Pre_GI Gene

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Host: NC_008800 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008800:3123495 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
312349531250961602branched chain amino acid ABC transporter permeaseQuickGO ontologyBLASTP
312517231264401269putative substrate-binding periplasmic transport proteinQuickGO ontologyBLASTP
31267843127254471hypothetical proteinBLASTP
31275083128413906putative ABC transport membrane permeaseQuickGO ontologyBLASTP
31284133129216804putative ABC transport membrane permeaseQuickGO ontologyBLASTP
31293453130274930putative substrate-binding periplasmic transport proteinQuickGO ontologyBLASTP
31303113131147837putative ABC transport ATP-binding subunitQuickGO ontologyBLASTP
31313443131619276hypothetical proteinBLASTP
313174731328501104hypothetical proteinBLASTP
31332273133568342hypothetical proteinBLASTP
31336323134171540adenylate cyclase 2QuickGO ontologyBLASTP
313437231360841713D-lactate dehydrogenaseQuickGO ontologyBLASTP
31364323137367936D-alanyl-D-alanine endopeptidaseQuickGO ontologyBLASTP
31378503138482633hypothetical proteinBLASTP
31385513139489939tRNA-dihydrouridine synthase CQuickGO ontologyBLASTP
314054931419041356ATP-dependent RNA helicase RhlEQuickGO ontologyBLASTP