Pre_GI: BLASTP Hits

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Query: NC_012917:569856:570995 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 570995, End: 571564, Length: 570

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007613:4156841:416472241647224165279558Shigella boydii Sb227, complete genomeATP-binding component of phosphonate transport3e-43174
NC_002655:5194804:520036552003655200922558Escherichia coli O157:H7 EDL933, complete genomeATP-binding component of phosphonate transport4e-43174
NC_013364:5040268:504813450481345048691558Escherichia coli O111:H- str. 11128, complete genomeribose 1,5-bisphosphokinase PhnN4e-43174
NC_016822:4686971:469125246912524691809558Shigella sonnei 53G, complete genomeribose 1,5-bisphosphokinase6e-43173
NC_012967:4289929:429434742943474294904558Escherichia coli B str. REL606 chromosome, complete genomeribose 1,5-bisphosphokinase6e-43173
NC_012947:4106031:411920441192044119761558Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeribose 1,5-bisphosphokinase6e-43173
NC_012759:4247865:425228342522834252840558Escherichia coli BW2952 chromosome, complete genomeribose 1,5-bisphosphokinase6e-43173
NC_010473:4409492:441391044139104414467558Escherichia coli str. K-12 substr. DH10B, complete genomeribose 1,5-bisphosphokinase6e-43173
AC_000091:4313167:432020343202034320760558Escherichia coli W3110 DNA, complete genomeribose 1,5-bisphosphokinase6e-43173
NC_007384:4530000:453432545343254534882558Shigella sonnei Ss046, complete genomeATP-binding component of phosphonate transport6e-43173
NC_000913:4307471:431354843135484314105558Escherichia coli K12, complete genomeribose 1,5-bisphosphokinase6e-43173
CP002516:4431235:444451644445164445073558Escherichia coli KO11, complete genomephosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN6e-43173
NC_010468:4305105:431787943178794318436558Escherichia coli ATCC 8739, complete genomephosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN6e-43173
NC_011742:4569683:457660045766004577157558Escherichia coli S88 chromosome, complete genomeribose 1,5-bisphosphokinase7e-43173
NC_008563:4656000:466207246620724662629558Escherichia coli APEC O1, complete genomePhnN, ATP-binding component of phosphonate transport7e-43173
NC_016902:4431235:444451644445164445073558Escherichia coli KO11FL chromosome, complete genomephosphonate metabolism protein/1,5-bisphosphokinase PhnN6e-43173
CP002185:4566150:457401645740164574573558Escherichia coli W, complete genomeribose 1,5-bisphosphokinase5e-43173
NC_011748:4695932:470021347002134700770558Escherichia coli 55989, complete genomeribose 1,5-bisphosphokinase5e-43173
NC_013941:5013695:501924650192465019803558Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN5e-43173
NC_013353:5022196:502661450266145027171558Escherichia coli O103:H2 str. 12009, complete genomeribose 1,5-bisphosphokinase PhnN5e-43173
NC_013008:5196080:520164152016415202198558Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeribose 1,5-bisphosphokinase5e-43173
NC_011353:5240020:524558052455805246137558Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeribose 1,5-bisphosphokinase5e-43173
AP010958:5022196:502661450266145027171558Escherichia coli O103:H2 str. 12009 DNA, complete genomeribose 1,5-bisphosphokinase PhnN5e-43173
NC_002695:5164819:517038051703805170937558Escherichia coli O157:H7 str. Sakai, complete genomeATP-binding component of phosphonate transport5e-43173
NC_011741:4395156:439943743994374399994558Escherichia coli IAI1 chromosome, complete genomeribose 1,5-bisphosphokinase5e-43173
NC_011415:4582388:458680745868074587364558Escherichia coli SE11 chromosome, complete genomeribose 1,5-bisphosphokinase5e-43173
NC_009800:4332229:434009543400954340652558Escherichia coli HS, complete genomephosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN5e-43173
CU928160:4395156:439943743994374399994558Escherichia coli IAI1 chromosome, complete genomeribose 1,5-bisphosphokinase5e-43173
NC_009801:4643000:464741146474114647968558Escherichia coli E24377A, complete genomephosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN5e-43173
CU928145:4695932:470021347002134700770558Escherichia coli 55989 chromosome, complete genomeribose 1,5-bisphosphokinase5e-43173
NC_011751:4795928:480163148016314802188558Escherichia coli UMN026 chromosome, complete genomeribose 1,5-bisphosphokinase3e-42171
NC_010498:4656716:466102246610224661579558Escherichia coli SMS-3-5, complete genomephosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN2e-42171
NC_008253:4541915:454813145481314548688558Escherichia coli 536, complete genomeATP-binding protein PhnN5e-42170
NC_007606:3842708:385694138569413857498558Shigella dysenteriae Sd197, complete genomeATP-binding component of phosphonate transport7e-42169
NC_011750:4719477:472379347237934724350558Escherichia coli IAI39 chromosome, complete genomeribose 1,5-bisphosphokinase7e-42169
NC_008740:257434:260167260167260736570Marinobacter aquaeolei VT8, complete genomephosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN1e-37155
NC_011770:1811874:181132618113261811883558Pseudomonas aeruginosa LESB58, complete genomeATP-binding component of phosphonate transport9e-36149
NC_008463:1756434:175759717575971758154558Pseudomonas aeruginosa UCBPP-PA14, complete genomeATP-binding component of phosphonate transport2e-35148
NC_008740:2563278:256693525669352567504570Marinobacter aquaeolei VT8, complete genomephosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN1e-34145
NC_007520:2305610:230676623067662307353588Thiomicrospira crunogena XCL-2, complete genomeGuanylate kinase/L-type calcium channel region2e-34145
NC_008786:3291700:330771633077163308282567Verminephrobacter eiseniae EF01-2, complete genomephosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN1e-26119
NC_003911:480202:480202480202480750549Silicibacter pomeroyi DSS-3, complete genomealkylphosphonate utilization protein PhnN1e-1789.4
NC_009616:99647:102961102961103575615Thermosipho melanesiensis BI429 chromosome, complete genomeguanylate kinase5e-1373.9
NC_011761:2031876:203707920370792037624546Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completePhnN protein9e-1063.2
NC_011206:1917408:192261119226111923156546Acidithiobacillus ferrooxidans ATCC 53993, complete genomehypothetical protein9e-1063.2
NC_011653:331986:336514336514337146633Thermosipho africanus TCF52B, complete genomegmk guanylate kinase6e-0960.5
NC_012785:1960500:197984919798491980481633Kosmotoga olearia TBF 19.5.1, complete genomeguanylate kinase3e-0858.5
NC_013192:1993718:199714119971411997686546Leptotrichia buccalis DSM 1135, complete genomeguanylate kinase4e-0857.8
NC_007912:4661141:468047146804714681148678Saccharophagus degradans 2-40, complete genomeGuanylate kinase1e-0756.2
NC_014532:3967463:398399839839983984630633Halomonas elongata DSM 2581, complete genomeguanylate kinase4e-0754.3
NC_011094:3778000:381826038182603818883624Salmonella enterica subsp. enterica serovar Schwarzengrund strguanylate kinase4e-0754.3
NC_021171:1354000:137461113746111375225615Bacillus sp. 1NLA3E, complete genomeguanylate kinase6e-0753.9
NC_013515:550464:564756564756565301546Streptobacillus moniliformis DSM 12112, complete genomeguanylate kinase8e-0753.5
NC_007498:1491223:150660715066071507239633Pelobacter carbinolicus DSM 2380, complete genomeguanylate kinase8e-0753.5
NC_004337:3590323:379174437917443792367624Shigella flexneri 2a str. 301, complete genomeguanylate kinase1e-0653.1
NC_011979:2352961:237877223787722379380609Geobacter sp. FRC-32, complete genomeGuanylate kinase1e-0653.1
NC_010694:63654:661296612966752624Erwinia tasmaniensis, complete genomeGuanylate kinase1e-0652.8
NC_002570:2616899:263210026321002632714615Bacillus halodurans C-125, complete genomeguanylate kinase1e-0652.8
NC_008800:36500:580715807158694624Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,guanylate kinase2e-0652
NC_011283:105245:105575105575106198624Klebsiella pneumoniae 342 chromosome, complete genomeguanylate kinase3e-0651.6
NC_020134:2193900:220046922004692201041573Clostridium stercorarium subsp. stercorarium DSM 8532, completeguanylate kinase Gmk3e-0651.6
NC_015873:1933036:193590019359001936514615Megasphaera elsdenii DSM 20460, complete genomeguanylate kinase4e-0651.2
NC_008260:187269:187269187269187892624Alcanivorax borkumensis SK2, complete genomeguanylate kinase5e-0650.8
NC_016816:127802:130261130261130884624Pantoea ananatis LMG 5342, complete genomeguanylate kinase7e-0650.4
NC_009648:4359875:437816143781614378784624Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeguanylate kinase7e-0650.4
NC_016845:5162481:518081651808165181439624Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,guanylate kinase7e-0650.4
NC_013956:4326388:434381043438104344484675Pantoea ananatis LMG 20103 chromosome, complete genomeGmk8e-0650.1
NC_009778:4014026:403195540319554032578624Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-0650.1
NC_020260:4029951:404789340478934048516624Cronobacter sakazakii Sp291, complete genomeguanylate kinase8e-0650.1
NC_012731:5074000:509228450922845092964681Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeguanylate kinase8e-0650.1
NC_015381:992401:101823010182301018904675Burkholderia gladioli BSR3 chromosome 1, complete sequenceguanylate kinase9e-0650.1
NC_014314:69872:833838338383964582Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeguanylate kinase9e-0650.1