Pre_GI: BLASTP Hits

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Query: NC_012808:3972983:3984731 Methylobacterium extorquens AM1, complete genome

Start: 3984731, End: 3985495, Length: 765

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018679:2541986:256141325614132562273861Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeenoyl-CoA hydratase3e-22105
NC_015733:3595882:359819435981943598940747Pseudomonas putida S16 chromosome, complete genomeenoyl-CoA hydratase/isomerase4e-2098.6
NC_015856:633353:637088637088637852765Collimonas fungivorans Ter331 chromosome, complete genomeenoyl-CoA hydratase4e-2098.6
NC_015563:4206112:421795742179574218691735Delftia sp. Cs1-4 chromosome, complete genomeenoyl-CoA hydratase/isomerase2e-1479.3
NC_007974:2097334:209733420973342098128795Ralstonia metallidurans CH34 chromosome 2, complete sequenceEnoyl-CoA hydratase/isomerase2e-1376.6
NC_015497:4564339:458630745863074587107801Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomephenylacetate degradation, enoyl-CoA hydratase paaB2e-1376.3
NC_011894:4013830:405045840504584051168711Methylobacterium nodulans ORS 2060, complete genomeEnoyl-CoA hydratase/isomerase8e-1270.9
NC_014259:3984568:400603540060354006808774Acinetobacter sp. DR1 chromosome, complete genomeenoyl-CoA hydratase1e-1170.1
NC_002570:207555:217631217631218404774Bacillus halodurans C-125, complete genomeenoyl-CoA hydratase3e-1169.3
NC_014722:1084616:109034810903481091124777Burkholderia rhizoxinica HKI 454, complete genomeEnoyl-CoA hydratase2e-1169.3
NC_014228:4408500:441474944147494415522774Xenorhabdus nematophila ATCC 19061, complete genomeenoyl-CoA hydratase-isomerase, phenylacetic acid degradation (strain W)3e-1168.9
NC_009720:1006201:101960910196091020385777Xanthobacter autotrophicus Py2, complete genomeenoyl-CoA hydratase/isomerase6e-1168.2
NC_013730:778076:790261790261791058798Spirosoma linguale DSM 74, complete genomeEnoyl-CoA hydratase/isomerase1e-1067.4
NC_013892:114884:125205125205125978774Xenorhabdus bovienii SS-2004 chromosome, complete genomeenoyl-CoA hydratase-isomerase, phenylacetic acid degradation (strain W)1e-1066.6
NC_013892:114884:124404124404125201798Xenorhabdus bovienii SS-2004 chromosome, complete genomeacyl-CoA hydratase2e-1066.2
NC_012522:7871173:787117378711737871994822Rhodococcus opacus B4, complete genomeenoyl-CoA hydratase3e-1065.9
NC_008687:45967:674296742968199771Paracoccus denitrificans PD1222 chromosome 2, complete sequenceEnoyl-CoA hydratase/isomerase4e-1065.5
NC_007974:2097334:212060121206012121422822Ralstonia metallidurans CH34 chromosome 2, complete sequenceEnoyl-CoA hydratase/isomerase4e-1065.5
NC_008786:2022683:202440820244082025214807Verminephrobacter eiseniae EF01-2, complete genomeEnoyl-CoA hydratase/isomerase3e-1065.5
NC_018581:1718023:176483117648311765706876Gordonia sp. KTR9 chromosome, complete genomeEnoyl-CoA hydratase / carnithine racemase4e-1065.1
NC_014158:1479313:148642614864261487226801Tsukamurella paurometabola DSM 20162 chromosome, complete genomeEnoyl-CoA hydratase/isomerase5e-1064.7
NC_017506:1:605126051261312801Marinobacter adhaerens HP15 chromosome, complete genomeenoyl-CoA hydratase/isomerase7e-1064.7
NC_015733:2963548:298186229818622982653792Pseudomonas putida S16 chromosome, complete genomeenoyl-CoA hydratase8e-1064.3
NC_020133:5020500:502271250227125023485774Mycobacterium liflandii 128FXT, complete genomeenoyl-CoA hydratase EchA89e-1064.3
NC_010612:5403000:540526054052605406033774Mycobacterium marinum M, complete genomeenoyl-CoA hydratase EchA89e-1064.3
NC_016048:2678205:271478227147822715558777Oscillibacter valericigenes Sjm18-20, complete genome3-hydroxybutyryl-CoA dehydratase9e-1063.9
NC_015580:3834244:383935138393513840094744Novosphingobium sp. PP1Y, complete genomeenoyl-CoA hydratase2e-0963.2
NC_013939:1841890:185271918527191853558840Deferribacter desulfuricans SSM1, complete genome3-hydroxybutyryl-CoA dehydratase2e-0962.8
NC_008699:833737:854737854737855504768Nocardioides sp. JS614, complete genomeEnoyl-CoA hydratase/isomerase2e-0962.8
NC_011961:85083:873238732388093771Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceenoyl-coa hydratase, (shortchain enoyl-coa hydratase) (sceh) (enoyl-coa hydratase 1)3e-0962.4
NC_016948:3023940:303770730377073038465759Mycobacterium intracellulare MOTT-64 chromosome, complete genomeenoyl-CoA hydratase/isomerase3e-0962.4
NC_010623:1871492:190704619070461907810765Burkholderia phymatum STM815 chromosome 2, complete sequenceEnoyl-CoA hydratase/isomerase3e-0962.4
NC_000854:1:350353503535787753Aeropyrum pernix K1, complete genomeenoyl-CoA hydratase/isomerase family protein3e-0962
NC_016830:4010637:401170740117074012507801Pseudomonas fluorescens F113 chromosome, complete genomeEnoyl-CoA hydratase5e-0961.6
NC_015677:1460000:147322514732251474019795Ramlibacter tataouinensis TTB310 chromosome, complete genomeunsaturated acyl-CoA hydratase5e-0961.6
NC_008061:2153495:217296221729622173750789Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceEnoyl-CoA hydratase/isomerase5e-0961.6
NC_008543:90312:960239602396811789Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceEnoyl-CoA hydratase/isomerase5e-0961.6
NC_009952:3522370:354287035428703543646777Dinoroseobacter shibae DFL 12, complete genomeenoyl-CoA hydratase/isomerase6e-0961.2
NC_008268:7180663:719381071938107194610801Rhodococcus sp. RHA1, complete genomeprobable enoyl-CoA hydratase6e-0961.2
NC_013510:1295439:131036213103621311255894Thermomonospora curvata DSM 43183, complete genomeEnoyl-CoA hydratase/isomerase7e-0961.2
NC_004557:2552418:256657725665772567359783Clostridium tetani E88, complete genomeenoyl-CoA hydratase7e-0960.8
NC_010002:1879220:195432319543231955114792Delftia acidovorans SPH-1, complete genomeEnoyl-CoA hydratase/isomerase8e-0960.8
NC_007164:453743:468240468240469037798Corynebacterium jeikeium K411, complete genomeenoyl-CoA hydratase1e-0860.5
NC_008268:3233961:324804232480423248842801Rhodococcus sp. RHA1, complete genomeprobable enoyl-CoA hydratase2e-0860.1
NC_010397:815549:829922829922830734813Mycobacterium abscessus chromosome Chromosome, complete sequencePutative enoyl-CoA hydratase/isomerase2e-0860.1
NC_013510:3117837:314782531478253148610786Thermomonospora curvata DSM 43183, complete genomeEnoyl-CoA hydratase/isomerase1e-0860.1
NC_015673:106038:122333122333123118786Corynebacterium resistens DSM 45100 chromosome, complete genomeenoyl-CoA hydratase2e-0859.7
NC_012726:2461102:248245024824502483247798Sulfolobus islandicus M.16.4 chromosome, complete genomeEnoyl-CoA hydratase/isomerase2e-0859.7
NC_012632:2564801:258614925861492586946798Sulfolobus islandicus M.16.27 chromosome, complete genomeEnoyl-CoA hydratase/isomerase2e-0859.7
NC_012588:2483000:250205625020562502853798Sulfolobus islandicus M.14.25 chromosome, complete genomeenoyl-CoA hydratase/isomerase2e-0859.7
NC_005966:1832066:1836465183646518375681104Acinetobacter sp. ADP1, complete genomeputative enoyl-CoA hydratase (PaaG-like)3e-0859.3
NC_015733:2963548:298103329810332981827795Pseudomonas putida S16 chromosome, complete genomeenoyl-CoA hydratase-isomerase2e-0859.3
NC_012721:770651:785861785861786694834Burkholderia glumae BGR1 chromosome 2, complete genomeEnoyl-CoA hydratase/aldolase2e-0859.3
NC_015422:4508028:4534938453493845370372100Alicycliphilus denitrificans K601 chromosome, complete genome3-hydroxybutyryl-CoA epimerase2e-0859.3
NC_016885:2294000:231912723191272319921795Pyrobaculum oguniense TE7 chromosome, complete genomeenoyl-CoA hydratase/carnithine racemase3e-0858.9
NC_014366:1435785:146128314612831462164882Gamma proteobacterium HdN1, complete genomeEnoyl-CoA hydratase/isomerase3e-0858.9
NC_017275:2519637:254098525409852541782798Sulfolobus islandicus HVE10/4 chromosome, complete genomeenoyl-CoA hydratase/isomerase5e-0858.5
NC_017179:1133510:114086411408641141661798Clostridium difficile BI1, complete genome3-hydroxybutyryl-CoA dehydratase5e-0858.2
NC_013315:1123733:113108711310871131884798Clostridium difficile CD196 chromosome, complete genome3-hydroxybutyryl-CoA dehydratase5e-0858.2
NC_012589:2605085:262475126247512625548798Sulfolobus islandicus L.S.2.15, complete genomeEnoyl-CoA hydratase/isomerase7e-0857.8
NC_012623:2680601:270026527002652701062798Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeenoyl-CoA hydratase/isomerase7e-0857.8
NC_013769:2591065:261051626105162611313798Sulfolobus islandicus L.D.8.5 chromosome, complete genomehypothetical protein7e-0857.8
NC_017276:2391645:241299324129932413790798Sulfolobus islandicus REY15A chromosome, complete genomeenoyl-CoA hydratase/isomerase8e-0857.4
NC_007517:2494000:250360325036032504391789Geobacter metallireducens GS-15, complete genomeEnoyl-CoA hydratase/isomerase9e-0857.4
NC_002570:207555:218407218407219189783Bacillus halodurans C-125, complete genomeenoyl-CoA hydratase9e-0857.4
NC_012726:346539:365506365506366249744Sulfolobus islandicus M.16.4 chromosome, complete genomeEnoyl-CoA hydratase/isomerase9e-0857.4
NC_020829:4429435:4439128443912844412392112Pseudomonas denitrificans ATCC 13867, complete genomeshort chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase9e-0857.4
NC_015573:813000:856359856359857141783Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeEnoyl-CoA hydratase/isomerase1e-0757
NC_014259:3984568:4004997400499740060221026Acinetobacter sp. DR1 chromosome, complete genomeputative enoyl-CoA hydratase/isomerase family protein1e-0757
NC_014220:481923:491797491797492576780Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeEnoyl-CoA hydratase/isomerase1e-0757
NC_010501:3671517:368495636849563685747792Pseudomonas putida W619, complete genomeEnoyl-CoA hydratase/isomerase1e-0757
NC_012589:347020:365769365769366512744Sulfolobus islandicus L.S.2.15, complete genomeEnoyl-CoA hydratase/isomerase2e-0756.6
NC_017276:337286:358463358463359206744Sulfolobus islandicus REY15A chromosome, complete genomeEnoyl-CoA hydratase/isomerase2e-0756.6
NC_013769:316789:354059354059354802744Sulfolobus islandicus L.D.8.5 chromosome, complete genomeEnoyl-CoA hydratase/isomerase2e-0756.6
NC_007503:1534162:155370715537071554507801Carboxydothermus hydrogenoformans Z-2901, complete genomeenoyl-CoA hydratase/isomerase family protein2e-0756.6
NC_011004:4183993:421769442176944218584891Rhodopseudomonas palustris TIE-1, complete genomeEnoyl-CoA hydratase/isomerase2e-0756.2
NC_014220:481923:492703492703493482780Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeEnoyl-CoA hydratase/isomerase3e-0755.8
NC_009012:1857845:187662918766291877375747Clostridium thermocellum ATCC 27405, complete genomeEnoyl-CoA hydratase/isomerase3e-0755.8
NC_008595:1869284:187866618786661879424759Mycobacterium avium 104, complete genomeenoyl-CoA isomerase4e-0755.5
NC_016906:2871272:287214428721442872965822Gordonia polyisoprenivorans VH2 chromosome, complete genomeenoyl-CoA hydratase4e-0755.5
NC_016906:3286384:328638432863843287211828Gordonia polyisoprenivorans VH2 chromosome, complete genomeenoyl-CoA hydratase4e-0755.5
NC_016885:2294000:231106223110622311853792Pyrobaculum oguniense TE7 chromosome, complete genomeenoyl-CoA hydratase/carnithine racemase4e-0755.5
NC_009720:1006201:1027725102772510297852061Xanthobacter autotrophicus Py2, complete genome3-hydroxyacyl-CoA dehydrogenase NAD-binding3e-0755.5
NC_010617:558954:558127558127558957831Kocuria rhizophila DC2201, complete genomeputative enoyl-CoA hydratase3e-0755.5
NC_010170:1219641:121884412188441219644801Bordetella petrii, complete genomeputative enoyl-CoA hydratase4e-0755.1
NC_008278:2882567:288621628862162887007792Frankia alni ACN14a, complete genomePutative enoyl-CoA hydratase5e-0755.1
NC_007517:2494000:249764324976432498440798Geobacter metallireducens GS-15, complete genomeEnoyl-CoA hydratase/isomerase5e-0755.1
NC_008268:3418000:343129734312973432070774Rhodococcus sp. RHA1, complete genomepossible enoyl-CoA hydratase6e-0754.7
NC_014220:481923:497096497096497896801Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeEnoyl-CoA hydratase/isomerase6e-0754.7
NC_020125:27213:272132721328013801Riemerella anatipestifer RA-CH-2, complete genomeEnoyl-CoA hydratase/carnithine racemase6e-0754.7
NC_003366:128783:131191131191131967777Clostridium perfringens str. 13, complete genomecrotonase6e-0754.7
NC_012726:255774:2768402768402788311992Sulfolobus islandicus M.16.4 chromosome, complete genome3-hydroxyacyl-CoA dehydrogenase9e-0754.3
NC_009454:489954:506609506609507391783Pelotomaculum thermopropionicum SI, complete genomeenoyl-CoA hydratase/carnithine racemase9e-0754.3
NC_019904:56145:702777027771059783Echinicola vietnamensis DSM 17526 chromosome, complete genomeenoyl-CoA hydratase/carnithine racemase8e-0754.3
NC_014758:310394:348104348104348895792Calditerrivibrio nitroreducens DSM 19672 chromosome, completeshort chain enoyl-CoA hydratase8e-0754.3
NC_012588:800942:806078806078806842765Sulfolobus islandicus M.14.25 chromosome, complete genomeenoyl-CoA hydratase/isomerase8e-0754.3
NC_012632:884811:891400891400892164765Sulfolobus islandicus M.16.27 chromosome, complete genomeEnoyl-CoA hydratase/isomerase8e-0754.3
NC_009698:3275839:328407632840763284858783Clostridium botulinum A str. Hall chromosome, complete genome3-hydroxybutyryl-CoA dehydratase8e-0754.3
NC_004193:701622:718119718119718928810Oceanobacillus iheyensis HTE831, complete genomeenoyl CoA hydratase7e-0754.3
NC_010516:3466000:347929234792923480074783Clostridium botulinum B1 str. Okra, complete genome3-hydroxybutyryl-CoA dehydratase7e-0754.3
NC_019962:1750497:186477118647711865559789Natrinema pellirubrum DSM 15624, complete genomeenoyl-CoA hydratase/carnithine racemase1e-0653.9
NC_018581:3253731:3255863325586332582352373Gordonia sp. KTR9 chromosome, complete genomeAcetyl-CoA acetyltransferase1e-0653.9
NC_015573:2900906:292488929248892925674786Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome3-hydroxybutyryl-CoA dehydratase1e-0653.9
NC_012622:681472:721463721463722227765Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeEnoyl-CoA hydratase/isomerase9e-0753.9
NC_013769:826933:842041842041842805765Sulfolobus islandicus L.D.8.5 chromosome, complete genomeEnoyl-CoA hydratase/isomerase9e-0753.9
NC_008262:2498000:251139525113952512177783Clostridium perfringens SM101, complete genome3-hydroxybutyryl-CoA dehydratase1e-0653.5
NC_007974:2097334:215800721580072158801795Ralstonia metallidurans CH34 chromosome 2, complete sequenceEnoyl-CoA hydratase/isomerase1e-0653.5
NC_007503:1111457:115099311509931151766774Carboxydothermus hydrogenoformans Z-2901, complete genome3-hydroxybutyryl-CoA dehydratase1e-0653.5
NC_012521:148886:161475161475162299825Rhodococcus opacus B4 plasmid pROB02, complete sequenceenoyl-CoA hydratase/isomerase family protein2e-0653.1
NC_010674:370629:381125381125381907783Clostridium botulinum B str. Eklund 17B, complete genome3-hydroxybutyryl-CoA dehydratase2e-0653.1
NC_014393:3650957:366252136625213663303783Clostridium cellulovorans 743B chromosome, complete genomeEnoyl-CoA hydratase/isomerase2e-0653.1
NC_016885:1153277:116700211670021167766765Pyrobaculum oguniense TE7 chromosome, complete genomeenoyl-CoA hydratase/carnithine racemase2e-0653.1
NC_012623:2555000:2572971257297125749621992Sulfolobus islandicus Y.N.15.51 chromosome, complete genome3-hydroxyacyl-CoA dehydrogenase2e-0653.1
NC_015422:1694363:171730717173071718092786Alicycliphilus denitrificans K601 chromosome, complete genomeenoyl-CoA hydratase/isomerase2e-0652.8
NC_015976:814922:834922834922835755834Sphingobium sp. SYK-6, complete genomeferuloyl-CoA hydratase/lyase2e-0652.8
NC_002939:1505701:150570115057011506483783Geobacter sulfurreducens PCA, complete genome3-hydroxybutyryl-CoA dehydratase2e-0652.8
NC_002570:1220180:123177012317701232552783Bacillus halodurans C-125, complete genomeenoyl-CoA hydratase2e-0652.8
NC_012589:260703:2791892791892811801992Sulfolobus islandicus L.S.2.15, complete genome3-hydroxyacyl-CoA dehydrogenase NAD-binding2e-0652.8
NC_017275:698854:706325706325707089765Sulfolobus islandicus HVE10/4 chromosome, complete genomeEnoyl-CoA hydratase/isomerase3e-0652.4
NC_010723:371741:376505376505377287783Clostridium botulinum E3 str. Alaska E43, complete genome3-hydroxybutyryl-CoA dehydratase3e-0652.4
NC_015576:3976679:403398640339864034756771Mycobacterium sp. JDM601 chromosome, complete genomeenoyl-CoA hydratase EchA83e-0652.4
NC_014228:4408500:441552644155264416323798Xenorhabdus nematophila ATCC 19061, complete genomeacyl-CoA hydratase, phenylacetic acid degradation (strain W)3e-0652.4
NC_016943:3270308:329951932995193300298780Blastococcus saxobsidens DD2, complete genomeEnoyl-CoA hydratase3e-0652.4
NC_021182:1473535:147941914794191480207789Clostridium pasteurianum BC1, complete genomeenoyl-CoA hydratase/carnithine racemase3e-0652.4
NC_013124:1544821:156283215628321563566735Acidimicrobium ferrooxidans DSM 10331, complete genomeEnoyl-CoA hydratase/isomerase4e-0652
NC_003106:91339:9133991339932971959Sulfolobus tokodaii str. 7, complete genomehypothetical 3-hydroxybutyryl-CoA dehydrogenase4e-0652
NC_015458:3390674:3399313339931334014032091Pusillimonas sp. T7-7 chromosome, complete genomefatty oxidation complex, alpha subunit4e-0652
NC_008611:1015138:103886410388641039667804Mycobacterium ulcerans Agy99, complete genomeenoyl-CoA hydratase EchA103e-0652
NC_008358:1861505:188251018825101883307798Hyphomonas neptunium ATCC 15444, complete genomeenoyl-CoA hydratase5e-0651.6
NC_008314:477722:478750478750479553804Ralstonia eutropha H16 chromosome 2, complete sequenceEnoyl-CoA hydratase5e-0651.6
NC_014330:768232:782611782611783387777Brachyspira pilosicoli 95/1000 chromosome, complete genome3-hydroxybutyryl-CoA dehydrogenase5e-0651.6
NC_019908:2401577:243771924377192438495777Brachyspira pilosicoli P43/6/78 chromosome, complete genome3-hydroxybutyryl-CoA dehydrogenase5e-0651.6
NC_018607:2111581:212563421256342126410777Brachyspira pilosicoli B2904 chromosome, complete genome3-hydroxybutyryl-CoA dehydrogenase6e-0651.6
NC_008268:7180663:720800972080097208917909Rhodococcus sp. RHA1, complete genomeprobable enoyl-CoA hydratase7e-0651.2
NC_007722:2172000:217206621720662172860795Erythrobacter litoralis HTCC2594, complete genomeprobable enoyl CoA hydratase6e-0651.2
NC_015656:2433370:243337024333702434173804Frankia symbiont of Datisca glomerata chromosome, complete genomeenoyl-CoA hydratase/isomerase8e-0650.8
NC_003106:51854:646466464665410765Sulfolobus tokodaii str. 7, complete genomehypothetical enoyl-CoA hydratase8e-0650.8
NC_021171:1689518:169951616995161700298783Bacillus sp. 1NLA3E, complete genomeenoyl-CoA hydratase9e-0650.8
NC_011969:4235818:424419442441944244970777Bacillus cereus Q1 chromosome, complete genomeenoyl-CoA hydratase9e-0650.8
NC_011658:4301633:431136543113654312141777Bacillus cereus AH187 chromosome, complete genomeenoyl-CoA hydratase9e-0650.8
NC_005957:4311679:432141143214114322187777Bacillus thuringiensis serovar konkukian str. 97-27, completeenoyl-CoA hydratase9e-0650.8