Pre_GI: BLASTP Hits

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Query: NC_013716:1178383:1190611 Citrobacter rodentium ICC168, complete genome

Start: 1190611, End: 1191600, Length: 990

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011601:3338888:335027833502783351267990Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS secreted effector NleB-like protein2e-175615
NC_013364:5083949:509993050999305100919990Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleB-like protein2e-175615
NC_013364:3701895:371272737127273713716990Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleB2e-175615
NC_013008:3911356:392273739227373923726990Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector1e-174612
NC_011353:3956630:396801139680113969000990Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeNleB1e-174612
NC_002655:3919545:393092739309273931916990Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-174612
NC_002695:3852233:386361438636143864603990Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-174612
AP010958:5090696:510731651073165108305990Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleB-like protein2e-174611
AP010958:3627355:363873536387353639724990Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleB-like protein2e-174611
NC_013353:3627355:363873536387353639724990Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleB2e-174611
NC_013353:5090696:510731651073165108305990Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleB-like protein2e-174611
NC_013941:338121:348406348406349386981Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeNleB1e-116419
NC_002695:917509:924621924621925601981Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-114411
AP010958:2272919:228557122855712286551981Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleB-like protein4e-114411
NC_002655:919654:926272926272927252981Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933K4e-114411
NC_011353:921500:927986927986928966981Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenon-LEE-encoded effector NleB4e-114411
NC_011601:1077548:108534310853431086323981Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS effector-like protein NleB-like protein4e-114411
NC_013008:918215:929579929579930559981Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector4e-114411
NC_013353:2272919:228557122855712286551981Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleB4e-114411
NC_013941:1014386:102165210216521022632981Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeNleB4e-114411
NC_013353:867869:874459874459875439981Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleB4e-114410
AP010958:867869:874459874459875439981Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleB-homolog4e-114410
NC_011294:2009388:2019221201922120202281008Salmonella enterica subsp. enterica serovar Enteritidis strphage protein8e-97353
NC_016810:2027311:2040503204050320415101008Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage protein8e-97353
NC_016856:2085283:2094340209434020953471008Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein8e-97353
NC_016857:2027311:2040503204050320415101008Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein8e-97353
NC_016863:2029340:2042532204253220435391008Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein8e-97353
NC_017046:2026672:2039864203986420408711008Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein8e-97353
NC_011205:2137696:2147528214752821485351008Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-97353