Pre_GI: BLASTP Hits

Some Help

Query: NC_014323:2680085:2710670 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 2710670, End: 2711488, Length: 819

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017516:364404:384318384318385052735Neisseria meningitidis H44/76 chromosome, complete genomeCarD family transcriptional regulator3e-36152
NC_003112:364869:383368383368384102735Neisseria meningitidis MC58, complete genometranscriptional regulator, Crp/Fnr family3e-36152
NC_009379:435404:451156451156451926771Polynucleobacter sp. QLW-P1DMWA-1, complete genomeputative transcriptional regulator, Crp/Fnr family1e-35150
NC_017515:372487:392257392257392991735Neisseria meningitidis M04-240196 chromosome, complete genomeCarD family transcriptional regulator1e-35150
NC_014541:2122788:214288821428882143640753Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, Crp/Fnr family4e-35148
NC_016513:1568401:158001815800181580791774Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completefumarate/nitrate reduction transcriptional regulator2e-33142
NC_013416:1246880:125844412584441259217774Aggregatibacter actinomycetemcomitans D11S-1, complete genometranscriptional activator protein anr2e-33142
NC_012214:1974500:201414020141402014895756Erwinia pyrifoliae Ep1/96, complete genomeFumarate and nitrate reduction regulatory protein3e-33142
NC_010676:304405:322022322022322678657Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, Crp/Fnr family6e-33141
NC_009052:2512373:255438425543842555136753Shewanella baltica OS155, complete genomeputative transcriptional regulator, Crp/Fnr family4e-33141
NC_011149:1429523:144800414480041448756753Salmonella enterica subsp. enterica serovar Agona str. SL483,fumarate and nitrate reduction regulatory protein1e-32140
NC_011080:1750000:175072917507291751481753Salmonella enterica subsp. enterica serovar Newport str. SL254,fumarate and nitrate reduction regulatory protein1e-32140
NC_003197:1753663:175437417543741755126753Salmonella typhimurium LT2, complete genometranscriptional regulator1e-32140
NC_011094:1726000:172755417275541728306753Salmonella enterica subsp. enterica serovar Schwarzengrund strfumarate/nitrate reduction transcriptional regulator1e-32140
NC_016810:1709695:171122717112271711979753Salmonella enterica subsp. enterica serovar Typhimurium strfumarate and nitrate reduction regulatory protein1e-32140
NC_016856:1763640:176435117643511765103753Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sfumarate/nitrate reduction transcriptional regulator1e-32140
NC_016857:1709695:171122717112271711979753Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Fumarate and nitrate reduction regulatory protein1e-32140
NC_016860:1752000:175206517520651752817753Salmonella enterica subsp. enterica serovar Typhimurium strfumarate/nitrate reduction transcriptional regulator1e-32140
NC_017046:1709578:171111017111101711862753Salmonella enterica subsp. enterica serovar Typhimurium str. 798fumarate and nitrate reduction regulatory protein1e-32140
NC_006511:1273162:129164612916461292440795Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCfumarate and nitrate reduction regulatory protein1e-32140
NC_011147:1267005:128548912854891286283795Salmonella enterica subsp. enterica serovar Paratyphi A strfumarate/nitrate reduction transcriptional regulator1e-32140
NC_016863:1711832:171250117125011713295795Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1fumarate/nitrate reduction transcriptional regulator1e-32140
NC_008027:1847040:187215418721541872888735Pseudomonas entomophila L48, complete genometranscriptional regulator Anr1e-32140
NC_009092:2282437:230490623049062305655750Shewanella loihica PV-4, complete genometranscriptional regulator, Crp/Fnr family8e-33140
NC_012913:772641:781906781906782679774Aggregatibacter aphrophilus NJ8700, complete genometranscriptional activator protein anr8e-33140
NC_008258:1873805:187380518738051874557753Shigella flexneri 5 str. 8401, complete genomeFumarate and nitrate reduction Regulatory protein8e-33140
NC_009792:1345500:136427313642731365103831Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-32139
NC_006905:1766000:176744717674471768292846Salmonella enterica subsp. enterica serovar Choleraesuis strtranscriptional regulation of aerobic, anaerobic respiration, osmotic balance (CRP family)1e-32139
NC_015761:1630000:164667116466711647465795Salmonella bongori NCTC 12419, complete genomefumarate and nitrate reduction regulatory protein1e-32139
NC_003198:1336894:135538713553871356181795Salmonella enterica subsp. enterica serovar Typhi str. CT18,fumarate and nitrate reduction regulatory protein4e-32138
NC_004631:1623511:162500116250011625795795Salmonella enterica subsp. enterica serovar Typhi Ty2, completefumarate and nitrate reduction regulatory protein4e-32138
NC_008702:1432952:146890714689071469707801Azoarcus sp. BH72, complete genomeprobable fumarate and nitrate reduction regulatory protein7e-32137
NC_007298:1129889:114843611484361149179744Dechloromonas aromatica RCB, complete genomeCyclic nucleotide-binding:Bacterial regulatory protein, Crp3e-31135
NC_009075:15017:440874408744842756Burkholderia pseudomallei 668 chromosome II, complete sequencecAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases9e-31134
NC_012560:1965251:197783819778381978572735Azotobacter vinelandii DJ, complete genomeFnr-like negative transcriptional regulator of CydAB1e-30133
NC_021150:1965264:197785119778511978585735Azotobacter vinelandii CA6, complete genomeFnr-like negative transcriptional regulator of CydAB1e-30133
NC_007347:1215358:123856512385651239350786Ralstonia eutropha JMP134 chromosome 1, complete sequenceCyclic nucleotide-binding:Bacterial regulatory protein, Crp2e-30132
NC_014118:1528851:153062115306211531277657Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, Crp/Fnr family4e-29128
NC_015422:1163752:117589611758961176639744Alicycliphilus denitrificans K601 chromosome, complete genomeCrp/Fnr family transcriptional regulator8e-29127
NC_014910:3458475:346770834677083468451744Alicycliphilus denitrificans BC chromosome, complete genomecyclic nucleotide-binding protein8e-29127
NC_015731:3658956:367863236786323679384753Nitrosomonas sp. Is79A3 chromosome, complete genomeCrp/Fnr family transcriptional regulator8e-29127
NC_008782:1136732:114535311453531146096744Acidovorax sp. JS42, complete genomeputative transcriptional regulator, Crp/Fnr family2e-28126
NC_011992:1038985:104761010476101048338729Acidovorax ebreus TPSY, complete genometranscriptional regulator, Crp/Fnr family2e-28126
NC_007973:1821753:183254218325421833276735Ralstonia metallidurans CH34 chromosome 1, complete sequencetranscriptional regulator, Crp/Fnr family3e-27122
NC_009254:745706:752178752178753053876Burkholderia vietnamiensis G4 chromosome 3, complete sequenceCRP/FNR family transcriptional regulator1e-26120
NC_003295:199354:211194211194211994801Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN3e-26119
NC_014532:722151:734320734320735051732Halomonas elongata DSM 2581, complete genometranscriptional regulator Anr1e-24113
NC_010688:2400471:242659224265922427353762Xanthomonas campestris pv. campestris, complete genomeTranscriptional regulator, Crp/Fnr family6e-1891.7
NC_006677:1052031:107268610726861073408723Gluconobacter oxydans 621H, complete genomeTranscriptional regulator AadR (cyclic AMP receptor protein)4e-1685.1
NC_011894:3988500:400338440033844004100717Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family4e-1582
NC_011894:5056901:510326151032615103977717Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family4e-1582
NC_007643:3799425:383194738319473832735789Rhodospirillum rubrum ATCC 11170, complete genomeTranscriptional Regulator, Crp/Fnr family8e-1580.9
NC_007952:444616:451579451579452328750Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, Crp/Fnr family2e-1376.3
NC_013209:2759160:277893527789352779747813Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator cAMP-binding AadR/Crp/Fnr9e-1064.3
NC_010610:1649500:166446916644691665119651Lactobacillus fermentum IFO 3956, complete genometranscriptional regulator9e-1064.3
NC_015681:102000:116429116429117118690Thermodesulfatator indicus DSM 15286 chromosome, complete genomeCrp/Fnr family transcriptional regulator2e-0963.5
NC_015850:1614965:162652416265241627255732Acidithiobacillus caldus SM-1 chromosome, complete genomeCrp/Fnr family transcriptional regulator6e-0961.6
NC_007964:2152000:216817021681702168865696Nitrobacter hamburgensis X14, complete genometranscriptional regulator, Crp/Fnr family2e-0860.1
NC_010511:6711836:671476367147636715446684Methylobacterium sp. 4-46 chromosome, complete genomeCrp/FNR family transcriptional regulator9e-0857.8
NC_011894:5468500:546963554696355470327693Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family9e-0857.8
NC_015065:232240:237865237865238641777Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequencetranscriptional regulator, Crp/Fnr family1e-0757
NC_017030:8599515:860775686077568608346591Corallococcus coralloides DSM 2259 chromosome, complete genomecyclic nucleotide-binding domain-containing protein2e-0756.2
NC_004463:2262467:228840322884032289197795Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulator FixK4e-0755.5
NC_015914:111382:112859112859113494636Cyclobacterium marinum DSM 745 chromosome, complete genomeputative Crp/Fnr family transcriptional regulator4e-0755.5
NC_020409:437781:497477497477498151675Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTranscriptional regulator, Crp/Fnr family3e-0755.5
NC_008699:1673181:171828917182891718996708Nocardioides sp. JS614, complete genomecyclic nucleotide-binding8e-0754.7
NC_012440:1405879:141651514165151417198684Persephonella marina EX-H1, complete genometranscriptional regulator8e-0754.3
NC_011894:6259649:627470162747016275444744Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family8e-0754.3
NC_012988:4387735:441080344108034411414612Methylobacterium extorquens DM4, complete genomenitric oxide responsive transcriptional regulator NnrR, Crp/Fnr family1e-0653.5
NC_007930:50801:665926659267296705Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,Transcriptional regulator, crp family2e-0652.8
NC_016052:2335648:234916823491682349875708Tetragenococcus halophilus NBRC 12172, complete genomeFNR-like protein FLP3e-0652.4
NC_012483:483425:523534523534524220687Acidobacterium capsulatum ATCC 51196, complete genometranscriptional regulator, Crp/Fnr family6e-0651.6
NC_009483:2640403:268419626841962684897702Geobacter uraniireducens Rf4 chromosome, complete genomeCRP/FNR family transcriptional regulator8e-0651.2