Pre_GI: BLASTP Hits

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Query: NC_012917:3241196:3250738 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3250738, End: 3252405, Length: 1668

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011083:4547825:459941845994184600185768Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein4e-47189
NC_012691:1250385:1257539125753912590021464Tolumonas auensis DSM 9187, complete genomehypothetical protein1e-35151
NC_015424:3112637:3161632316163231631011470Aeromonas veronii B565 chromosome, complete genomehypothetical protein2e-1998.2
NC_014034:1418681:1428887142888714305541668Rhodobacter capsulatus SB1003 chromosome, complete genomehypothetical protein5e-1789.7
NC_009050:212270:2738632738632751521290Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencehypothetical protein2e-1584.7
NC_021184:1024305:1034569103456910359751407Desulfotomaculum gibsoniae DSM 7213, complete genomehypothetical protein4e-1480.1
NC_012521:1:3214321449291716Rhodococcus opacus B4 plasmid pROB02, complete sequencehypothetical protein1e-1379
NC_015578:1940097:1948866194886619508752010Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein7e-1375.9
NC_014973:3452100:3461099346109934626041506Geobacter sp. M18 chromosome, complete genomehypothetical protein1e-1275.1
CP002185:1493280:1513093151309315142021110Escherichia coli W, complete genomeconserved hypothetical protein2e-1274.7
CP002516:2580774:2591648259164825927571110Escherichia coli KO11, complete genomeputative ATP-dependent endonuclease (OLD family protein)2e-1274.7
NC_016902:2580774:2591648259164825927571110Escherichia coli KO11FL chromosome, complete genomeputative ATP-dependent endonuclease (OLD family protein)2e-1274.7
NC_008782:867344:8685818685818699781398Acidovorax sp. JS42, complete genomehypothetical protein6e-1273.2
NC_015410:2838132:2848182284818228500831902Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein1e-1172
NC_002506:207097:2177582177582188821125Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-1171.2
NC_009456:998935:1007212100721210083361125Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein2e-1171.2
NC_012580:207025:2176862176862188101125Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein2e-1171.2
NC_012583:242760:2526332526332537571125Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-1171.2
NC_012667:46432:5470954709558331125Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-1171.2
NC_016446:979884:9905339905339916571125Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein2e-1171.2
NC_016945:207089:2177382177382188621125Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-1171.2
NC_009720:4124255:4143750414375041450361287Xanthobacter autotrophicus Py2, complete genomehypothetical protein3e-1170.9
NC_010162:10962500:1097143210971432109733301899Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-1170.5
NC_008740:1635137:1643936164393616451111176Marinobacter aquaeolei VT8, complete genomehypothetical protein8e-1168.9
NC_008536:2079052:2086235208623520873801146Solibacter usitatus Ellin6076, complete genomehypothetical protein9e-1168.9
NC_013456:212150:2201522201522212851134Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein2e-1068.2
NC_014394:1658357:1675095167509516762221128Gallionella capsiferriformans ES-2 chromosome, complete genomeputative ATPase; putative exported protein2e-1068.2
CU928160:4570498:4593108459310845942651158Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein, putative P-loop containing nucleoside triphosphate hydrolases3e-1067.4
NC_011741:4570498:4593108459310845942651158Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-1067.4
NC_014958:557208:5669595669595685121554Deinococcus maricopensis DSM 21211 chromosome, complete genomehypothetical protein3e-1067.4
NC_011726:3051408:3051408305140830525441137Cyanothece sp. PCC 8801, complete genomehypothetical protein4e-1067
NC_014034:1394898:1405490140549014066081119Rhodobacter capsulatus SB1003 chromosome, complete genomehypothetical protein5e-0963.2
NC_012489:3425416:3432117343211734336971581Gemmatimonas aurantiaca T-27, complete genomehypothetical protein1e-0862
NC_003911:1791878:1799149179914918007441596Silicibacter pomeroyi DSS-3, complete genomehypothetical protein1e-0862
NC_015711:6522808:655070665507066551377672Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein2e-0861.6
NC_013730:4118355:4123661412366141247521092Spirosoma linguale DSM 74, complete genomeputative ATP-dependent endonuclease (OLD family protein)2e-0860.8
NC_009454:136468:1493581493581504491092Pelotomaculum thermopropionicum SI, complete genomehypothetical protein7e-0859.3
NC_015554:4824000:4828726482872648299971272Alteromonas sp. SN2 chromosome, complete genomehypothetical protein1e-0758.5
NC_013956:3273340:328452632845263285299774Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-0757.8
NC_007677:1354500:138968413896841390334651Salinibacter ruber DSM 13855, complete genomehypothetical protein3e-0757
NC_008043:615049:6292926292926308241533Silicibacter sp. TM1040 mega plasmid, complete sequencehypothetical protein7e-0756.2
NC_016940:190986:1976891976892005292841Saprospira grandis str. Lewin chromosome, complete genomehypothetical protein1e-0655.1
NC_002939:173833:1814111814111827661356Geobacter sulfurreducens PCA, complete genomehypothetical protein2e-0654.7
NC_009832:2211154:2221222222122222225291308Serratia proteamaculans 568, complete genomehypothetical protein3e-0653.9