Pre_GI: BLASTP Hits

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Query: NC_013315:2505792:2526835 Clostridium difficile CD196 chromosome, complete genome

Start: 2526835, End: 2528973, Length: 2139

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013316:2585666:2607391260739126095292139Clostridium difficile R20291, complete genomeputative transcription antiterminator01273
NC_017179:2513804:2534847253484725369762130Clostridium difficile BI1, complete genomeputative transcription antiterminator01271
NC_014377:1985714:1997875199787519999622088Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional antiterminator, BglG family1e-86321
NC_011899:2165814:2173706217370621759312226Halothermothrix orenii H 168, complete genometranscriptional antiterminator, BglG6e-60232
NC_014377:532816:5554125554125573791968Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional antiterminator, BglG1e-47192
NC_012121:1676367:1676367167636716784002034Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein2e-47191
NC_009617:263060:2782072782072802582052Clostridium beijerinckii NCIMB 8052 chromosome, complete genometranscriptional antiterminator BglG3e-43177
NC_017341:2303005:2304578230457823067102133Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,transcriptional antiterminator, BglG family/DNA-binding protein4e-42173
NC_002951:2208813:2210386221038622125182133Staphylococcus aureus subsp. aureus COL, complete genometranscriptional antiterminator, BglG family/DNA-binding protein4e-42173
NC_020272:1384525:1384525138452513864771953Bacillus amyloliquefaciens IT-45, complete genomeputative licABCH operon regulator4e-42173
NC_019842:2575000:2592489259248925944411953Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,licABCH operon regulator5e-42173
NC_017191:2514401:2531358253135825333101953Bacillus amyloliquefaciens XH7 chromosome, complete genomemannose operon transcriptional antiterminator2e-41171
NC_017188:2512357:2529314252931425312661953Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional antiterminator2e-41171
NC_009725:2517428:2538466253846625404181953Bacillus amyloliquefaciens FZB42, complete genomeManR4e-41170
NC_017195:1230485:1247625124762512495711947Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeHTH domain family2e-39164
NC_020244:1264500:1273750127375012756961947Bacillus subtilis XF-1, complete genometranscriptional regulator1e-38161
NC_014976:3469395:3483227348322734851731947Bacillus subtilis BSn5 chromosome, complete genometranscriptional antiterminator1e-37158
NC_014831:1843835:1874104187410418760741971Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional antiterminator, BglG6e-35149
NC_008600:5005345:5019631501963150215861956Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator2e-34148
NC_011601:4096427:4096427409642740979801554Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometranscriptional antiterminator7e-34146
NC_016779:4969626:4983899498389949858451947Bacillus cereus F837/76 chromosome, complete genomeBglG family transcriptional antiterminator4e-34146
NC_008253:3941938:3941938394193839434911554Escherichia coli 536, complete genomeputative transcriptional antiterminator9e-34145
NC_010498:4072681:4075489407548940770421554Escherichia coli SMS-3-5, complete genomeputative PTS regulatory protein1e-33145
NC_011660:2175537:2196185219618521981221938Listeria monocytogenes HCC23 chromosome, complete genomePRD/PTS system IIA 2 domain protein2e-33144
NC_012472:5015621:5029907502990750318531947Bacillus cereus 03BB102, complete genometranscriptional regulator2e-33144
NC_011969:4945441:4961027496102749629731947Bacillus cereus Q1 chromosome, complete genomemanr8e-33142
NC_014650:1410790:1421157142115714230731917Geobacillus sp. Y4.1MC1 chromosome, complete genometranscriptional antiterminator BglG4e-31137
NC_016023:729843:7367687367687386871920Bacillus coagulans 36D1 chromosome, complete genomePTS modulated transcriptional regulator, MtlR family7e-30132
NC_015634:526889:5354975354975374161920Bacillus coagulans 2-6 chromosome, complete genomePTS modulated transcriptional regulator, MtlR family3e-28127
NC_013411:2975364:2987715298771529898592145Geobacillus sp. Y412MC61, complete genomePTS modulated transcriptional regulator, MtlR family7e-24112
NC_014915:2092678:2127646212764621297902145Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional antiterminator, BglG7e-24112
NC_013198:394000:3992113992114006951485Lactobacillus rhamnosus GG, complete genomeDNA-binding/PRD domain protein9e-24112
NC_006510:2044347:2064172206417220662262055Geobacillus kaustophilus HTA426, complete genomehypothetical protein4e-22107
NC_003210:403743:4241304241304260641935Listeria monocytogenes EGD-e, complete genomehypothetical protein5e-22106
NC_013768:418000:4384014384014403351935Listeria monocytogenes 08-5923, complete genomehypothetical protein8e-22105
NC_013766:417991:4383804383804403141935Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein8e-22105
NC_014376:2766326:2772039277203927740752037Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional antiterminator, BglG1e-21105
NC_014650:2417509:2429312242931224313902079Geobacillus sp. Y4.1MC1 chromosome, complete genometranscriptional antiterminator BglG7e-2099.8
NC_016012:665171:6812096812096832362028Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeputative PRD domain-containing protein8e-1996.3
NC_014376:6296:90379037109561920Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional antiterminator, BglG2e-1895.1
NC_015687:1478668:150180815018081502671864Clostridium acetobutylicum DSM 1731 chromosome, complete genomeBglG family transcriptional antiterminator6e-1893.2
NC_008261:64678:777267772678574849Clostridium perfringens ATCC 13124, complete genometranscription antiterminator8e-1892.8
NC_008262:101731:113027113027113875849Clostridium perfringens SM101, complete genomeSACPA operon antiterminator (sacT)9e-1892.8
NC_014334:369974:3699743699743720702097Lactobacillus casei str. Zhang chromosome, complete genometranscriptional antiterminator and PtS system component IIA1e-1792.4
NC_015690:7334786:733841373384137339285873Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional antiterminator, BglG3e-1687.4
NC_016935:7426389:742849374284937429365873Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional antiterminator BglG3e-1687.4
NC_017316:2710021:2711057271105727129191863Enterococcus faecalis OG1RF chromosome, complete genomeputative transcriptional activator SrlM3e-1687.4
NC_004668:3184319:3189426318942631912881863Enterococcus faecalis V583, complete genomeputative transcriptional activator SrlM3e-1687.4
NC_015391:2449927:2454436245443624563641929Carnobacterium sp. 17-4 chromosome, complete genomelicABCH operon regulator4e-1687
NC_013517:1849912:1857393185739318594892097Sebaldella termitidis ATCC 33386, complete genometranscriptional antiterminator, BglG8e-1686.3
NC_014829:3822125:384634438463443847177834Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional antiterminator, BglG9e-1685.9
NC_006582:1017000:1025418102541810274872070Bacillus clausii KSM-K16, complete genometranscriptional antiterminator, BglG family1e-1585.9
NC_021182:2921000:294752729475272948363837Clostridium pasteurianum BC1, complete genometranscriptional antiterminator3e-1584.3
NC_016641:2291363:2303197230319723051041908Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional antiterminator BglG6e-1583.2
NC_012914:2360989:238471723847172385577861Paenibacillus sp. JDR-2, complete genometranscriptional antiterminator, BglG6e-1583.2
NC_013517:1529765:1539280153928015413342055Sebaldella termitidis ATCC 33386, complete genometranscriptional antiterminator, BglG8e-1479.7
NC_021171:4588792:4633997463399746361052109Bacillus sp. 1NLA3E, complete genomeputative transcriptional regulator1e-1379
NC_019970:2263427:226979822697982270622825Thermoanaerobacterium thermosaccharolyticum M0795, complete genometranscriptional antiterminator3e-1377.8
NC_015555:1989463:199786819978681998704837Thermoanaerobacterium xylanolyticum LX-11 chromosome, completetranscriptional antiterminator, BglG1e-1275.9
NC_002662:30922:3092230922328591938Lactococcus lactis subsp. lactis Il1403, complete genomeLysR family transcription regulator1e-1275.5
NC_003212:2814737:2831836283183628339052070Listeria innocua Clip11262, complete genomehypothetical protein2e-1275.1
NC_008555:2628858:2645933264593326480022070Listeria welshimeri serovar 6b str. SLCC5334, complete genomePTS system, IIA 2 domain protein4e-1273.9
NC_003210:2721559:2740888274088827429572070Listeria monocytogenes EGD-e, complete genomehypothetical protein4e-1273.6
NC_012926:140000:1749081749081769502043Streptococcus suis BM407 chromosome, complete genomePTS multi-domain regulator8e-1272.8
NC_020995:789665:8061888061888081221935Enterococcus casseliflavus EC20, complete genomehypothetical protein9e-1272.8
NC_008555:2628858:2628858262885826309242067Listeria welshimeri serovar 6b str. SLCC5334, complete genomePTS system, IIA component, putative2e-1172
NC_002570:207555:2096912096912117422052Bacillus halodurans C-125, complete genomehypothetical protein2e-1171.6
NC_003210:2721559:2723786272378627258522067Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-1171.6
NC_016641:373623:3840913840913860821992Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional antiterminator4e-1170.5
NC_006177:1060428:1065806106580610677341929Symbiobacterium thermophilum IAM 14863, complete genometranscription antiterminator BglG family4e-1170.5
NC_003212:2814737:2814737281473728168032067Listeria innocua Clip11262, complete genomehypothetical protein2e-1068.6
NC_014363:427393:4330524330524351542103Olsenella uli DSM 7084 chromosome, complete genometranscriptional antiterminator, BglG2e-1067.8
NC_016047:2658000:266550526655052666353849Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetranscription antiterminator3e-1067.4
NC_014376:1586649:1606810160681016087291920Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional antiterminator, BglG1e-0965.5
NC_012467:1997484:1999131199913120011612031Streptococcus pneumoniae P1031, complete genometranscriptional regulator, BglG family protein1e-0965.5
NC_014479:3825195:382519538251953826028834Bacillus subtilis subsp. spizizenii str. W23 chromosome, completetranscriptional antiterminator (BglG family) protein1e-0965.5
NC_015389:1977736:1981635198163519836231989Coriobacterium glomerans PW2 chromosome, complete genometranscriptional antiterminator, BglG3e-0964.3
NC_016023:1725294:172529417252941726139846Bacillus coagulans 36D1 chromosome, complete genometranscriptional antiterminator BglG4e-0963.9
NC_010723:3395187:342819634281963429050855Clostridium botulinum E3 str. Alaska E43, complete genometranscription antiterminator LicT5e-0963.5
NC_013956:2592378:2594311259431125962181908Pantoea ananatis LMG 20103 chromosome, complete genomeLicR2e-0862
NC_019842:3755275:375756437575643758391828Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,LicT2e-0861.2
NC_020291:1045058:106055510605551061400846Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscription antiterminator3e-0860.8
NC_014624:1675500:1756400175640017584752076Eubacterium limosum KIST612 chromosome, complete genometranscriptional antiterminator4e-0860.8
NC_017195:1411936:143385414338541434720867Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscription antiterminator, GlcT1e-0758.9
NC_016641:373623:402726402726403562837Paenibacillus terrae HPL-003 chromosome, complete genometranscription antiterminator LicT1e-0758.9
NC_009004:25988:2837728377303111935Lactococcus lactis subsp. cremoris MG1363, complete genometranscriptional regulator mtl operon mtlR4e-0757.4
NC_017316:203233:221668221668222438771Enterococcus faecalis OG1RF chromosome, complete genometranscription antiterminator LicT4e-0757.4
NC_003909:4854379:4898801489880149004531653Bacillus cereus ATCC 10987, complete genometranscription antiterminator, BglG family5e-0757
NC_012880:1613485:161539716153971616227831Dickeya dadantii Ech703, complete genometranscriptional antiterminator, BglG5e-0757
NC_019978:2532640:2552799255279925555342736Halobacteroides halobius DSM 5150, complete genometranscriptional antiterminator8e-0756.2
NC_005945:4898841:4926015492601549286902676Bacillus anthracis str. Sterne, complete genometranscription antiterminator, BglG family1e-0655.8
NC_016641:3173250:319145331914533192286834Paenibacillus terrae HPL-003 chromosome, complete genomebglg family transcriptional antiterminator1e-0655.8
NC_008800:2298000:230718223071822308015834Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,beta-glucoside operon antiterminator2e-0655.1
NC_013515:1483471:148532414853241486163840Streptobacillus moniliformis DSM 12112, complete genometranscriptional antiterminator, BglG3e-0654.7
NC_014377:1400544:1412036141203614149962961Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system transcriptional activator3e-0654.3
NC_010498:3023442:303530630353063036130825Escherichia coli SMS-3-5, complete genomeputative transcriptional antiterminator3e-0654.3
NC_021182:1045218:105904110590411059946906Clostridium pasteurianum BC1, complete genometranscriptional antiterminator4e-0653.9
NC_014622:1514416:153176415317641532597834Paenibacillus polymyxa SC2 chromosome, complete genomebglg family transcriptional antiterminator4e-0653.9
NC_006270:4014000:403209640320964032929834Bacillus licheniformis ATCC 14580, complete genometranscriptional antiterminator4e-0653.9
NC_014624:2996377:301194630119463012770825Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein5e-0653.5
NC_016641:3272500:329680632968063297744939Paenibacillus terrae HPL-003 chromosome, complete genomeBigG family transcription antiterminator5e-0653.5
NC_011745:3197584:320944732094473210328882Escherichia coli ED1a chromosome, complete genomeputative transcription antiterminator7e-0653.1
NC_011742:3057444:306899030689903069871882Escherichia coli S88 chromosome, complete genometranscription antiterminator7e-0653.1
NC_008253:2965573:297730929773092978133825Escherichia coli 536, complete genomeputative transcriptional antiterminator protein8e-0653.1
NC_015601:1463500:146531814653181466166849Erysipelothrix rhusiopathiae str. Fujisawa, complete genometranscriptional antiterminator, BglG8e-0652.8