Pre_GI: BLASTP Hits

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Query: NC_013199:2386924:2402305 Lactobacillus rhamnosus Lc 705, complete genome

Start: 2402305, End: 2403537, Length: 1233

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010999:2483000:2494893249489324961251233Lactobacillus casei, complete genomePermeases of the major facilitator superfamily0695
NC_015172:1002872:1005451100545110066681218Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomemajor facilitator superfamily MFS_14e-67255
NC_007907:4926548:4941947494194749431911245Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-58227
NC_010162:6562571:6578627657862765800091383Sorangium cellulosum 'So ce 56', complete genomemajor facilitator superfamily permease9e-56218
NC_008536:4921224:4935578493557849368041227Solibacter usitatus Ellin6076, complete genomemajor facilitator superfamily MFS_13e-53209
NC_003888:4750489:4751293475129347526721380Streptomyces coelicolor A3(2), complete genomeintegral membrane efflux protein2e-50200
NC_019673:526000:5468565468565481811326Saccharothrix espanaensis DSM 44229 complete genomePermease, MFS-type1e-46187
NC_014151:813755:8364008364008377701371Cellulomonas flavigena DSM 20109 chromosome, complete genomemajor facilitator superfamily MFS_15e-45182
NC_015856:3675592:3690769369076936920911323Collimonas fungivorans Ter331 chromosome, complete genomemajor facilitator superfamily (MFS) multidrug efflux pump7e-45181
NC_013093:2230171:2247241224724122485511311Actinosynnema mirum DSM 43827, complete genomemajor facilitator superfamily MFS_14e-44179
NC_011059:65414:8983789837911651329Prosthecochloris aestuarii DSM 271, complete genomemajor facilitator superfamily MFS_15e-44179
NC_013851:3166969:3187515318751531887471233Allochromatium vinosum DSM 180 chromosome, complete genomemajor facilitator superfamily MFS_12e-42173
NC_006087:1334500:1339381133938113407271347Leifsonia xyli subsp. xyli str. CTCB07, complete genomeintegral membrane efflux protein6e-39162
NC_007298:1759881:1805629180562918069361308Dechloromonas aromatica RCB, complete genomeProtein of unknown function DUF894, DitE:Major facilitator superfamily MFS_11e-38161
NC_011894:4360577:4368380436838043695941215Methylobacterium nodulans ORS 2060, complete genomemajor facilitator superfamily MFS_15e-38159
NC_006177:2943259:2948439294843929496741236Symbiobacterium thermophilum IAM 14863, complete genomeputative transporter3e-34146
NC_015580:3834244:3855475385547538567641290Novosphingobium sp. PP1Y, complete genomehypothetical protein8e-26118
NC_015711:2050360:2071006207100620722591254Myxococcus fulvus HW-1 chromosome, complete genomemajor facilitator transporter6e-26118
NC_015733:1976752:1998821199882120000021182Pseudomonas putida S16 chromosome, complete genomeputative transport-related membrane protein1e-25117
NC_013524:392089:3945533945533958481296Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomemajor facilitator superfamily MFS_12e-24114
NC_015510:1096755:1111213111121311125681356Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomemajor facilitator superfamily protein6e-24112
NC_015723:280368:2967992967992984121614Cupriavidus necator N-1 chromosome 2, complete sequencemajor facilitator superfamily protein2e-23110
NC_008061:2773670:2775990277599027772281239Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencemajor facilitator superfamily MFS_16e-23108
NC_008543:2474002:2489779248977924910171239Burkholderia cenocepacia HI2424 chromosome 2, complete sequencemajor facilitator superfamily MFS_16e-23108
NC_010515:1900967:1903287190328719045251239Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencemajor facilitator superfamily MFS_16e-23108
NC_007908:1010162:1021985102198510232111227Rhodoferax ferrireducens T118, complete genomemajor facilitator superfamily MFS_11e-22107
NC_014931:1044313:1069023106902310706031581Variovorax paradoxus EPS chromosome, complete genomeprotein of unknown function DUF894 DitE1e-22107
NC_016906:4562874:4584001458400145855751575Gordonia polyisoprenivorans VH2 chromosome, complete genomemajor facilitator superfamily transporter4e-21102
NC_011894:3885490:3887586388758638888241239Methylobacterium nodulans ORS 2060, complete genomemajor facilitator superfamily MFS_18e-21101
NC_012483:3529895:3546790354679035481091320Acidobacterium capsulatum ATCC 51196, complete genometransporter, major facilitator family1e-20101
NC_017025:283182:2875292875292887851257Flavobacterium indicum GPTSA100-9, complete genomeMajor facilitator superfamily (MFS) permease2e-20100
NC_010655:1808657:1808657180865718099071251Akkermansia muciniphila ATCC BAA-835, complete genomemajor facilitator superfamily MFS_12e-20100
NC_015566:3269469:3286994328699432886221629Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-20100
NC_013525:556036:5726215726215738831263Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomemajor facilitator superfamily MFS_15e-2099
NC_019973:5838000:5851133585113358527571625Mesorhizobium australicum WSM2073, complete genome5e-1995.9
NC_015675:6464000:6476844647684464784681625Mesorhizobium opportunistum WSM2075 chromosome, complete genome5e-1995.9
NC_014923:5909000:5922173592217359238431671Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeprotein of unknown function DUF894 DitE6e-1995.5
NC_017955:3545626:3563884356388435655241641Modestobacter marinus, complete genometransporter9e-1995.1
NC_014923:5765660:5765660576566057673061647Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeprotein of unknown function DUF894 DitE1e-1894.7
NC_015675:6276357:6320331632033163219771647Mesorhizobium opportunistum WSM2075 chromosome, complete genomehypothetical protein1e-1894.7
NC_019973:5694620:5694620569462056962661647Mesorhizobium australicum WSM2073, complete genomearabinose efflux permease family protein1e-1894.7
NC_017093:8518961:8534401853440185356241224Actinoplanes missouriensis 431, complete genomeputative MFS transporter1e-1894.4
NC_009439:4734237:4754199475419947554431245Pseudomonas mendocina ymp, complete genomemajor facilitator transporter2e-1894
NC_013592:1056500:1073143107314310743631221Dickeya dadantii Ech586, complete genomemajor facilitator superfamily MFS_12e-1790.5
NC_003047:3360000:3391946339194633935891644Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN4e-1789.7
NC_002678:5060670:5099683509968351013291647Mesorhizobium loti MAFF303099, complete genomeputative transporter5e-1789
NC_019757:1789237:1789237178923717905591323Cylindrospermum stagnale PCC 7417, complete genomearabinose efflux permease family protein8e-1788.6
NC_016111:5369414:5383447538344753848021356Streptomyces cattleya NRRL 8057, complete genomeMajor facilitator superfamily MFS_19e-1788.2
NC_012880:3421500:3426826342682634280941269Dickeya dadantii Ech703, complete genomemajor facilitator superfamily MFS_12e-1687
NC_003296:1461538:1482844148284414841181275Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSMEMBRANE PROTEIN3e-1686.7
NC_008781:654289:6748096748096764191611Polaromonas naphthalenivorans CJ2, complete genomeprotein of unknown function DUF894, DitE4e-1686.3
NC_008314:2744553:2782936278293627841381203Ralstonia eutropha H16 chromosome 2, complete sequencePutative MFS transporter5e-1685.9
NC_015065:18189:1818918189195201332Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequencemajor facilitator superfamily MFS_18e-1685.1
NC_008278:6885254:6928181692818169294641284Frankia alni ACN14a, complete genomehypothetical protein2e-1584.3
NC_021177:2241647:2244553224455322458151263Streptomyces fulvissimus DSM 40593, complete genomeMajor facilitator superfamily MFS_11e-1584.3
NC_014206:2516000:2539740253974025409601221Geobacillus sp. C56-T3 chromosome, complete genomemajor facilitator superfamily protein3e-1583.2
NC_014915:1080793:1091409109140910926291221Geobacillus sp. Y412MC52 chromosome, complete genomemajor facilitator superfamily MFS_13e-1583.2
NC_013411:1941762:1951465195146519526851221Geobacillus sp. Y412MC61, complete genomemajor facilitator superfamily MFS_13e-1583.2
NC_014168:56728:6843468434697201287Segniliparus rotundus DSM 44985 chromosome, complete genomemajor facilitator superfamily protein7e-1582
NC_003155:3913789:3932261393226139335531293Streptomyces avermitilis MA-4680, complete genomeexport protein7e-1582
NC_010545:1729161:1731853173185317331871335Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein2e-1480.9
NC_009921:5681677:5699321569932157006521332Frankia sp. EAN1pec, complete genomemajor facilitator superfamily MFS_14e-1479.7
NC_015574:806762:8079678079678092231257Methanobacterium sp. SWAN-1 chromosome, complete genomemajor facilitator superfamily protein3e-1479.7
NC_020157:36234:4601746017474081392Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequencemajor facilitator superfamily MFS_17e-1479
NC_003272:3237643:3238656323865632399691314Nostoc sp. PCC 7120, complete genomehypothetical protein2e-1377.4
NC_006582:883922:9132959132959145241230Bacillus clausii KSM-K16, complete genomemultidrug-efflux transporter2e-1377.4
NC_008595:1349579:1371633137163313728501218Mycobacterium avium 104, complete genometransporter, major facilitator family protein3e-1376.6
NC_012793:1718000:1740938174093817421551218Geobacillus sp. WCH70, complete genomemajor facilitator superfamily MFS_14e-1376.3
NC_016582:7737930:7756882775688277581861305Streptomyces bingchenggensis BCW-1 chromosome, complete genomemajor facilitator superfamily transporter6e-1375.5
NC_005071:172364:1965301965301977651236Prochlorococcus marinus str. MIT 9313, complete genomemultidrug efflux MFS family transporter7e-1375.5
NC_011830:1190502:1206839120683912080861248Desulfitobacterium hafniense DCB-2, complete genomemajor facilitator superfamily MFS_11e-1275.1
NC_014830:13179:2419824198254121215Intrasporangium calvum DSM 43043 chromosome, complete genomemajor facilitator superfamily MFS_12e-1273.9
NC_013956:1762171:1770424177042417717221299Pantoea ananatis LMG 20103 chromosome, complete genomeYbdA4e-1273.2
NC_015856:3059737:3079645307964530810331389Collimonas fungivorans Ter331 chromosome, complete genomemajor facilitator superfamily protein4e-1273.2
NC_011969:4613430:4628815462881546300621248Bacillus cereus Q1 chromosome, complete genomehypothetical protein5e-1272.4
NC_011658:4672000:4688430468843046896771248Bacillus cereus AH187 chromosome, complete genomeputative transporter5e-1272.4
NC_009523:5475812:5489893548989354911881296Roseiflexus sp. RS-1 chromosome, complete genomemajor facilitator transporter6e-1272.4
NC_013131:7530000:7535152753515275363991248Catenulispora acidiphila DSM 44928, complete genomemajor facilitator superfamily MFS_19e-1271.6
NC_011567:2405000:2418909241890924201621254Anoxybacillus flavithermus WK1, complete genomePermease of the major facilitator superfamily9e-1271.6
NC_008820:211616:2313472313472325821236Prochlorococcus marinus str. MIT 9303, complete genomemultidrug efflux MFS family transporter9e-1271.6
NC_015953:2681331:2684013268401326855361524Streptomyces sp. SirexAA-E chromosome, complete genomemajor facilitator superfamily protein1e-1171.2
NC_014915:2900209:2914262291426229155331272Geobacillus sp. Y412MC52 chromosome, complete genomemajor facilitator superfamily MFS_11e-1171.2
NC_013411:681907:6884026884026896731272Geobacillus sp. Y412MC61, complete genomemajor facilitator superfamily MFS_11e-1171.2
NC_017208:4887334:4904934490493449061811248Bacillus thuringiensis serovar chinensis CT-43 chromosome, completemacrolide-efflux protein2e-1170.9
NC_013205:19295:4064340643418661224Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,major facilitator superfamily MFS_12e-1170.5
NC_017094:828836:8916318916318929111281Leptospirillum ferrooxidans C2-3, complete genomemajor facilitator superfamily MFS_13e-1169.7
NC_004578:934867:9398849398849410681185Pseudomonas syringae pv. tomato str. DC3000, complete genomemacrolide efflux protein, putative7e-1168.6
NC_012880:1765920:1777813177781317791111299Dickeya dadantii Ech703, complete genomemajor facilitator superfamily MFS_17e-1168.6
NC_013093:2547608:2561488256148825626601173Actinosynnema mirum DSM 43827, complete genomemajor facilitator superfamily MFS_11e-1068.2
NC_015589:2049328:2064463206446320657221260Desulfotomaculum ruminis DSM 2154 chromosome, complete genomemajor facilitator superfamily protein2e-1067.8
NC_011653:748844:7666147666147679061293Thermosipho africanus TCF52B, complete genomemacrolide-efflux determinant8e-1065.5
NC_009718:643200:6659996659996672821284Fervidobacterium nodosum Rt17-B1, complete genomemajor facilitator transporter1e-0964.7
NC_013093:2633000:2644572264457226458971326Actinosynnema mirum DSM 43827, complete genomemajor facilitator superfamily MFS_11e-0964.7
NC_021171:2562000:2580717258071725820211305Bacillus sp. 1NLA3E, complete genomemajor facilitator superfamily protein2e-0964.3
NC_018750:6192970:6191567619156761929731407Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein4e-0963.2
NC_010376:49185:4985649856511571302Finegoldia magna ATCC 29328, complete genomemacrolide-efflux pump9e-0962
NC_010617:92000:1124411124411137211281Kocuria rhizophila DC2201, complete genomeputative MFS transporter1e-0861.6
NC_008095:6559009:6565661656566165669051245Myxococcus xanthus DK 1622, complete genometransporter, major facilitator family1e-0861.2
NC_009633:4308016:4327713432771343289901278Alkaliphilus metalliredigens QYMF chromosome, complete genomemajor facilitator superfamily transporter2e-0860.8
NC_013595:5176000:5188107518810751894441338Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-0860.8
NC_018681:5695343:5723529572352957247521224Nocardia brasiliensis ATCC 700358 chromosome, complete genomemajor facilitator transporter2e-0860.8
NC_014391:1910273:1930307193030719316441338Micromonospora aurantiaca ATCC 27029 chromosome, complete genomemajor facilitator superfamily protein5e-0859.3
NC_007802:1991211:2015625201562520168811257Jannaschia sp. CCS1, complete genomemajor facilitator superfamily MFS_17e-0858.9
NC_009380:725870:7380917380917393981308Salinispora tropica CNB-440 chromosome, complete genomemajor facilitator transporter9e-0858.5
NC_018720:1336839:1345017134501713462521236Bifidobacterium asteroides PRL2011 chromosome, complete genomeMFS transporter, probably The macrolide (erythromycin, oleando-mycin, azithromycin) efflux, MefA1e-0758.2
NC_014376:1879000:1893130189313018943411212Clostridium saccharolyticum WM1 chromosome, complete genomemajor facilitator superfamily MFS_11e-0758.2
NC_016048:4163225:4194075419407541952621188Oscillibacter valericigenes Sjm18-20, complete genomemajor facilitator superfamily transporter2e-0757.8
NC_008319:571821:5718215718215732391419Synechococcus sp. CC9311, complete genometransporter, major facilitator family protein2e-0757
NC_015224:2473582:2475252247525224765051254Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative membrane transport protein5e-0756.2
NC_010125:2884762:2926672292667229278891218Gluconacetobacter diazotrophicus PAl 5, complete genomeputative major facilitator superfamily (MFS) transporter5e-0755.8
NC_009664:4423829:4633438463343846347181281Kineococcus radiotolerans SRS30216, complete genomemajor facilitator superfamily MFS_16e-0755.8
NC_017337:2588331:2588331258833125895241194Staphylococcus aureus subsp. aureus ED133 chromosome, completepermease8e-0755.5
NC_013450:2572530:2575778257577825768541077Staphylococcus aureus subsp. aureus ED98, complete genomehypothetical protein7e-0755.5
NC_016912:2433500:2439643243964324408361194Staphylococcus aureus subsp. aureus VC40 chromosome, completetransporter protein7e-0755.5
NC_010079:2618345:2621477262147726226701194Staphylococcus aureus subsp. aureus USA300_TCH1516, completeMFS family major facilitator transporter, cation symporter7e-0755.5
NC_007793:2618195:2621327262132726225201194Staphylococcus aureus subsp. aureus USA300, complete genometransporter protein7e-0755.5
NC_002951:2554511:2557643255764325588361194Staphylococcus aureus subsp. aureus COL, complete genomepermease, putative7e-0755.5
NC_007795:2561928:2568432256843225696251194Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein7e-0755.5
NC_009641:2619759:2626263262626326274561194Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein7e-0755.5
NC_017341:2648631:2651592265159226527851194Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,major facilitator superfamily cation symporter7e-0755.5
NC_014614:2643203:2663816266381626650301215Clostridium sticklandii, complete genomeTetracycline resistance determinant tetV7e-0755.5
NC_010067:3247169:3254198325419832554451248Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-0755.1
NC_013595:8162181:8195270819527081964901221Streptosporangium roseum DSM 43021, complete genomeantibiotic efflux protein8e-0755.1
NC_009782:2627884:2631075263107526321511077Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein1e-0654.7
NC_002745:2553138:2558243255824325593191077Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein1e-0654.7
NC_002758:2628000:2629437262943726305131077Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein1e-0654.7
NC_009487:2656420:2659695265969526607711077Staphylococcus aureus subsp. aureus JH9 chromosome, completemajor facilitator transporter1e-0654.7
NC_009632:2656296:2659571265957126606471077Staphylococcus aureus subsp. aureus JH1 chromosome, completemajor facilitator transporter1e-0654.7
NC_017343:2474743:2481378248137824824541077Staphylococcus aureus subsp. aureus ECT-R 2, complete genomemajor facilitator superfamily protein1e-0654.7
NC_016941:2498299:2504771250477125059641194Staphylococcus aureus subsp. aureus MSHR1132, complete genomeMajor Facilitator Superfamily protein1e-0654.7
NC_017351:2594171:2597128259712825983211194Staphylococcus aureus subsp. aureus 11819-97 chromosome, completemajor facilitator superfamily protein2e-0654.3
NC_015951:46000:4684746847481211275Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completemajor facilitator superfamily protein2e-0653.9
NC_012997:4491871:4505769450576945070221254Teredinibacter turnerae T7901, complete genomeputative enterobactin exporter EntS2e-0653.9
NC_013131:5226919:5232481523248152337281248Catenulispora acidiphila DSM 44928, complete genomemajor facilitator superfamily MFS_13e-0653.5
NC_012720:114489:1144891144891157271239Burkholderia glumae BGR1 plasmid bglu_3p, complete sequenceMajor facilitator superfamily MFS_13e-0653.5
NC_011134:1951682:1960147196014719612591113Streptococcus equi subsp. zooepidemicus str. MGCS10565, completemajor facilitator family protein2e-0653.5
NC_016109:1775259:1796847179684717980731227Kitasatospora setae KM-6054, complete genomeputative major facilitator superfamily transporter2e-0653.5
NC_003923:2561953:2568466256846625696591194Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein5e-0652.8
NC_002953:2541264:2547783254778325489761194Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein5e-0652.8
NC_019673:1384795:1406707140670714079091203Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein6e-0652.4
NC_009617:1165539:1167177116717711684121236Clostridium beijerinckii NCIMB 8052 chromosome, complete genomemajor facilitator superfamily transporter7e-0652.4
NC_007005:2191500:2196210219621021974331224Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein7e-0652