Pre_GI: BLASTP Hits

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Query: NC_013037:1015210:1023300 Dyadobacter fermentans DSM 18053, complete genome

Start: 1023300, End: 1023725, Length: 426

Host Lineage: Dyadobacter fermentans; Dyadobacter; Cytophagaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: Isolation: Surface sterilized stems from Zea mays; Country: USA; Temp: Mesophile; Temp: 28C; Habitat: Host, Soil. Dyadobacter fermentans is a non-nitrogen-fixing bacterium isolated in an attempt to characterize the bacterial community that exists endophytically with Zea mays grown on a nitrogen-limited medium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014933:1759729:178049017804901781248759Bacteroides helcogenes P 36-108 chromosome, complete genometwo component transcriptional regulator, LytTR family2e-29127
NC_013037:2906730:290979229097922910562771Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LytTR family8e-2095.9
NC_013222:3060482:306243030624303063287858Robiginitalea biformata HTCC2501, complete genomeputative response regulator5e-1993.2
NC_020054:2033982:205579120557912056564774Fibrella aestuarina BUZ 2 drat genomeSensory transduction protein lytT1e-1891.7
NC_016609:2951301:298003529800352980781747Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator2e-1684.3
NC_016609:4331359:434517843451784345930753Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator3e-1580.9
NC_013037:6209424:621057962105796211313735Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LytTR family8e-1579
NC_017316:2581781:259771425977142598442729Enterococcus faecalis OG1RF chromosome, complete genomeresponse regulator3e-1373.9
NC_004668:3053119:306801830680183068746729Enterococcus faecalis V583, complete genomeresponse regulator3e-1373.9
NC_014032:338547:361332361332362084753Salinibacter ruber M8 chromosome, complete genomesensory transduction protein lytT3e-1270.9
NC_020126:8984500:898947889894788990179702Myxococcus stipitatus DSM 14675, complete genometwo component transcriptional regulator, LytTR family protein3e-1167.4
NC_016609:5890292:591878759187875919545759Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator9e-1165.5
NC_015510:6653159:666073866607386661478741Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator1e-1065.5
NC_016751:1700164:172001917200191720765747Marinitoga piezophila KA3 chromosome, complete genomeresponse regulator of the LytR/AlgR family1e-1065.1
NC_008009:1264791:126479112647911265579789Acidobacteria bacterium Ellin345, complete genometranscriptional regulator, LytR/AlgR family1e-1065.1
NC_015703:2693463:270975827097582710495738Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator2e-1064.7
NC_013061:1856969:187473818747381875517780Pedobacter heparinus DSM 2366, complete genomeLytTr DNA-binding region2e-1064.3
NC_015856:3536441:356048135604813561233753Collimonas fungivorans Ter331 chromosome, complete genomeputative two-component response regulator transcription protein3e-1063.9
NC_013194:1040197:105397910539791054695717Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetwo component transcriptional regulator, LytTR family3e-1063.9
NC_016940:470163:502234502234502953720Saprospira grandis str. Lewin chromosome, complete genometwo component transcriptional regulator, LytTR family protein5e-1063.2
NC_003228:3752035:375130137513013752038738Bacteroides fragilis NCTC 9343, complete genomeputative two-component system, response regulator5e-1063.2
NC_006347:3843228:384459438445943845331738Bacteroides fragilis YCH46, complete genometwo-component system response regulator5e-1063.2
NC_016776:3798108:379737437973743798111738Bacteroides fragilis 638R, complete genomeputative two-component system, response regulator5e-1063.2
NC_019968:1304450:131481713148171315533717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family9e-1062.4
NC_019968:1084288:112808911280891128805717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family9e-1062.4
NC_020126:5152359:516493051649305165715786Myxococcus stipitatus DSM 14675, complete genomeDNA-binding response regulator1e-0962
NC_013037:5442131:545847354584735459195723Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LytTR family5e-0960.1
NC_018721:2872780:287278028727802873505726Psychroflexus torquis ATCC 700755 chromosome, complete genometwo-component system response regulator, LytR/AlgR family8e-0959.3
NC_020126:7285452:730537573053757306187813Myxococcus stipitatus DSM 14675, complete genomeLyTR family two component transcriptional regulator9e-0958.9
NC_004663:1499145:151426015142601514958699Bacteroides thetaiotaomicron VPI-5482, complete genometwo-component system response regulator9e-0958.9
NC_009828:600349:601856601856602527672Thermotoga lettingae TMO, complete genometwo component transcriptional regulator, LytTR family1e-0858.5
NC_009792:642881:644563644563645282720Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-0858.2
NC_006347:2190000:219573921957392196437699Bacteroides fragilis YCH46, complete genometwo-component system response regulator2e-0857.8
NC_003228:2245181:225199322519932252691699Bacteroides fragilis NCTC 9343, complete genomeputative two-component system response regulator2e-0857.8
NC_016776:2237404:224442922444292245127699Bacteroides fragilis 638R, complete genomeputative two-component system response regulator2e-0857.8
NC_014393:1421122:1427612142761214287121101Clostridium cellulovorans 743B chromosome, complete genomeresponse regulator receiver and SARP domain-containing protein3e-0857.4
NC_020272:3187482:3201383320138332024591077Bacillus amyloliquefaciens IT-45, complete genomeresponse regulator MprA3e-0857.4
NC_009615:2311352:231296223129622313666705Parabacteroides distasonis ATCC 8503 chromosome, complete genometwo-component system response regulator3e-0857.4
NC_021182:1473535:147521614752161475986771Clostridium pasteurianum BC1, complete genomeresponse regulator of the LytR/AlgR family3e-0857.4
NC_018868:2867500:286792228679222868728807Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeresponse regulator4e-0857
NC_014633:583858:604072604072604797726Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceLytTR family two component transcriptional regulator5e-0856.6
NC_002695:2893951:289323528932352893954720Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-0856.6
NC_013008:2889743:288902728890272889746720Escherichia coli O157:H7 str. TW14359 chromosome, complete genometwo-component response-regulatory protein YehT5e-0856.6
NC_011750:919953:938353938353939072720Escherichia coli IAI39 chromosome, complete genomeputative two-component response-regulatory protein YehT5e-0856.6
NC_009446:473960:4739604739604755461587Dichelobacter nodosus VCS1703A, complete genometwo-component response regulator PilR5e-0856.6
NC_008536:1778500:179196917919691792745777Solibacter usitatus Ellin6076, complete genomeresponse regulator receiver protein5e-0856.6
NC_009616:99647:116610116610117290681Thermosipho melanesiensis BI429 chromosome, complete genomeLytTR family two component transcriptional regulator5e-0856.6
NC_007575:973559:975967975967976665699Sulfurimonas denitrificans DSM 1251, complete genomeLytR/AlgR family transcriptional regulator4e-0856.6
NC_015510:1234500:125508212550821255795714Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator4e-0856.6
NC_014624:1549312:155611215561121556783672Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein4e-0856.6
NC_020126:7686076:768779776877977688558762Myxococcus stipitatus DSM 14675, complete genomeDNA-binding response regulator6e-0856.2
NC_015177:2972701:297270129727012973447747Pedobacter saltans DSM 12145 chromosome, complete genometwo component transcriptional regulator, LytTR family1e-0755.5
NC_014933:3715467:371826637182663718967702Bacteroides helcogenes P 36-108 chromosome, complete genometwo component transcriptional regulator, LytTR family1e-0755.1
NC_010658:2529033:255507825550782555812735Shigella boydii CDC 3083-94, complete genomeresponse regulator1e-0755.1
NC_008258:2473000:249696424969642497698735Shigella flexneri 5 str. 8401, complete genomeputative 2-component transcriptional regulator1e-0755.1
NC_004337:2478461:250322425032242503958735Shigella flexneri 2a str. 301, complete genomeputative 2-component transcriptional regulator1e-0755.1
CP002516:1419413:142028314202831421017735Escherichia coli KO11, complete genometwo component transcriptional regulator, LytTR family1e-0755.1
NC_013941:2928000:296958729695872970321735Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-0755.1
NC_016822:2678691:270562327056232706357735Shigella sonnei 53G, complete genomeLytTR family two component transcriptional regulator1e-0755.1
NC_016902:1419413:142028314202831421017735Escherichia coli KO11FL chromosome, complete genomeLytTR family two component transcriptional regulator1e-0755.1
NC_020260:1111130:112837811283781129103726Cronobacter sakazakii Sp291, complete genometwo-component response-regulatory protein YehT2e-0754.7
NC_009778:1070000:108629010862901087015726Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0754.7
NC_009617:648000:666775666775667533759Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeLytTR family two component transcriptional regulator2e-0754.7
NC_014532:722151:721486721486722154669Halomonas elongata DSM 2581, complete genomeTwo-component response regulator protein2e-0754.7
NC_012917:3565268:357072135707213571437717Pectobacterium carotovorum subsp. carotovorum PC1, complete genometwo component transcriptional regulator, LytTR family3e-0754.3
NC_015726:3452232:345363334536333454394762Cupriavidus necator N-1 chromosome 1, complete sequenceLytR family transcriptional regulator3e-0753.9
NC_012880:1091486:109317110931711093896726Dickeya dadantii Ech703, complete genometwo component transcriptional regulator, LytTR family4e-0753.5
NC_015589:2281054:228878522887852289513729Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeLytTr DNA-binding protein6e-0753.1
NC_015172:1195782:123432612343261235012687Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometwo component transcriptional regulator, winged helix family7e-0752.8
NC_015510:1234500:125002412500241250725702Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator7e-0752.8
NC_017025:1735835:174216717421671742898732Flavobacterium indicum GPTSA100-9, complete genomeTwo-component system response regulatory protein, LytTR family7e-0752.8
NC_010001:3895264:3915499391549939171451647Clostridium phytofermentans ISDg, complete genometwo component transcriptional regulator, AraC family8e-0752.4
NC_014633:837588:857228857228857983756Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceLytTR family two component transcriptional regulator1e-0652.4
NC_009454:1389974:139536613953661396043678Pelotomaculum thermopropionicum SI, complete genomeresponse regulator1e-0652
NC_008786:2573558:258760725876072588437831Verminephrobacter eiseniae EF01-2, complete genomeresponse regulator receiver protein1e-0652
NC_003901:3544712:356219135621913562697507Methanosarcina mazei Go1, complete genometranscriptional regulator1e-0651.6
NC_020054:3501467:351843235184323519181750Fibrella aestuarina BUZ 2 drat genometwo component transcriptional regulator, LytTR family1e-0651.6
NC_015703:4483500:449270544927054493430726Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator2e-0650.8
NC_016112:57641:6315563155653142160Methylomicrobium alcaliphilum chromosome, complete genomePAS fold family3e-0650.4
NC_015977:2920500:293348929334892934178690Roseburia hominis A2-183 chromosome, complete genomeregulatory protein VanR3e-0650.4
NC_007677:324000:344731344731345489759Salinibacter ruber DSM 13855, complete genomealginate biosynthesis regulatory protein4e-0650.1
NC_013406:347995:347995347995348765771Paenibacillus sp. Y412MC10 chromosome, complete genomeresponse regulator receiver and SARP domain-containing protein6e-0649.7
NC_014364:2863686:288317228831722883873702Spirochaeta smaragdinae DSM 11293 chromosome, complete genometwo component transcriptional regulator, winged helix family7e-0649.3