Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:3895264 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
38952643895749486TM2 domain containing proteinQuickGO ontology
38958403896226387hypothetical protein
38962933897282990aminoglycoside phosphotransferaseQuickGO ontologyBLASTP
38976243898055432hypothetical proteinBLASTP
389841039006412232CellulaseQuickGO ontologyBLASTP
390087839049634086hypothetical protein
39052113905993783GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
39060623907021960NAD-dependent glycerol-3-phosphate dehydrogenase domain proteinQuickGO ontologyBLASTP
390771939099082190methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
391013039112751146glycoside hydrolase family 8QuickGO ontologyBLASTP
39114683912373906binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
39124653913424960binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
391360139153101710putative multiple sugar transport system substrate-binding proteinQuickGO ontologyBLASTP
391549939171451647two component transcriptional regulator AraC familyQuickGO ontologyBLASTP