Pre_GI: BLASTP Hits

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Query: NC_012811:1138897:1142728 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Start: 1142728, End: 1143561, Length: 834

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009659:3384997:340890234089023409699798Janthinobacterium sp. Marseille chromosome, complete genomephosphonate ABC-type transport system permease2e-91335
NC_009138:3153576:317380131738013174598798Herminiimonas arsenicoxydans, complete genomePhosphite transport system permease protein ptxC2e-91335
NC_015422:2078618:208862220886222089419798Alicycliphilus denitrificans K601 chromosome, complete genomephosphonate ABC transporter inner membrane subunit3e-90331
NC_009649:16907:366623666237501840Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,phosphate ABC transporter permease3e-89328
NC_008740:1414926:143712914371291437959831Marinobacter aquaeolei VT8, complete genomephosphonate ABC transporter, inner membrane subunit2e-88325
NC_010002:2933909:294407629440762944876801Delftia acidovorans SPH-1, complete genomephosphonate ABC transporter, inner membrane subunit1e-82306
NC_007973:3240866:325093432509343251734801Ralstonia metallidurans CH34 chromosome 1, complete sequencePhosphonate uptake transporter1e-82306
NC_015563:4773415:479526947952694796114846Delftia sp. Cs1-4 chromosome, complete genomephosphonate ABC transporter inner membrane subunit2e-47189
NC_011353:5240020:525249852524985253277780Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephosphonate ABC transporter permease3e-46185
NC_007613:4156841:417163441716344172413780Shigella boydii Sb227, complete genomemembrane channel protein component of Pn transporter8e-46184
NC_007384:4530000:454124345412434542022780Shigella sonnei Ss046, complete genomemembrane channel protein component of Pn transporter6e-46184
NC_002655:5194804:520728352072835208113831Escherichia coli O157:H7 EDL933, complete genomemembrane channel protein component of Pn transporter5e-46184
NC_007606:3842708:384984738498473850677831Shigella dysenteriae Sd197, complete genomemembrane channel protein component of Pn transporter5e-46184
NC_002695:5164819:517729851772985178128831Escherichia coli O157:H7 str. Sakai, complete genomemembrane channel protein component of Pn transporter5e-46184
NC_013008:5196080:520855952085595209389831Escherichia coli O157:H7 str. TW14359 chromosome, complete genomemembrane channel protein component of Pn transporter5e-46184
NC_013941:5013695:502616450261645026994831Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephosphonate ABC transporter permease5e-46184
NC_010468:4305105:431073943107394311518780Escherichia coli ATCC 8739, complete genomephosphonate ABC transporter, inner membrane subunit1e-45183
CU928160:4395156:440635544063554407134780Escherichia coli IAI1 chromosome, complete genomephosphonates transport system, permease protein1e-45183
CP002185:4566150:458093445809344581713780Escherichia coli W, complete genomephosphonate ABC transporter, inner membrane subunit1e-45183
NC_009801:4643000:465432946543294655108780Escherichia coli E24377A, complete genomephosphonate ABC transporter, permease protein1e-45183
NC_011741:4395156:440635544063554407134780Escherichia coli IAI1 chromosome, complete genomephosphonates transport system, permease1e-45183
NC_012947:4106031:411206441120644112843780Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completephosphonate ABC transporter permease1e-45183
NC_011750:4719477:473077947307794731558780Escherichia coli IAI39 chromosome, complete genomephosphonates transport system permease1e-45183
NC_008253:4541915:455504945550494555828780Escherichia coli 536, complete genomephosphonates transport system permease protein PhnE9e-46183
NC_009800:4332229:434701343470134347792780Escherichia coli HS, complete genomephosphonate ABC transporter, permease protein1e-45183
NC_016822:4686971:469817046981704698949780Shigella sonnei 53G, complete genomemembrane channel protein component of Pn transporter1e-45183
NC_010498:4656716:466794046679404668719780Escherichia coli SMS-3-5, complete genomephosphonate ABC transporter, permease protein1e-45183
NC_011751:4795928:480854948085494809328780Escherichia coli UMN026 chromosome, complete genomephosphonates transport system, permease protein1e-45183
AP010958:5022196:503353250335325034362831Escherichia coli O103:H2 str. 12009 DNA, complete genomephosphonate/organophosphate ester transporter subunit PhnE2e-45182
NC_013353:5022196:503353250335325034362831Escherichia coli O103:H2 str. 12009, complete genomephosphonate/organophosphate ester transporter subunit PhnE2e-45182
NC_013364:5040268:505505250550525055882831Escherichia coli O111:H- str. 11128, complete genomephosphonate/organophosphate ester transporter subunit PhnE2e-45182
NC_014118:1331164:134576213457621346601840Burkholderia sp. CCGE1002 chromosome chromosome 2, completephosphonate ABC transporter, inner membrane subunit2e-45182
NC_011415:4582388:459372545937254594504780Escherichia coli SE11 chromosome, complete genomephosphonate ABC transporter permease2e-45182
NC_008563:4656000:466899046689904669832843Escherichia coli APEC O1, complete genomePhnE, subunit of alkylphosphonate ABC transporter2e-45182
NC_011742:4569683:458351845835184584360843Escherichia coli S88 chromosome, complete genomephosphonates transport system, permease protein2e-45182
NC_012967:4289929:430126543012654302083819Escherichia coli B str. REL606 chromosome, complete genomephosphonate/organophosphate ester transporter2e-45182
NC_004431:4867648:488148348814834882325843Escherichia coli CFT073, complete genomemembrane channel protein component of Pn transporter2e-45182
CU928145:4695932:470719747071974708039843Escherichia coli 55989 chromosome, complete genomephosphonates transport system, permease protein1e-45182
NC_011748:4695932:470719747071974708039843Escherichia coli 55989, complete genomephosphonates transport system, permease protein1e-45182
NC_008312:7635217:763780776378077638544738Trichodesmium erythraeum IMS101, complete genomephosphonate ABC transporter, inner membrane subunit7e-45181
NC_008312:7635217:763858476385847639378795Trichodesmium erythraeum IMS101, complete genomephosphonate ABC transporter, inner membrane subunit4e-44178
NC_004193:375416:627205627205628011807Oceanobacillus iheyensis HTE831, complete genomealkylphosphonate ABC tranporter permease6e-39161
NC_015224:1641819:165741316574131658285873Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative ABC transport membrane permease2e-37156
NC_006395:217139:242112242112242990879Haloarcula marismortui ATCC 43049 plasmid pNG700, completephosphonates ABC transporter permease protein2e-37156
NC_012731:1088321:111033811103381111252915Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative inner membrane permease of ABC transporter3e-37155
NC_008800:3123495:312841331284133129216804Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative ABC transport membrane permease3e-37155
NC_009648:293052:325875325875326747873Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein7e-37154
NC_008358:2574343:2582416258241625834381023Hyphomonas neptunium ATCC 15444, complete genomephosphonate ABC transporter, permease protein9e-37154
NC_009720:4367584:438819743881974389015819Xanthobacter autotrophicus Py2, complete genomephosphonate ABC transporter, inner membrane subunit1e-36153
NC_004193:375416:628011628011628826816Oceanobacillus iheyensis HTE831, complete genomealkylphosphonate ABC tranporter permease1e-35150
NC_014727:186000:188634188634189446813Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,ABC phosphate/phosphonate transporter permease6e-35147
NC_007925:4294472:429447242944724295293822Rhodopseudomonas palustris BisB18, complete genomePhosphonate uptake transporter1e-33143
NC_008740:3602367:360318236031823603997816Marinobacter aquaeolei VT8, complete genomephosphonate ABC transporter, inner membrane subunit2e-32139
NC_014727:186000:187834187834188634801Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,ABC phosphate/phosphonate transporter permease4e-31135
NC_007492:2771021:278501227850122785779768Pseudomonas fluorescens PfO-1, complete genomePhosphonate uptake transporter5e-29128
NC_015224:1641819:165827516582751659180906Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative ABC transport membrane permease4e-29128
NC_008800:3123495:312750831275083128413906Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative ABC transport membrane permease4e-29128
NC_010501:4787963:480482048048204805647828Pseudomonas putida W619, complete genomebinding-protein-dependent transport systems inner membrane component4e-28125
NC_018664:1:1799817998195781581Clostridium acidurici 9a chromosome, complete genomeABC phosphonate transporter permease protein4e-27122
NC_009439:3535152:353864435386443539405762Pseudomonas mendocina ymp, complete genomephosphonate ABC transporter, inner membrane subunit6e-27121
NC_008740:3602367:360236736023673603185819Marinobacter aquaeolei VT8, complete genomephosphonate ABC transporter, inner membrane subunit1e-26120
NC_009439:3535152:353782035378203538647828Pseudomonas mendocina ymp, complete genomephosphonate ABC transporter, inner membrane subunit9e-26117
NC_012560:1965251:196449619644961965254759Azotobacter vinelandii DJ, complete genomephosphonate ABC transporter, permease component7e-26117
NC_021150:1965264:196450919645091965267759Azotobacter vinelandii CA6, complete genomephosphonate ABC transporter, permease component7e-26117
NC_011983:760113:7620767620767634221347Agrobacterium radiobacter K84 chromosome 2, complete genomephosphonate ABC transporter, permease protein7e-26117
NC_015873:63487:7632176321778681548Megasphaera elsdenii DSM 20460, complete genomephosphonate transport system permease protein2e-25116
NC_009720:4367584:438739143873914388197807Xanthobacter autotrophicus Py2, complete genomephosphonate ABC transporter, inner membrane subunit2e-25116
NC_012560:1965251:196525119652511966081831Azotobacter vinelandii DJ, complete genomephosphonate ABC transporter, permease component3e-25115
NC_021150:1965264:196526419652641966094831Azotobacter vinelandii CA6, complete genomephosphonate ABC transporter, permease component3e-25115
NC_007925:4294472:429529542952954296137843Rhodopseudomonas palustris BisB18, complete genomePhosphonate uptake transporter2e-24112
NC_007492:2771021:278577627857762786603828Pseudomonas fluorescens PfO-1, complete genomePhosphonate uptake transporter5e-24111
NC_015278:1960774:196077419607741961577804Aerococcus urinae ACS-120-V-Col10a chromosome, complete genomephosphonate ABC transporter, permease protein PhnE2e-23110
NC_000913:4307471:432046643204664320834369Escherichia coli K12, complete genomephosphonate/organophosphate ester transporter (pseudogene)9e-24110
NC_009648:293052:324994324994325878885Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomemembrane channel protein component of Pn transporter1e-22107
NC_007760:535825:5393135393135410431731Anaeromyxobacter dehalogenans 2CP-C, complete genomeABC phosphonate transporter, fused inner membrane subunits2e-22106
NC_012731:1088321:110945711094571110341885Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative inner membrane permease of ABC transporter2e-22106
NC_011983:760113:761087761087762067981Agrobacterium radiobacter K84 chromosome 2, complete genomephosphonate ABC transporter, permease protein1e-21103
NC_007633:952728:9548629548629575972736Mycoplasma capricolum subsp. capricolum ATCC 27343, completealkylphosphonate ABC transporter, permease protein1e-20100
NC_014751:946155:9483229483229510572736Mycoplasma leachii PG50 chromosome, complete genomephosphonate ABC transporter, permease protein PhnE1e-20100
NC_015391:504227:518386518386519177792Carnobacterium sp. 17-4 chromosome, complete genometransporter1e-1893.6
NC_019902:831911:8544888544888564851998Thioalkalivibrio nitratireducens DSM 14787, complete genomePhosphonate ABC transporter permease protein phnE21e-1687.4
NC_010501:4787963:480405648040564804823768Pseudomonas putida W619, complete genomephosphonate ABC transporter, inner membrane subunit8e-1581.3
NC_021182:3525523:352927435292743530059786Clostridium pasteurianum BC1, complete genomeABC-type phosphate/phosphonate transport system, permease component2e-1479.7
NC_000913:4307471:432068443206844321304621Escherichia coli K12, complete genomephosphonate/organophosphate ester transporter subunit7e-1477.8
CP002516:4431235:443730544373054438155851Escherichia coli KO11, complete genome8e-1477.8
NC_015391:504227:519174519174520046873Carnobacterium sp. 17-4 chromosome, complete genometransporter4e-1375.5
NC_013192:232778:256941256941257747807Leptotrichia buccalis DSM 1135, complete genomebinding-protein-dependent transport systems inner membrane component7e-1374.7
NC_021182:3525523:352840835284083529274867Clostridium pasteurianum BC1, complete genomeABC-type phosphate/phosphonate transport system, permease component2e-1273.6
NC_013192:232778:257782257782258576795Leptotrichia buccalis DSM 1135, complete genomebinding-protein-dependent transport systems inner membrane component2e-1169.7
NC_010334:3040589:3057701305770130592541554Shewanella halifaxensis HAW-EB4, complete genomebinding-protein-dependent transport systems inner membrane component1e-0963.9
NC_014210:5370868:5382898538289853841271230Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,binding-protein-dependent transport systems inner membrane component3e-0962.4
NC_014222:1188719:121230112123011212999699Methanococcus voltae A3 chromosome, complete genomepolar amino acid ABC transporter, inner membrane subunit1e-0860.5
NC_018664:2279687:228646322864632287131669Clostridium acidurici 9a chromosome, complete genomeD-methionine ABC transporter permease protein MetI1e-0860.5
NC_011963:1482042:148487114848711485491621Rhodobacter sphaeroides KD131 chromosome 1, complete sequencebinding-protein-dependent transport system inner membrane protein3e-0859.3
NC_015847:909938:930852930852931685834Methanococcus maripaludis XI chromosome, complete genomebinding-protein dependent transport system inner membrane protein1e-0757.4
NC_005791:837505:858699858699859532834Methanococcus maripaludis S2, complete genomeABC-type proline/glycine betaine transport system, permease component related protein1e-0757.4
NC_005071:835005:8567388567388583031566Prochlorococcus marinus str. MIT 9313, complete genomeputative phosphonate ABC transporter1e-0757
NC_013921:1344000:134976213497621350415654Thermoanaerobacter italicus Ab9 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-0757
NC_014209:1363151:136980713698071370460654Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,binding-protein-dependent transport systems inner membrane component3e-0756.2
NC_014222:1:147021470215538837Methanococcus voltae A3 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component8e-0754.7
NC_014538:1125000:113976011397601140413654Thermoanaerobacter sp. X513 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component6e-0754.7
NC_014964:1353939:135956813595681360221654Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completebinding-protein-dependent transport systems inner membrane component6e-0754.7
NC_010320:1769486:177396917739691774622654Thermoanaerobacter sp. X514 chromosome, complete genomebinding-protein-dependent transport system inner membrane protein6e-0754.7
NC_010321:1361748:136737713673771368030654Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completebinding-protein-dependent transport system inner membrane protein6e-0754.7
NC_015958:1465631:147187814718781472531654Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeABC transporter integral membrane subunit6e-0754.7
NC_009615:4693164:469577346957734696588816Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycine betaine/L-proline transport system permease1e-0654.3
NC_014817:1063173:108460410846041085275672Asticcacaulis excentricus CB 48 chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component1e-0653.9
NC_009832:4136878:415124041512404151893654Serratia proteamaculans 568, complete genomebinding-protein-dependent transport systems inner membrane component1e-0653.9
NC_015566:4205854:422014942201494220802654Serratia sp. AS12 chromosome, complete genomeABC transporter integral membrane protein1e-0653.5
NC_013714:796442:799570799570800229660Bifidobacterium dentium Bd1, complete genomePermease protein of ABC transporter system2e-0653.1
NC_005090:1812833:184033618403361840986651Wolinella succinogenes DSM 1740, complete genomeABC TRANSPORTER PERMEASE COMPONENT3e-0652.8
NC_015733:2581324:262021326202132621145933Pseudomonas putida S16 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-0652.8
NC_004557:2475030:247973424797342480561828Clostridium tetani E88, complete genomeputative glycine-betaine binding permease protein3e-0652.4
NC_020063:2785652:280777028077702808435666Enterobacteriaceae bacterium strain FGI 57, complete genomeABC-type metal ion transport system, permease component4e-0652.4
NC_009614:4844000:485117048511704852057888Bacteroides vulgatus ATCC 8482 chromosome, complete genomeABC transporter permease7e-0651.6
NC_007492:3180480:3205029320502932071252097Pseudomonas fluorescens PfO-1, complete genomeGlycine betaine/L-proline ABC transporter, ATPase/permease fusion protein, putative5e-0651.6
NC_006347:3166000:316679731667973167672876Bacteroides fragilis YCH46, complete genomeputative ABC transporter permease protein5e-0651.6
NC_003228:3212500:322817732281773229052876Bacteroides fragilis NCTC 9343, complete genomephosphate transport system permease protein5e-0651.6
NC_016776:3258939:326558532655853266460876Bacteroides fragilis 638R, complete genomephosphate transport system permease5e-0651.6
NC_017150:2290681:229002622900262290700675Acetobacter pasteurianus IFO 3283-01-42C, complete genomeD-methionine transporter permease protein7e-0651.2
NC_017146:2383509:238350923835092384183675Acetobacter pasteurianus IFO 3283-26, complete genomeD-methionine transporter permease protein7e-0651.2
NC_017125:2383467:238346723834672384141675Acetobacter pasteurianus IFO 3283-22, complete genomeD-methionine transporter permease protein7e-0651.2
NC_017100:2383487:238348723834872384161675Acetobacter pasteurianus IFO 3283-03, complete genomeD-methionine transporter permease protein7e-0651.2
NC_014837:2758239:275760227576022758258657Pantoea sp. At-9b chromosome, complete genomebinding-protein-dependent transporter inner membrane component8e-0651.2
NC_010334:4925936:492593649259364926835900Shewanella halifaxensis HAW-EB4, complete genomebinding-protein-dependent transport systems inner membrane component1e-0550.8