Pre_GI: BLASTP Hits

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Query: NC_013198:394000:401179 Lactobacillus rhamnosus GG, complete genome

Start: 401179, End: 401628, Length: 450

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013850:2685835:269425926942592694729471Klebsiella variicola At-22 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN1e-22105
NC_013198:394000:412099412099412572474Lactobacillus rhamnosus GG, complete genomePTS system, fructose-specific IIA component1e-22105
NC_016845:2691129:270226827022682702738471Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,PTS family enzyme IIA/ enzyme IIBC2e-22104
NC_012731:2650603:266172126617212662191471Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomefructose-mannitol-specific PTS family enzyme IIA component2e-22104
NC_009648:1914621:192574119257411926211471Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomePTS family enzyme IIA/ enzyme IIBC2e-22104
NC_010498:4072681:407499240749924075462471Escherichia coli SMS-3-5, complete genomePTS system, fructose family, IIA component3e-22103
NC_020181:969599:978102978102978566465Enterobacter aerogenes EA1509E, complete genomePTS system, fructose-specific IIA component1e-21102
NC_015663:4447984:445852544585254458989465Enterobacter aerogenes KCTC 2190 chromosome, complete genomePTS IIA-like nitrogen-regulatory protein PtsN7e-2199.4
NC_014377:532816:5535915535915554221832Thermosediminibacter oceani DSM 16646 chromosome, complete genome5e-2096.7
NC_007644:3229:145621456215026465Moorella thermoacetica ATCC 39073, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN8e-2095.9
NC_010483:642577:649497649497649949453Thermotoga sp. RQ2, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN1e-1789
NC_013642:942767:970308970308970760453Thermotoga naphthophila RKU-10, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN1e-1788.6
NC_009437:2579161:258256325825632583012450Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN9e-1785.9
NC_015391:2449927:245398724539872454439453Carnobacterium sp. 17-4 chromosome, complete genomePTS system mannose-specific EIIBCA component1e-1685.1
NC_015565:2827444:284287628428762843328453Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeputative PTS IIA-like nitrogen-regulatory protein PtsN2e-1684.7
NC_013921:2293411:229819122981912298646456Thermoanaerobacter italicus Ab9 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN2e-1684.3
NC_017195:1230485:1249720124972012516721953Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completephosphotransferase system3e-1684
NC_020244:1264500:1275845127584512777971953Bacillus subtilis XF-1, complete genomephosphotransferase system (PTS) mannose-specific enzyme IIBCA component3e-1580.9
NC_014976:3469395:3485323348532334872751953Bacillus subtilis BSn5 chromosome, complete genomePTS mannose-specific transporter subunit IIBCA5e-1580.1
NC_011660:2175537:219569621956962196160465Listeria monocytogenes HCC23 chromosome, complete genomeiiabc fructose/xylitol-pts8e-1579.3
NC_019842:2575000:2590378259037825923361959Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,PTS system mannose-specific transporter subunits IIBCA8e-1579.3
NC_020272:1384525:1386630138663013885881959Bacillus amyloliquefaciens IT-45, complete genomePTS system mannose-specific transporter subunits IIBCA2e-1478.2
NC_009725:2517428:2536355253635525383131959Bacillus amyloliquefaciens FZB42, complete genomeManP2e-1478.2
NC_014328:2872721:288955228895522889989438Clostridium ljungdahlii ATCC 49587 chromosome, complete genomePTS system fructose/mannose-specific transporter subunit IIA3e-1477.4
NC_017188:2512357:2527206252720625291611956Bacillus amyloliquefaciens TA208 chromosome, complete genomeManP3e-1477.4
NC_017191:2514401:2529250252925025312051956Bacillus amyloliquefaciens XH7 chromosome, complete genomePTS system mannose-specific transporter subunit IIBCA3e-1477.4
NC_013199:392450:4054264054264073691944Lactobacillus rhamnosus Lc 705, complete genomePTS system, fructose-specific IIABC component (fruA-2)2e-1374.3
NC_015687:250768:264280264280264723444Clostridium acetobutylicum DSM 1731 chromosome, complete genomePTS system, IIA component2e-1374.3
NC_003030:249648:264282264282264725444Clostridium acetobutylicum ATCC 824, complete genomePTS system, IIA component2e-1374.3
NC_016779:4969626:4981803498180349837551953Bacillus cereus F837/76 chromosome, complete genomePTS system mannose-specific transporter subunit IIB2e-1374.3
NC_008600:5005345:5017535501753550195021968Bacillus thuringiensis str. Al Hakam, complete genomephosphotransferase system (PTS) mannose-specific enzyme IIBCA2e-1374.3
NC_012472:5015621:5027811502781150297631953Bacillus cereus 03BB102, complete genomephosphotransferase system3e-1373.9
NC_011969:4945441:4958931495893149608831953Bacillus cereus Q1 chromosome, complete genomepts mannose-specific enzyme iibca component3e-1373.9
NC_015634:2492771:2522737252273725246351899Bacillus coagulans 2-6 chromosome, complete genomePTS system, fructose subfamily, IIC subunit3e-1270.5
NC_014654:1:259152591526364450Halanaerobium sp. 'sapolanicus' chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN5e-1270.1
NC_017270:1755552:179720217972021797642441Vibrio cholerae LMA3984-4 chromosome chromosome I, completePhosphotransferase system mannitol/fructose- specific IIA domain protein6e-1269.7
NC_015500:484984:5087925087925109722181Treponema brennaborense DSM 12168 chromosome, complete genomesodium/hydrogen exchanger7e-1269.3
NC_014335:3461115:3471548347154834732601713Bacillus cereus biovar anthracis str. CI chromosome, completePTS fructose-specific enzyme IIBC component1e-1168.9
NC_012581:709234:7175947175947194741881Bacillus anthracis str. CDC 684 chromosome, complete genomePTS system fructose-specific transporter subunit IIABC1e-1168.6
NC_012781:4065:1960719607215351929Eubacterium rectale ATCC 33656, complete genomePTS system, fructose-specific, IIABC component2e-1168.2
NC_011773:3547507:3558350355835035602061857Bacillus cereus AH820 chromosome, complete genomePTS system fructose-specific transporter subunit IIABC2e-1168.2
NC_015152:2887414:290229129022912902737447Spirochaeta sp. Buddy chromosome, complete genomePTS IIA-like nitrogen-regulatory protein PtsN4e-1167
NC_003909:3483244:3494145349414534960011857Bacillus cereus ATCC 10987, complete genomePTS system, fructose-specific IIABC component5e-1166.6
NC_009328:3322802:3325601332560133275771977Geobacillus thermodenitrificans NG80-2 chromosome, complete genomephosphotransferase system, fructose-specific IIC component1e-1065.5
NC_010842:2919108:293816229381622938623462Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeProtein-N(pi)-phosphohistidine-sugar phosphotransferase, subunit A2e-1065.1
NC_010602:2911823:292977629297762930237462Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'PTS system, IIA component2e-1065.1
NC_015152:1230995:123217012321701232622453Spirochaeta sp. Buddy chromosome, complete genomePTS IIA-like nitrogen-regulatory protein PtsN2e-1064.7
NC_005362:1796696:1806355180635518083401986Lactobacillus johnsonii NCC 533, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probable fructose specific3e-1064.3
NC_014484:447889:449844449844450299456Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein3e-1063.9
NC_013171:416279:4333464333464352081863Anaerococcus prevotii DSM 20548, complete genomePTS system, fructose subfamily, IIC subunit3e-1063.9
NC_013174:73948:734997349973951453Jonesia denitrificans DSM 20603, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN4e-1063.5
NC_014484:447889:449153449153449854702Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein9e-1062.4
NC_015732:2057895:2076340207634020784692130Spirochaeta caldaria DSM 7334 chromosome, complete genomesodium/hydrogen exchanger9e-1062.4
NC_015214:1853106:1874088187408818760912004Lactobacillus acidophilus 30SC chromosome, complete genomePTS system, fructose-specific enzyme II1e-0962
NC_015389:1070500:108521810852181085676459Coriobacterium glomerans PW2 chromosome, complete genomePTS system D-fructose-specific IIA component (F1P-forming), Frc family1e-0962
NC_015761:2373967:2399144239914424016392496Salmonella bongori NCTC 12419, complete genomephosphoenolpyruvate-protein phosphotransferase3e-0960.8
NC_014334:369974:3873613873613893491989Lactobacillus casei str. Zhang chromosome, complete genomePTS system fructose-specific transporter subunit IIABC4e-0960.1
NC_013515:347671:372227372227372685459Streptobacillus moniliformis DSM 12112, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN8e-0959.3
NC_016894:377446:3791203791203810301911Acetobacterium woodii DSM 1030 chromosome, complete genomefructose-specific PTS system II components ABC9e-0959.3
NC_015424:2510764:2528848252884825307941947Aeromonas veronii B565 chromosome, complete genomePermease IIC component2e-0858.2
NC_009617:648000:651641651641652087447Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS transporter subunit IIA-like nitrogen-regulatory protein PtsN2e-0858.2
NC_009725:2517428:2538466253846625404181953Bacillus amyloliquefaciens FZB42, complete genomeManR4e-0857
NC_017300:1426975:1442403144240314444362034Corynebacterium pseudotuberculosis 1002 chromosome, completePTS system fructose-specific transporter subunit IIABC6e-0856.2
NC_016932:1414226:1429649142964914316822034Corynebacterium pseudotuberculosis 316 chromosome, complete genomePTS system, manose-specific EIIABC component6e-0856.2
NC_006055:183823:2101622101622123092148Mesoplasma florum L1, complete genomefructose-specific PTS system IIABC component6e-0856.2
NC_020272:1384525:1384525138452513864771953Bacillus amyloliquefaciens IT-45, complete genomeputative licABCH operon regulator7e-0856.2
NC_019842:2575000:2592489259248925944411953Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,licABCH operon regulator8e-0856.2
NC_009617:234782:252039252039252506468Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS transporter subunit IIA-like nitrogen-regulatory protein PtsN1e-0755.8
NC_015731:990000:991959991959992426468Nitrosomonas sp. Is79A3 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN9e-0855.8
NC_017098:875378:8774938774938795742082Spirochaeta africana DSM 8902 chromosome, complete genomeKef-type K+ transport system membrane protein1e-0755.5
NC_016629:3496630:349663034966303497079450Desulfovibrio africanus str. Walvis Bay chromosome, completeputative PTS IIA-like nitrogen-regulatory protein PtsN2e-0755.1
NC_015500:1923514:196319519631951963845651Treponema brennaborense DSM 12168 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN2e-0755.1
NC_020995:789665:8061888061888081221935Enterococcus casseliflavus EC20, complete genomehypothetical protein3e-0754.3
NC_019908:1512622:153162015316201532084465Brachyspira pilosicoli P43/6/78 chromosome, complete genomePTS system fructose subfamily transporter subunit IIC2e-0754.3
NC_014377:1400544:141148014114801411953474Thermosediminibacter oceani DSM 16646 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN5e-0753.5
NC_011969:4945441:4961027496102749629731947Bacillus cereus Q1 chromosome, complete genomemanr7e-0752.8
NC_020409:560278:574539574539574988450Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative PTS IIA-like nitrogen-regulatory protein PtsN8e-0752.8
NC_017191:2514401:2531358253135825333101953Bacillus amyloliquefaciens XH7 chromosome, complete genomemannose operon transcriptional antiterminator9e-0752.4
NC_017188:2512357:2529314252931425312661953Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional antiterminator9e-0752.4
NC_012472:5015621:5029907502990750318531947Bacillus cereus 03BB102, complete genometranscriptional regulator1e-0652
NC_016779:4969626:4983899498389949858451947Bacillus cereus F837/76 chromosome, complete genomeBglG family transcriptional antiterminator2e-0651.6
NC_017195:1230485:1247625124762512495711947Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeHTH domain family2e-0651.6
NC_014976:3469395:3483227348322734851731947Bacillus subtilis BSn5 chromosome, complete genometranscriptional antiterminator2e-0651.6
NC_020995:789665:808370808370808831462Enterococcus casseliflavus EC20, complete genomePTS system, fructose subfamily, IIA component2e-0651.6
NC_014650:2417509:242881224288122429279468Geobacillus sp. Y4.1MC1 chromosome, complete genomePTS IIA-like nitrogen-regulatory protein PtsN2e-0651.6
NC_008149:318860:3409663409663435242559Yersinia pestis Nepal516, complete genomephosphoenolpyruvate-protein phosphotransferase2e-0651.2
NC_003143:398748:4217584217584243162559Yersinia pestis CO92, complete genomeputative phosphoenolpyruvate-protein phosphotransferase2e-0651.2
NC_014029:452248:4753874753874778162430Yersinia pestis Z176003 chromosome, complete genomeHPr family phosphocarrier protein2e-0651.2
NC_017154:394401:4175394175394199682430Yersinia pestis D106004 chromosome, complete genomeHPr family phosphocarrier protein2e-0651.2
NC_017160:396600:4197394197394221682430Yersinia pestis D182038 chromosome, complete genomeHPr family phosphocarrier protein2e-0651.2
NC_013956:2592378:260031726003172600778462Pantoea ananatis LMG 20103 chromosome, complete genomeFryA3e-0650.8
NC_014377:532816:5554125554125573791968Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional antiterminator, BglG3e-0650.8
NC_008600:5005345:5019631501963150215861956Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator4e-0650.4
NC_017341:2303005:230672223067222307156435Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2, MtlA_15e-0650.1
NC_002951:2208813:221253022125302212964435Staphylococcus aureus subsp. aureus COL, complete genomePTS system, mannitol-specific IIA component5e-0650.1
NC_013517:3385166:340146234014623401920459Sebaldella termitidis ATCC 33386, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN1e-0548.9