Pre_GI: BLASTP Hits

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Query: NC_012917:2921932:2933844 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2933844, End: 2934545, Length: 702

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:1970686:198177319817731982474702Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-122439
NC_014121:1357339:138242913824291383127699Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeWbqC-like family protein2e-76285
NC_008060:3155133:315513331551333155885753Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencehypothetical protein7e-66250
NC_007512:865500:880460880460881158699Pelodictyon luteolum DSM 273, complete genomehypothetical protein3e-58224
NC_006138:23902:423134231343002690Desulfotalea psychrophila LSv54, complete genomehypothetical protein4e-41167
NC_007651:3656433:365993436599343660644711Burkholderia thailandensis E264 chromosome I, complete sequenceWbnG4e-40164
NC_015968:2845751:284802028480202848724705Enterobacter asburiae LF7a chromosome, complete genomeWbqC-like family protein1e-39162
NC_004347:3303957:332274833227483323470723Shewanella oneidensis MR-1, complete genomehypothetical protein1e-33143
NC_012881:4023895:403166240316624032366705Desulfovibrio salexigens DSM 2638, complete genomeWbqC-like family protein2e-32139
NC_009831:3612206:362618836261883626886699Shewanella sediminis HAW-EB3, complete genomehypothetical protein4e-26118
NC_002928:123126:136026136026136745720Bordetella parapertussis 12822, complete genomehypothetical protein2e-21102
NC_008228:3679949:369075736907573691467711Pseudoalteromonas atlantica T6c, complete genomehypothetical protein6e-1891.3
NC_016112:3103716:313679131367913137528738Methylomicrobium alcaliphilum chromosome, complete genomehypothetical protein3e-1788.6
NC_013204:799857:816866816866817588723Eggerthella lenta DSM 2243, complete genomeWbqC-like family protein3e-1788.6
NC_008510:1339926:136124013612401361923684Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,hypothetical protein1e-1686.7
NC_008508:1382036:140335914033591404042684Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,hypothetical protein1e-1686.7
NC_018645:4104302:412778641277864128493708Desulfobacula toluolica Tol2, complete genomehypothetical protein2e-1582.4
NC_020418:603750:620210620210620920711Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-1479.7
NC_007954:1494291:151403615140361514761726Shewanella denitrificans OS217, complete genomehypothetical protein1e-1479.7
NC_007796:3379614:339371933937193394414696Methanospirillum hungatei JF-1, complete genomehypothetical protein2e-1479.3
NC_017068:2436960:248642424864242487182759Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein3e-1375.5
NC_009719:3532587:354513735451373545835699Parvibaculum lavamentivorans DS-1 chromosome, complete genomeWbqC-like family protein8e-1373.9
NC_012491:5628000:564535056453505646036687Brevibacillus brevis NBRC 100599, complete genomehypothetical protein1e-1273.2
NC_018643:1037456:104583010458301046516687Alpha proteobacterium HIMB5 chromosome, complete genomeWbqC-like protein4e-1272
NC_008380:855246:871887871887872579693Rhizobium leguminosarum bv. viciae 3841, complete genomehypothetical protein5e-1168.2
NC_016604:297687:319654319654320478825Mycobacterium rhodesiae NBB3 chromosome, complete genomeWbqC-like protein1e-1067
NC_008702:2942246:295588229558822956574693Azoarcus sp. BH72, complete genomeconserved hypothetical protein7e-1064.3
NC_002755:1684161:169688316968831697578696Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein3e-0962
NC_000962:1684005:169672716967271697422696Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein3e-0962
NC_009525:1685522:169824416982441698939696Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein3e-0962
NC_015848:1708176:172090217209021721597696Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein3e-0962
NC_012943:2707677:271604427160442716739696Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein3e-0962
NC_016768:2704350:271271727127172713412696Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein3e-0962
NC_017026:1686500:169774916977491698444696Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein3e-0962
NC_019950:1689910:170148717014871702182696Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein3e-0962
NC_009565:1688642:170136417013641702059696Mycobacterium tuberculosis F11, complete genomehypothetical protein3e-0962