Pre_GI: BLASTP Hits

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Query: NC_012483:3731542:3754841 Acidobacterium capsulatum ATCC 51196, complete genome

Start: 3754841, End: 3757594, Length: 2754

Host Lineage: Acidobacterium capsulatum; Acidobacterium; Acidobacteriaceae; Acidobacteriales; Acidobacteria; Bacteria

General Information: Isolated from acidic mine drainage in Yanahara mine, Okayama, Japan. Acidophilic bacterium. This genus comprises a number of species commonly found in water reservoirs, microbial mats, many different soil types, marine and freshwater sediments, as well as in hot-spring mats and sediments, etc. Furthermore, they sometimes form the dominant group in a habitat. These bacteria are involved in the first step of destruction of biologically complex molecules produced by autotrophic (capable of synthesizing their own nutrients) microorganisms. Acidobacterium capsulatum is an aerobic, mesophilic, chemo-organotroph able to use a variety of carbon sources and to grow up to pH 6.0. The species comprises several strains characterized by orange pigmentation, production of menoquinones as their sole quinones, and branched-chain iso fatty acids as their cell envelope components.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012483:3672768:3676616367661636793962781Acidobacterium capsulatum ATCC 51196, complete genomeconjugative relaxase domain protein01381
NC_016631:3917253:3931643393164339343962754Granulicella mallensis MP5ACTX8 chromosome, complete genomeconjugative relaxase domain-containing protein0898
NC_011891:1225000:1242880124288012456602781Anaeromyxobacter dehalogenans 2CP-1, complete genomeconjugative relaxase domain protein2e-93344
NC_009484:2660048:2674385267438526771562772Acidiphilium cryptum JF-5 chromosome, complete genomeexonuclease V subunit alpha2e-90334
NC_016626:1751159:1751159175115917542153057Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative traC, type IV secretion system8e-90332
NC_015377:34445:5672856728596222895Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequenceTrwC protein3e-86320
NC_011916:467106:4887684887684915782811Caulobacter crescentus NA1000 chromosome, complete genomeDNA relaxase/conjugal transfer nickase-helicase TrwC1e-77291
NC_013422:991500:1012572101257210154032832Halothiobacillus neapolitanus c2, complete genomeconjugative relaxase domain protein7e-77289
NC_015458:327009:3562813562813591782898Pusillimonas sp. T7-7 chromosome, complete genomeTrwC4e-73276
NC_010170:3944228:3975774397577439785002727Bordetella petrii, complete genomeconjugal transfer protein5e-71270
NC_010571:2423732:2437973243797324407052733Opitutus terrae PB90-1, complete genomeconjugative relaxase domain protein3e-67257
NC_013730:2359939:2384855238485523876142760Spirosoma linguale DSM 74, complete genomeconjugative relaxase domain protein4e-63243
NC_007575:1694877:1701208170120817045463339Sulfurimonas denitrificans DSM 1251, complete genomeexonuclease V subunit alpha2e-56221
NC_009007:57804:7601176011793463336Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequenceTraI1e-51205
NC_013132:7954000:7969595796959579722072613Chitinophaga pinensis DSM 2588, complete genomeconjugative relaxase domain protein7e-50199
NC_016609:4233701:4273299427329942760132715Niastella koreensis GR20-10 chromosome, complete genomeconjugative relaxase domain-containing protein2e-49198
NC_007722:2954876:2959510295951029620652556Erythrobacter litoralis HTCC2594, complete genomehypothetical protein4e-44180
NC_012483:729000:752677752677753114438Acidobacterium capsulatum ATCC 51196, complete genomeDNA helicase domain protein2e-42174
NC_008322:1186000:1188914118891411920213108Shewanella sp. MR-7, complete genomeTrwC protein5e-42173
NC_004460:708416:7159707159707217565787Vibrio vulnificus CMCP6 chromosome II, complete sequenceATP-dependent exoDNAse, alpha subunit1e-37159
NC_009998:62000:6726667266732265961Shewanella baltica OS195 plasmid pS19501, complete sequenceconjugative transfer relaxase protein TraI8e-36152
NC_015850:1006980:1016198101619810193653168Acidithiobacillus caldus SM-1 chromosome, complete genomeputative TraI protein3e-33144
NC_007722:851129:8691878691878720992913Erythrobacter litoralis HTCC2594, complete genomeTrwC protein8e-32139
NC_010606:25090:2872928729308792151Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceTrwC protein3e-30134
NC_007722:168937:1893461893461922582913Erythrobacter litoralis HTCC2594, complete genomeTrwC protein3e-30134
NC_007385:157516:1693421693421736254284Shigella sonnei Ss046 plasmid pSS_046, complete sequenceoriT nicking and unwinding protein, fragment3e-29131
NC_016846:24500:4675446754520125259Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,conjugal transfer nickase/helicase TraI2e-27125
NC_017319:192482:2005052005052039543450Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceOriT nicking and unwinding protein1e-26122
NC_004851:191709:2005772005772040773501Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceoriT nicking and unwinding protein1e-26122
NC_016585:116143:1339371339371372033267Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceputative ATP-dependent exoDNAse1e-26122
NC_010660:175200:1832651832651882354971Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence1e-26122
NC_007607:87000:96517965171007104194Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceoriT nicking and unwinding protein, fragment2e-26122
NC_007608:97092:1033061033061082044899Shigella boydii Sb227 plasmid pSB4_227, complete sequenceoriT nicking and unwinding protein, fragment2e-26121
NC_009378:106193:1061931061931114335241Yersinia pestis Pestoides F plasmid MT, complete sequenceconjugal transfer nickase/helicase TraI2e-25118
NC_014819:25765:4311743117462603144Asticcacaulis excentricus CB 48 plasmid pASTEX02, completeconjugative relaxase domain protein1e-23112
NC_011296:281930:2901722901722957035532Thermodesulfovibrio yellowstonii DSM 11347, complete genomehypothetical protein2e-23112
NC_007794:2304768:2324303232430323259311629Novosphingobium aromaticivorans DSM 12444, complete genomeTrwC protein2e-23111
NC_020453:3950838:3987555398755539886791125Agromonas oligotrophica S58 DNA, complete genomeputative ATP-dependent exoDNAse (exonuclease V) subunit alpha3e-22107
NC_015508:296856:2968562968563006473792Agrobacterium sp. H13-3 chromosome linear, complete sequenceConjugal transfer protein traA2e-20101
NC_010793:1811401:1869177186917718715432367Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA9e-2099.8
NC_010793:1158279:1162791116279111651962406Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA8e-2099.8
NC_010606:25090:3084530845319811137Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceTrwC protein2e-1998.6
NC_010943:3069082:3094419309441930971992781Stenotrophomonas maltophilia K279a, complete genomeputative conjugal transfer protein TraA4e-1997.4
NC_015671:557720:5632625632625661532892Cellvibrio gilvus ATCC 13127 chromosome, complete genomeTrwC relaxase2e-1895.1
NC_011991:65368:6536865368694384071Agrobacterium vitis S4 plasmid pAtS4b, complete sequenceTi-type conjugative transfer relaxase TraA3e-1894.4
NC_014816:1592799:1592799159279915960233225Asticcacaulis excentricus CB 48 chromosome 1, complete sequenceti-type conjugative transfer relaxase traa2e-1688.6
NC_019673:1988853:2027358202735820317464389Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1688.6
NC_009256:2945059:2956180295618029578051626Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein7e-1686.7
NC_014217:2020737:2020737202073720236942958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA1e-1585.9
NC_012803:3691:3912039120426443525Micrococcus luteus NCTC 2665, complete genomeconjugative relaxase domain protein, TrwC/TraI family2e-1585.5
NC_007958:4371125:4393639439363943967583120Rhodopseudomonas palustris BisB5, complete genomeMobA/MobL protein1e-1482.8
NC_010338:1216385:1217970121797012208282859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA2e-1481.6
NC_010793:1468849:1475436147543614782402805Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA4e-1481.3
NC_014217:2760898:2762803276280327657602958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA5e-1480.5
NC_009445:6424000:6443614644361464466253012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA2e-1378.6
NC_010793:1922000:1933705193370519347961092Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA3e-1378.2
NC_014006:3124818:3167502316750231703452844Sphingobium japonicum UT26S chromosome 1, complete genomeconjugal transfer protein TraA3e-1377.8
NC_007925:138927:1633911633911664953105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein5e-1377.4
NC_008278:6885254:6885254688525468896694416Frankia alni ACN14a, complete genomehypothetical protein; Putative conjugal transfer protein traA6e-1377
NC_009445:1316000:1316372131637213193262955Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA7e-1376.6
NC_002678:763808:7856497856497886963048Mesorhizobium loti MAFF303099, complete genomeprobable conjugal transfer protein traA8e-1376.6
NC_015675:5607297:5632354563235456354013048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA1e-1276.3
NC_009720:464078:4822914822914852482958Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA1e-1276.3
NC_017319:192482:198752198752199123372Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceOriT nicking and unwinding protein1e-1276.3
NC_012796:1600600:1609788160978816126312844Desulfovibrio magneticus RS-1, complete genomeconjugal transfer protein TraA1e-1276.3
NC_004851:191709:198803198803199195393Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceoriT nicking and unwinding protein1e-1276.3
NC_011365:1969198:198678719867871987755969Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTrwC relaxase9e-1376.3
NC_010338:359940:3722873722873751452859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA9e-1376.3
NC_007608:97092:102927102927103346420Shigella boydii Sb227 plasmid pSB4_227, complete sequenceoriT nicking and unwinding protein, fragment2e-1275.1
NC_009445:838281:8382818382818412923012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA2e-1275.1
NC_017044:702483:7137857137857179214137Rickettsia parkeri str. Portsmouth chromosome, complete genomeconjugal transfer protein TraA3e-1274.7
NC_010793:1695716:1698219169821917002312013Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA4e-1274.3
NC_007607:87000:960909609096509420Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceoriT nicking and unwinding protein, fragment5e-1273.9
NC_017028:1030000:1046311104631110504474137Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeconjugal transfer protein TraA5e-1273.9
NC_010793:1695716:1702951170295117046991749Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA8e-1273.2
NC_009338:2925286:2944475294447529503425868Mycobacterium gilvum PYR-GCK chromosome, complete genomeexonuclease V subunit alpha2e-1172
NC_013757:780835:7808357808357863455511Geodermatophilus obscurus DSM 43160, complete genomeTrwC relaxase2e-1172
NC_015675:4565500:4576462457646245795093048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA2e-1172
NC_009720:2945655:2945655294565529485852931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA2e-1172
NC_009720:251703:2737272737272766572931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA2e-1172
NC_007925:1085500:1087177108717710902813105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein4e-1171.2
NC_008726:3968222:3968222396822239740805859Mycobacterium vanbaalenii PYR-1, complete genomeATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like4e-1170.9
NC_008609:1976403:2006218200621820084042187Pelobacter propionicus DSM 2379, complete genomehelicase, RecD/TraA family2e-1068.6
NC_014830:3387479:3426762342676234300523291Intrasporangium calvum DSM 43043 chromosome, complete genomeTrwC relaxase3e-1067.8
NC_009467:117812:1390961390961441415046Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequencealdehyde dehydrogenase6e-1067
NC_015514:3508022:3522251352225135251422892Cellulomonas fimi ATCC 484 chromosome, complete genomeconjugative relaxase domain-containing protein1e-0965.9
NC_003910:187630:2001942001942025602367Colwellia psychrerythraea 34H, complete genomeputative helicase1e-0965.9
NC_010172:5447189:83038303105042202Methylobacterium extorquens PA1, complete genomehelicase, RecD/TraA family2e-0965.5
NC_008435:1131242:1160526116052611635463021Rhodopseudomonas palustris BisA53, complete genomeMobA/MobL protein4e-0964.3
NC_014215:1243125:1244941124494112479553015Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,5e-0963.9
NC_004851:191709:1992161992162005801365Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceoriT nicking and unwinding protein1e-0862.8
NC_015563:3203012:3211320321132032126211302Delftia sp. Cs1-4 chromosome, complete genomeconjugative relaxase domain-containing protein1e-0862.8
NC_017319:192482:1991441991442005081365Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceOriT nicking and unwinding protein1e-0862.8
NC_008699:1673181:1673181167318116785745394Nocardioides sp. JS614, complete genomeDNA primase catalytic core, N-terminal domain2e-0862
NC_015562:1413264:1422784142278414260893306Methanotorris igneus Kol 5 chromosome, complete genomeexodeoxyribonuclease V3e-0861.6
NC_014365:2037506:2040817204081720430452229Desulfarculus baarsii DSM 2075 chromosome, complete genomeATP-dependent RecD/TraA family DNA helicase3e-0861.6
NC_017955:1667500:1668039166803916735375499Modestobacter marinus, complete genomeDNA primase7e-0860.1
NC_011757:5693584:5700531570053157027832253Methylobacterium chloromethanicum CM4, complete genomehelicase, RecD/TraA family1e-0759.7
NC_014158:233733:2645282645282674012874Tsukamurella paurometabola DSM 20162 chromosome, complete genomeTrwC relaxase1e-0759.3
NC_010511:6067000:6080978608097860832122235Methylobacterium sp. 4-46 chromosome, complete genomerecombinase D1e-0759.3
NC_017955:3670670:3715007371500737204815475Modestobacter marinus, complete genomeDNA primase1e-0759.3
NC_010793:81219:8427684276864712196Orientia tsutsugamushi str. Ikeda, complete genomeexodeoxyribonuclease V alpha subunit2e-0758.9
NC_013729:2258582:2280446228044622851314686Kribbella flavida DSM 17836, complete genomeTrwC relaxase2e-0758.5
NC_013169:612456:6365886365886401423555Kytococcus sedentarius DSM 20547, complete genomeTrwC relaxase3e-0758.2
NC_011027:817311:8179938179938201942202Chlorobaculum parvum NCIB 8327, complete genomehelicase, RecD/TraA family4e-0757.8
NC_016943:1442885:1442885144288514483835499Blastococcus saxobsidens DD2, complete genomeDNA primase5e-0757.4
NC_016943:1422926:1442885144288514483835499Blastococcus saxobsidens DD2, complete genomeDNA primase5e-0757.4
NC_002179:667182:6852326852326874302199Chlamydophila pneumoniae AR39, complete genomeexodeoxyribonuclease V, alpha subunit6e-0757
NC_017285:671546:6896006896006917982199Chlamydophila pneumoniae LPCoLN chromosome, complete genomeRecD/TraA family helicase6e-0757
NC_010793:1158279:1165465116546511681372673Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraI1e-0656.2
NC_010793:1811401:1866236186623618689082673Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraI1e-0656.2
NC_010125:955863:9835099835099856952187Gluconacetobacter diazotrophicus PAl 5, complete genomeputative exodeoxyribonuclease V alpha chain1e-0656.2
NC_013235:2129982:2155767215576721594623696Nakamurella multipartita DSM 44233, complete genomeTrwC relaxase1e-0655.8
NC_012725:97681:109481109481109999519Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence2e-0655.5
NC_010125:2884762:2896416289641628986022187Gluconacetobacter diazotrophicus PAl 5, complete genomeputative exodeoxyribonuclease2e-0655.5
NC_017955:3057592:3092495309249530980295535Modestobacter marinus, complete genomeDNA primase2e-0655.5
NC_015573:776209:7777177777177798042088Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelicase, RecD/TraA family4e-0654.7
NC_018681:5551000:5551247555124755572405994Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein4e-0654.3
NC_009481:1365000:1385306138530613869191614Synechococcus sp. WH 7803 chromosome, complete genomeexodeoxyribonuclease V subunit alpha4e-0654.3
NC_013131:10370765:1038668610386686103908464161Catenulispora acidiphila DSM 44928, complete genomeTrwC relaxase7e-0653.5
NC_007794:2304768:232346423234642324249786Novosphingobium aromaticivorans DSM 12444, complete genomehypothetical protein8e-0653.5
NC_011365:1103927:1116217111621711184032187Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehelicase, RecD/TraA family9e-0653.1