, completespore-specific N-acetylmuramoyl-L-alanine amidase6e-1684.3
NC_014171:109280:147537147537148250714Bacillus thuringiensis BMB171 chromosome, complete genomespore-specific N-acetylmuramoyl-L-alanine amidase6e-1684.3
NC_014551:157418:157418157418158131714Bacillus amyloliquefaciens DSM 7, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1684.3
NC_004193:205278:209362209362210093732Oceanobacillus iheyensis HTE831, complete genomegermination specific N-acetylmuramoyl-L-alanine amidase1e-1583.2
NC_016047:2480921:248393824839382484552615Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeN-acetylmuramoyl-L-alanine amidase2e-1582.8
NC_003901:2727361:2729681272968127310541374Methanosarcina mazei Go1, complete genomecell surface protein3e-1582
NC_007604:2213659:2213659221365922147081050Synechococcus elongatus PCC 7942, complete genomeCell wall hydrolase/autolysin7e-1580.9
NC_014328:180482:1848201848201866311812Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative N-acetylmuramoyl-L-alanine amidase1e-1480.1
NC_016077:998741:105235210523521053323972Acidaminococcus intestini RyC-MR95 chromosome, complete genometranscriptional regulator2e-1479.3
NC_000964:3658000:3658149365814936596391491Bacillus subtilis subsp. subtilis str. 168, complete genomeN-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49)3e-1479
NC_016593:868500:8686788686788700241347Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeN-acetylmuramoyl-L-alanine amidase3e-1478.6
NC_011297:1167615:1185899118589911875631665Dictyoglomus thermophilum H-6-12, complete genomecell wall hydrolase/autolysin2e-1376.3
NC_008095:4669947:4670944467094446727431800Myxococcus xanthus DK 1622, complete genomeN-acetylmuramoyl-L-alanine amidase domain protein1e-1273.6
NC_015589:1630461:163505816350581635783726Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1272
NC_013161:3071105:3087095308709530888701776Cyanothece sp. PCC 8802, complete genomecell wall hydrolase/autolysin7e-1270.9
NC_011726:3205278:3209074320907432108491776Cyanothece sp. PCC 8801, complete genomecell wall hydrolase/autolysin7e-1270.9
NC_013316:1081044:1095797109579710978302034Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)2e-1169.7
NC_009089:1202261:1217070121707012191032034Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)2e-1169.7
NC_015520:3060495:306407430640743064778705Mahella australiensis 50-1 BON chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1168.9
NC_009089:1202261:1214547121454712165862040Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)3e-1168.9
NC_014652:801653:831651831651832199549Caldicellulosiruptor hydrothermalis 108 chromosome, completecell wall hydrolase/autolysin3e-1168.6
NC_012926:727716:7307667307667335732808Streptococcus suis BM407 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1168.6
NC_013316:1081044:1093266109326610953052040Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)3e-1168.6
NC_009442:1216355:1234262123426212373693108Streptococcus suis 05ZYH33 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase5e-1168.2
NC_012925:1125876:1145568114556811486753108Streptococcus suis P1/7, complete genomeN-acetylmuramoyl-L-alanine amidase5e-1168.2
NC_014328:4249032:426661242666124267328717Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-1167.8
NC_007644:1293701:131535413153541316082729Moorella thermoacetica ATCC 39073, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1065.9
NC_001263:1378605:1392928139292813940431116Deinococcus radiodurans R1 chromosome 1, complete sequenceN-acetylmuramoyl-L-alanine amidase, putative7e-1063.9
NC_008148:2290806:2308321230832123093971077Rubrobacter xylanophilus DSM 9941, complete genomecell wall hydrolase/autolysin2e-0962.8
NC_016627:2870900:2888618288861828896881071Clostridium clariflavum DSM 19732 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-0961.6
NC_020126:2883194:288603228860322886841810Myxococcus stipitatus DSM 14675, complete genomeN-acetylmuramoyl-L-alanine amidase2e-0859.3
NC_018664:1573925:158825715882571589231975Clostridium acidurici 9a chromosome, complete genomeputative cell wall amidase LytH1e-0756.6
NC_004337:2548288:254828825482882549157870Shigella flexneri 2a str. 301, complete genomeN-acetylmuramoyl-l-alanine amidase I1e-0756.6
NC_004741:2526421:252642125264212527290870Shigella flexneri 2a str. 2457T, complete genomeN-acetylmuramoyl-l-alanine amidase I1e-0756.6
NC_010424:1563033:1592155159215515944102256Candidatus Desulforudis audaxviator MP104C, complete genomeN-acetylmuramoyl-L-alanine amidase2e-0756.6
NC_009922:315870:3336633336633350961434Alkaliphilus oremlandii OhILAs, complete genomeSpoIID/LytB domain2e-0755.8
NC_012691:2614603:2614603261460326161981596Tolumonas auensis DSM 9187, complete genomeN-acetylmuramoyl-L-alanine amidase4e-0755.1
NC_010519:1802294:1802294180229418035021209Haemophilus somnus 2336 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-0755.1
NC_009654:2958316:2979555297955529808831329Marinomonas sp. MWYL1, complete genomeN-acetylmuramoyl-L-alanine amidase5e-0754.7
NC_016751:1623756:1642310164231016436831374Marinitoga piezophila KA3 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-0754.7
NC_004342:3370310:3393746339374633948371092Leptospira interrogans serovar Lai str. 56601 chromosome I,N-acetylmuramoyl-L-alanine amidase2e-0652.4
NC_007760:3848190:387012238701223870871750Anaeromyxobacter dehalogenans 2CP-C, complete genomeN-acetylmuramoyl-L-alanine amidase2e-0652.4
NC_009328:2905000:292383329238332924537705Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-0652.4
NC_014973:1941500:1960295196029519615721278Geobacter sp. M18 chromosome, complete genomecell wall hydrolase/autolysin3e-0652.4
NC_010718:2460893:247263324726332473553921Natranaerobius thermophilus JW/NM-WN-LF, complete genomecell wall hydrolase/autolysin8e-0650.8