Pre_GI: BLASTP Hits

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Query: NC_012660:2143376:2157439 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2157439, End: 2158428, Length: 990

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:4708220:4730218473021847312251008Pseudomonas syringae pv. tomato str. DC3000, complete genomecobalamin synthesis protein/P47K family protein6e-114410
NC_015733:3736104:379811437981143798605492Pseudomonas putida S16 chromosome, complete genomecobalamin biosynthesis-like protein1e-57223
NC_013739:2106662:213646321364632137458996Conexibacter woesei DSM 14684, complete genomecobalamin synthesis protein P47K4e-57222
NC_017986:4790482:4815015481501548161091095Pseudomonas putida ND6 chromosome, complete genomecobalamin synthesis protein2e-54213
NC_010161:2548254:2574558257455825756281071Bartonella tribocorum CIP 105476, complete genomehypothetical protein8e-45181
NC_015186:1504275:152879115287911529753963Acidiphilium multivorum AIU301, complete genomeputative cobalamin synthesis protein3e-41169
NC_015733:3736104:3771298377129837723801083Pseudomonas putida S16 chromosome, complete genomeputative CobW protein involved in cobalamin synthesis1e-40167
NC_009937:4350132:435322143532214354210990Azorhizobium caulinodans ORS 571, complete genomeputative cobalamin synthesis protein7e-36151
NC_011985:3380842:3382498338249833836731176Agrobacterium radiobacter K84 chromosome 1, complete genomecobalamin synthesis protein3e-35149
NC_015733:2658337:267535726753572676310954Pseudomonas putida S16 chromosome, complete genomecobalamin synthesis protein P47K1e-33144
NC_006513:1379735:1388949138894913900191071Azoarcus sp. EbN1, complete genomehypothetical protein, putative GTPase3e-33142
NC_005956:1455496:1455496145549614565241029Bartonella henselae str. Houston-1, complete genomehypothetical protein1e-32140
NC_013194:1040197:1041851104185110429181068Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completecobalamin synthesis protein P47K1e-31137
NC_005070:2374850:2384966238496623863481383Synechococcus sp. WH 8102, complete genomehypothetical protein4e-31135
NC_012880:1091486:109674010967401097702963Dickeya dadantii Ech703, complete genomecobalamin synthesis protein P47K5e-31135
NC_009832:622969:644582644582645544963Serratia proteamaculans 568, complete genomecobalamin synthesis protein P47K6e-29128
NC_004129:5781413:578444857844485785374927Pseudomonas fluorescens Pf-5, complete genomecobalamin synthesis protein/P47K family protein5e-29128
NC_015567:547500:571355571355572317963Serratia sp. AS9 chromosome, complete genomecobalamin synthesis protein P47K1e-28127
NC_015566:547387:571169571169572131963Serratia sp. AS12 chromosome, complete genomecobalamin synthesis protein P47K1e-28127
NC_011294:4604283:461851746185174619473957Salmonella enterica subsp. enterica serovar Enteritidis strGTP-binding protein YjiA3e-26119
NC_011274:4577402:459176845917684592724957Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91GTP-binding protein YjiA3e-26119
NC_011205:4761598:477582447758244776780957Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853GTP-binding protein YjiA3e-26119
NC_016831:4556761:457112745711274572083957Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-26119
NC_008319:1376938:1390388139038813914671080Synechococcus sp. CC9311, complete genomepossible CobW protein involved in cobalamin synthesis9e-26117
NC_009481:1638394:1656788165678816578791092Synechococcus sp. WH 7803 chromosome, complete genomeG3E family GTPase2e-25116
NC_007516:1439537:1441964144196414430821119Synechococcus sp. CC9605, complete genomehypothetical protein1e-24114
NC_010468:4059436:406555740655574066513957Escherichia coli ATCC 8739, complete genomecobalamin synthesis protein P47K1e-23110
NC_007348:2558500:257851225785122579468957Ralstonia eutropha JMP134 chromosome 2, complete sequenceCobalamin synthesis protein/P47K:Cobalamin synthesis CobW, C-terminal2e-23110
NC_012658:1617902:162569916256991626628930Clostridium botulinum Ba4 str. 657 chromosome, complete genomeCobW/P47K family protein3e-22106
NC_011958:1031592:106717410671741068121948Rhodobacter sphaeroides KD131 chromosome 2, complete genomeCobalamin synthesis protein, P47K4e-21102
NC_016641:4151403:4151403415140341524941092Paenibacillus terrae HPL-003 chromosome, complete genomecobalamin synthesis protein p47k8e-21101
NC_004459:1:113111312117987Vibrio vulnificus CMCP6 chromosome I, complete sequencePutative GTPase8e-21101
NC_015311:1612366:1635806163580616370141209Prevotella denticola F0289 chromosome, complete genomeCobW/P47K family protein3e-2099.8
NC_014933:3791840:3812963381296338141621200Bacteroides helcogenes P 36-108 chromosome, complete genomecobalamin synthesis protein P47K7e-2098.2
NC_014370:1117283:1117283111728311185481266Prevotella melaninogenica ATCC 25845 chromosome chromosome I,CobW/P47K family protein9e-2097.8
NC_020388:1582817:1584127158412715853441218Natronomonas moolapensis 8.8.11 complete genomeCobW domain protein1e-1997.4
NC_016941:433000:4466794466794478811203Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative cobalamin synthesis protein8e-1994.7
NC_010079:458940:4746874746874758891203Staphylococcus aureus subsp. aureus USA300_TCH1516, completecobalamin (vitamin B12) biosynthesis protein8e-1994.7
NC_007793:459045:4747924747924759941203Staphylococcus aureus subsp. aureus USA300, complete genomeputative cobalamin synthesis protein8e-1994.7
NC_009641:448640:4643884643884655901203Staphylococcus aureus subsp. aureus str. Newman chromosome,cobalamin synthesis protein8e-1994.7
NC_017341:472685:4876064876064888081203Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,putative GTPases (G3E family)8e-1994.7
NC_017347:469024:4839564839564851581203Staphylococcus aureus subsp. aureus T0131 chromosome, completeCobalamin synthesis protein8e-1994.7
NC_007622:416000:4350924350924362941203Staphylococcus aureus RF122, complete genomehypothetical protein1e-1894.4
NC_010322:6037566:6039201603920160404061206Pseudomonas putida GB-1 chromosome, complete genomecobalamin synthesis protein P47K1e-1894.4
NC_017338:436711:4515014515014527031203Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeputative GTPases (G3E family)1e-1894.4
NC_007513:1159497:1178767117876711798761110Synechococcus sp. CC9902, complete genomeputative cobalamin synthesis protein1e-1894.4
NC_015554:4648919:4653280465328046545301251Alteromonas sp. SN2 chromosome, complete genomecobalamin synthesis protein, P47K2e-1893.6
NC_017343:416834:4324224324224336241203Staphylococcus aureus subsp. aureus ECT-R 2, complete genomecobW/HypB/UreG, nucleotide-binding domain protein2e-1893.2
NC_002758:475516:4926524926524938541203Staphylococcus aureus subsp. aureus Mu50, complete genomeputative cobalamin synthesis protein2e-1893.2
NC_002745:450000:4681374681374693391203Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein2e-1893.2
NC_009487:486000:5033985033985046001203Staphylococcus aureus subsp. aureus JH9 chromosome, completecobalamin synthesis protein, P47K2e-1893.2
NC_009632:486331:5034685034685046701203Staphylococcus aureus subsp. aureus JH1 chromosome, completecobalamin synthesis protein P47K2e-1893.2
NC_013450:412122:4292584292584304601203Staphylococcus aureus subsp. aureus ED98, complete genomecobalamin synthesis protein, putative2e-1893.2
NC_018515:3108755:312617031261703127087918Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeGTPase, G3E family2e-1893.2
NC_017351:452000:4655514655514667531203Staphylococcus aureus subsp. aureus 11819-97 chromosome, completecobW/HypB/UreG, nucleotide-binding domain protein3e-1892.8
NC_007426:1134937:1150596115059611518821287Natronomonas pharaonis DSM 2160, complete genomehypothetical protein3e-1892.8
NC_015276:565701:5675995675995688101212Marinomonas mediterranea MMB-1 chromosome, complete genomecobalamin synthesis protein P47K3e-1892.8
NC_020181:527592:5372205372205384431224Enterobacter aerogenes EA1509E, complete genomePutative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family4e-1892.4
NC_009792:923155:9231559231559243781224Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-1892.4
NC_014915:2963500:3009608300960830107921185Geobacillus sp. Y412MC52 chromosome, complete genomecobalamin synthesis protein P47K4e-1892.4
NC_016906:839406:8493838493838506181236Gordonia polyisoprenivorans VH2 chromosome, complete genomeCobW family protein5e-1892
NC_009668:1591290:1605913160591316071181206Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencecobalamin synthesis protein P47K6e-1892
NC_015259:1803266:1818298181829818195001203Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTransposase IS116/IS110/IS902 family protein1e-1790.9
NC_019904:3216416:3216416321641632176121197Echinicola vietnamensis DSM 17526 chromosome, complete genomeGTPase, G3E family1e-1790.9
NC_014391:4617688:4622115462211546233411227Micromonospora aurantiaca ATCC 27029 chromosome, complete genomecobalamin synthesis protein P47K2e-1790.5
NC_016048:1390463:1402284140228414034081125Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-1789.7
NC_006677:2402282:2426805242680524280071203Gluconobacter oxydans 621H, complete genomehypothetical protein5e-1789
NC_002570:388000:395900395900396835936Bacillus halodurans C-125, complete genomehypothetical protein5e-1788.6
NC_013889:2561381:2561381256138125626311251Thioalkalivibrio sp. K90mix chromosome, complete genomecobalamin synthesis protein P47K5e-1788.6
NC_015186:2129046:2129046212904621309081863Acidiphilium multivorum AIU301, complete genomehypothetical protein6e-1788.6
NC_009952:2752500:2757530275753027587411212Dinoroseobacter shibae DFL 12, complete genomeputative 47 kDa protein8e-1788.2
NC_010104:1096081:1111408111140811126101203Brucella canis ATCC 23365 chromosome II, complete sequence47 kDa protein7e-1788.2
NC_010546:1175979:1190088119008811911281041Cyanothece sp. ATCC 51142 chromosome circular, complete sequencecobalamin biosynthesis protein/P47K7e-1788.2
NC_012778:2049694:2055929205592920570711143Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-1687.8
NC_016048:797762:8198458198458209631119Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-1687.4
NC_016048:1390463:1399475139947514006021128Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-1687.4
NC_004311:1096649:1111977111197711131791203Brucella suis 1330 chromosome II, complete sequencecobalamin synthesis protein/P47K family protein2e-1687
NC_010167:1287000:1305606130560613068081203Brucella suis ATCC 23445 chromosome II, complete sequencehypothetical protein2e-1687
NC_015858:1150446:1165530116553011667321203Brucella pinnipedialis B2/94 chromosome chromosome 2, completecobalamin synthesis protein/P47K family protein2e-1687
NC_002927:506183:5118095118095128191011Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-1687
NC_006933:1051873:1067089106708910682911203Brucella abortus biovar 1 str. 9-941 chromosome II, completecobalamin synthesis protein/P47K family protein2e-1686.7
NC_003318:183914:1862081862081874101203Brucella melitensis 16M chromosome II, complete sequenceLOW AFFINITY ZINC TRANSPORT MEMBRANE PROTEIN2e-1686.7
NC_010740:1051000:1066346106634610675481203Brucella abortus S19 chromosome 2, complete sequenceCobalamin synthesis protein/P47K2e-1686.7
NC_007624:1046500:1061845106184510630471203Brucella melitensis biovar Abortus 2308 chromosome II, completeATP/GTP-binding site motif A (P-loop):Cobalamin synthesis protein/P47K2e-1686.7
NC_013118:1109610:1124916112491611261181203Brucella microti CCM 4915 chromosome 2, complete genomecobalamin synthesis protein/P47K family protein2e-1686.7
NC_013956:4627890:4629634462963446308661233Pantoea ananatis LMG 20103 chromosome, complete genomeYeiR2e-1686.7
NC_008312:1600000:1602686160268616037321047Trichodesmium erythraeum IMS101, complete genomecobalamin biosynthesis protein CobW3e-1686.3
NC_016002:1765959:178359417835941784517924Pseudogulbenkiania sp. NH8B, complete genomeCobW family protein3e-1686.3
NC_014323:992978:1014058101405810152991242Herbaspirillum seropedicae SmR1 chromosome, complete genomecobalamin synthesis P47K protein4e-1685.9
NC_009925:6024888:6026770602677060278311062Acaryochloris marina MBIC11017, complete genomecobalamin biosynthesis protein CobW7e-1685.1
NC_002928:507749:5133735133735143831011Bordetella parapertussis 12822, complete genomehypothetical protein1e-1584.3
NC_015578:2727684:273571127357112736307597Treponema primitia ZAS-2 chromosome, complete genome1e-1584
NC_010505:5077162:507877250787725079764993Methylobacterium radiotolerans JCM 2831, complete genomecobalamin synthesis protein P47K6e-1582
NC_012438:565419:580206580206581138933Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomecobalamin synthesis protein/P47K6e-1581.6
NC_003552:5402000:5408234540823454095891356Methanosarcina acetivorans C2A, complete genomeCobW protein1e-1480.9
NC_015520:224136:228458228458229393936Mahella australiensis 50-1 BON chromosome, complete genomecobalamin synthesis protein P47K1e-1480.9
NC_016048:1390463:1406150140615014071721023Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein3e-1479.7
NC_020388:1582817:1582817158281715841271311Natronomonas moolapensis 8.8.11 complete genomeCobW domain protein5e-1479
NC_018867:2063741:207069820706982071336639Dehalobacter sp. CF chromosome, complete genomePutative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family7e-1478.6
NC_018866:2033960:204091720409172041555639Dehalobacter sp. DCA chromosome, complete genomePutative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family7e-1478.6
NC_011830:1190502:119697811969781197670693Desulfitobacterium hafniense DCB-2, complete genomecobalamin synthesis protein P47K1e-1377.8
NC_018876:2628966:2635117263511726363881272Methanolobus psychrophilus R15 chromosome, complete genomecobalamin synthesis protein, P47K1e-1377.8
NC_003552:5402000:5406278540627854077471470Methanosarcina acetivorans C2A, complete genomehypothetical protein1e-1377.4
NC_017387:1110412:112762111276211128619999Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomehypothetical protein1e-1377.4
NC_014614:86213:943659436595300936Clostridium sticklandii, complete genomeputative CobW/P47K family protein2e-1377
NC_014664:1669642:1669642166964216706761035Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomecobalamin biosynthesis protein CobW4e-1375.9
NC_014121:3553809:357160635716063572592987Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative cobalamin synthesis protein4e-1375.9
NC_003552:5402000:5417074541707454181771104Methanosarcina acetivorans C2A, complete genomecobalamin biosynthesis protein5e-1375.5
NC_005810:1413305:143659614365961437579984Yersinia pestis biovar Microtus str. 91001, complete genomeputative cobalamin synthesis protein1e-1274.3
NC_017265:2807302:283061328306132831596984Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-1274.3
NC_016584:3040887:304251830425183043150633Desulfosporosinus orientis DSM 765 chromosome, complete genomeGTPase, G3E family1e-1274.3
NC_008577:3485878:3507880350788035089921113Shewanella sp. ANA-3 chromosome 1, complete sequencecobalamin synthesis protein, P47K1e-1274.3
NC_003552:1008475:1012528101252810136311104Methanosarcina acetivorans C2A, complete genomehypothetical protein1e-1171.2
NC_004461:156479:178181178181179062882Staphylococcus epidermidis ATCC 12228, complete genomecobalamin synthesis related protein CobW2e-1170.1
NC_002976:2434880:243623224362322437113882Staphylococcus epidermidis RP62A, complete genomecobalamin synthesis protein, putative2e-1169.7
NC_008817:709370:7257947257947268461053Prochlorococcus marinus str. MIT 9515, complete genomeputative cobalamin synthesis protein8e-1168.2
NC_012121:1894148:191000519100051910889885Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein1e-1067.8
NC_007643:791500:7937407937407947921053Rhodospirillum rubrum ATCC 11170, complete genomecobalamin synthesis CobW protein4e-1065.9
NC_017904:2641270:2648251264825126492581008Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein9e-0961.2
NC_002944:1881405:1891954189195418929761023Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-0859.7
NC_011747:115864:1158641158641170571194Escherichia coli S88 plasmid pECOS88, complete sequenceconserved hypothetical protein; putative GTPase6e-0755.1
NC_009380:4729340:4730627473062747316941068Salinispora tropica CNB-440 chromosome, complete genomecobalamin synthesis protein, P47K6e-0755.1
NC_009837:127000:1296091296091308021194Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequencehypothetical protein7e-0755.1
NC_009792:923155:9295219295219307201200Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-0653.1
NC_020181:527592:5435865435865447851200Enterobacter aerogenes EA1509E, complete genomePutative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family2e-0653.1
NC_010322:6037566:603756660375666038537972Pseudomonas putida GB-1 chromosome, complete genomecobalamin synthesis protein P47K3e-0653.1