Pre_GI Gene

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Host: NC_011747 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011747:115864 Escherichia coli S88 plasmid pECOS88, complete sequence

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1158641170571194conserved hypothetical protein putative GTPaseQuickGO ontologyBLASTP
117190117507318putative transposase ORF B fragment IS2QuickGO ontologyBLASTP
117694118560867putative transposase fragmentQuickGO ontologyBLASTP
119120119308189hypothetical proteinBLASTP
119318120259942hypothetical proteinBLASTP
1210561224261371putative type I secretion outer membrane protein EtsCQuickGO ontologyBLASTP
1224301243701941putative type I secretion ATP binding protein EtsBQuickGO ontologyBLASTP
1243671255751209Putative type I secretion membrane-fusion protein EtsAQuickGO ontologyBLASTP
127008127898891transposase ORF B IS3 family IS51 groupQuickGO ontologyBLASTP
127895128221327transposase ORF A IS3 family IS51 groupQuickGO ontologyBLASTP
129343129732390hypothetical proteinBLASTP
129836130789954outer membrane proteaseQuickGO ontologyBLASTP
1312221323311110hemolysin HlyFQuickGO ontologyBLASTP
132394133302909conserved hypothetical protein putative Mig-14 proteinQuickGO ontologyBLASTP