Pre_GI: BLASTP Hits

Some Help

Query: NC_011989:2795811:2818905 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 2818905, End: 2820044, Length: 1140

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014377:1400544:1421569142156914226931125Thermosediminibacter oceani DSM 16646 chromosome, complete genomeL-alanine dehydrogenase3e-47189
NC_014206:771765:7918357918357929531119Geobacillus sp. C56-T3 chromosome, complete genomealanine dehydrogenase3e-46186
NC_013411:735838:7560817560817571991119Geobacillus sp. Y412MC61, complete genomealanine dehydrogenase3e-46186
NC_021184:2975975:2977435297743529785471113Desulfotomaculum gibsoniae DSM 7213, complete genomealanine dehydrogenase5e-45182
NC_014098:3133440:3154427315442731555511125Bacillus tusciae DSM 2912 chromosome, complete genomealanine dehydrogenase1e-44180
NC_020995:2636519:2656902265690226580081107Enterococcus casseliflavus EC20, complete genomealanine dehydrogenase1e-43177
NC_015589:2941953:2945221294522129463391119Desulfotomaculum ruminis DSM 2154 chromosome, complete genomealanine dehydrogenase4e-43176
NC_013171:1506500:1506711150671115078231113Anaerococcus prevotii DSM 20548, complete genomealanine dehydrogenase6e-43175
NC_011661:1049767:1066500106650010676241125Dictyoglomus turgidum DSM 6724, complete genomealanine dehydrogenase7e-42171
NC_015678:966000:9667789667789679291152Streptococcus parasanguinis ATCC 15912 chromosome, complete genomealanine dehydrogenase3e-41169
NC_008319:2007752:2011502201150220126141113Synechococcus sp. CC9311, complete genomealanine dehydrogenase2e-41169
NC_015671:2011462:2015205201520520163261122Cellvibrio gilvus ATCC 13127 chromosome, complete genomealanine dehydrogenase2e-40166
NC_021184:3940910:3940910394091039420341125Desulfotomaculum gibsoniae DSM 7213, complete genomealanine dehydrogenase2e-40166
NC_007930:50801:5080150801519041104Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,Alanine dehydrogenase4e-40166
NC_015572:2262374:2268831226883122699491119Methylomonas methanica MC09 chromosome, complete genomealanine dehydrogenase6e-39161
NC_012914:5372712:5381118538111853822451128Paenibacillus sp. JDR-2, complete genomealanine dehydrogenase8e-38158
NC_013222:2595315:2606845260684526080411197Robiginitalea biformata HTCC2501, complete genomealanine dehydrogenase3e-37156
NC_011899:2286884:2293797229379722948221026Halothermothrix orenii H 168, complete genomealanine dehydrogenase5e-37155
NC_015732:2057895:2078739207873920798511113Spirochaeta caldaria DSM 7334 chromosome, complete genomealanine dehydrogenase2e-36153
NC_009943:1262000:1262321126232112634361116Candidatus Desulfococcus oleovorans Hxd3, complete genomealanine dehydrogenase3e-36152
NC_008541:1931266:1951358195135819524761119Arthrobacter sp. FB24 chromosome 1, complete sequencealanine dehydrogenase2e-35150
NC_002937:614000:6363746363746374861113Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completealanine dehydrogenase4e-35149
NC_008751:2774000:2777100277710027782121113Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomealanine dehydrogenase4e-35149
NC_018721:297906:3055693055693066541086Psychroflexus torquis ATCC 700755 chromosome, complete genomealanine dehydrogenase6e-35148
NC_014751:946155:9653649653649664821119Mycoplasma leachii PG50 chromosome, complete genomealanine dehydrogenase8e-35147
NC_009727:1177390:1193076119307611941851110Coxiella burnetii Dugway 7E9-12, complete genomealanine dehydrogenase3e-34146
NC_010475:2896000:2897987289798728990751089Synechococcus sp. PCC 7002, complete genomealanine dehydrogenase5e-33142
NC_004463:1898648:1902960190296019040721113Bradyrhizobium japonicum USDA 110, complete genomealanine dehydrogenase6e-33142
NC_017317:1598925:1612473161247316135851113Corynebacterium ulcerans 809 chromosome, complete genomeAlanine dehydrogenase6e-33142
NC_014734:2285762:2285762228576222869701209Paludibacter propionicigenes WB4 chromosome, complete genomealanine dehydrogenase/pnt domain protein4e-31135
NC_018868:282738:3011473011473022651119Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomealanine dehydrogenase4e-31135
NC_017338:1419500:1460671146067114617891119Staphylococcus aureus subsp. aureus JKD6159 chromosome, completealanine dehydrogenase 24e-31135
NC_017353:2353665:2371210237121023723281119Staphylococcus lugdunensis N920143, complete genomealanine dehydrogenase 29e-31134
NC_013893:2373730:2393696239369623948141119Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeAlanine dehydrogenase9e-31134
NC_007347:1239982:1253716125371612548311116Ralstonia eutropha JMP134 chromosome 1, complete sequenceAlanine dehydrogenase and pyridine nucleotide transhydrogenase1e-30134
NC_016912:1374351:1412794141279414139121119Staphylococcus aureus subsp. aureus VC40 chromosome, completealanine dehydrogenase2e-30134
NC_007795:1370500:1409132140913214102501119Staphylococcus aureus subsp. aureus NCTC 8325, complete genomealanine dehydrogenase2e-30134
NC_014006:3124818:3126595312659531277281134Sphingobium japonicum UT26S chromosome 1, complete genomealanine dehydrogenase3e-30133
NC_002953:1464693:1501394150139415025121119Staphylococcus aureus subsp. aureus MSSA476, complete genomealanine dehydrogenase 22e-30133
NC_003923:1436139:1475688147568814768061119Staphylococcus aureus subsp. aureus MW2, complete genomealanine dehydrogenase2e-30133
NC_017303:1454841:1470228147022814713371110Corynebacterium pseudotuberculosis I19 chromosome, complete genomeAlanine dehydrogenase8e-30131
NC_002952:1497785:1539564153956415406821119Staphylococcus aureus subsp. aureus MRSA252, complete genomealanine dehydrogenase 27e-30131
NC_009782:1510396:1552047155204715531651119Staphylococcus aureus subsp. aureus Mu3, complete genomealanine dehydrogenase7e-30131
NC_002758:1508996:1550647155064715517651119Staphylococcus aureus subsp. aureus Mu50, complete genomealanine dehydrogenase7e-30131
NC_002745:1432585:1474235147423514753531119Staphylococcus aureus subsp. aureus N315, complete genomealanine dehydrogenase7e-30131
NC_002951:1474465:1515797151579715169151119Staphylococcus aureus subsp. aureus COL, complete genomealanine dehydrogenase7e-30131
NC_007793:1451409:1492510149251014936281119Staphylococcus aureus subsp. aureus USA300, complete genomealanine dehydrogenase7e-30131
NC_010079:1465356:1506457150645715075751119Staphylococcus aureus subsp. aureus USA300_TCH1516, completealanine dehydrogenase7e-30131
NC_017351:1464209:1505745150574515068631119Staphylococcus aureus subsp. aureus 11819-97 chromosome, completealanine dehydrogenase7e-30131
NC_017347:1483163:1524259152425915253771119Staphylococcus aureus subsp. aureus T0131 chromosome, completeAlanine dehydrogenase 17e-30131
NC_017343:1391124:1432775143277514338931119Staphylococcus aureus subsp. aureus ECT-R 2, complete genomealanine dehydrogenase7e-30131
NC_017341:1482882:1523978152397815250961119Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,alanine dehydrogenase 27e-30131
NC_009641:1470500:1511977151197715130951119Staphylococcus aureus subsp. aureus str. Newman chromosome,alanine dehydrogenase7e-30131
NC_009487:1557248:1599015159901516001331119Staphylococcus aureus subsp. aureus JH9 chromosome, completealanine dehydrogenase7e-30131
NC_016112:562570:5850955850955862011107Methylomicrobium alcaliphilum chromosome, complete genomealanine dehydrogenase1e-29130
NC_016928:1440319:1481498148149814826161119Staphylococcus aureus subsp. aureus M013 chromosome, completealanine dehydrogenase1e-29130
NC_016941:1411500:1436770143677014378881119Staphylococcus aureus subsp. aureus MSHR1132, complete genomealanine dehydrogenase 12e-29130
NC_013450:1446952:1488483148848314896011119Staphylococcus aureus subsp. aureus ED98, complete genomealanine dehydrogenase4e-29129
NC_015976:1893076:1933867193386719349851119Sphingobium sp. SYK-6, complete genomealanine dehydrogenase4e-29129
NC_009523:1101214:1123841112384111249321092Roseiflexus sp. RS-1 chromosome, complete genomeNAD(P) transhydrogenase subunit alpha4e-28125
NC_017337:1478448:1517205151720515183231119Staphylococcus aureus subsp. aureus ED133 chromosome, completealanine dehydrogenase6e-28125
NC_016511:2389273:2393834239383423949461113Propionibacterium acnes TypeIA2 P.acn31 chromosome, completealanine dehydrogenase2e-21103
NC_016511:2389273:2403877240387724049891113Propionibacterium acnes TypeIA2 P.acn31 chromosome, completealanine dehydrogenase2e-21103
NC_016512:2388612:2393173239317323942851113Propionibacterium acnes TypeIA2 P.acn17 chromosome, completealanine dehydrogenase2e-21103
NC_016512:2388612:2403216240321624043281113Propionibacterium acnes TypeIA2 P.acn17 chromosome, completealanine dehydrogenase2e-21103
NC_016516:2380131:2384692238469223858041113Propionibacterium acnes TypeIA2 P.acn33 chromosome, completealanine dehydrogenase2e-21103
NC_016516:2380131:2394736239473623958481113Propionibacterium acnes TypeIA2 P.acn33 chromosome, completealanine dehydrogenase2e-21103
NC_014039:2386347:2390908239090823920291122Propionibacterium acnes SK137 chromosome, complete genomealanine dehydrogenase7e-21102
NC_014039:2386347:2400951240095124020721122Propionibacterium acnes SK137 chromosome, complete genomealanine dehydrogenase7e-21102
NC_015514:3351052:3379200337920033807621563Cellulomonas fimi ATCC 484 chromosome, complete genomeNAD(P) transhydrogenase subunit alpha8e-1478.2
NC_010170:4409683:4412947441294744145661620Bordetella petrii, complete genomeNAD(P) transhydrogenase subunit alpha1e-1171.2
NC_015144:997587:100529510052951006248954Weeksella virosa DSM 16922 chromosome, complete genomeN(5)-(carboxyethyl)ornithine synthase3e-1170.1
NC_013457:140474:1404741404741420301557Vibrio sp. Ex25 chromosome 2, complete genomeNAD(P) transhydrogenase alpha subunit5e-0962.8
NC_015222:523915:5281545281545292811128Nitrosomonas sp. AL212 chromosome, complete genomeNAD(P)(+) transhydrogenase (AB-specific)9e-0961.6
NC_016512:679688:6811456811456826921548Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeNAD(P) transhydrogenase subunit alpha4e-0859.3
NC_016511:678582:6817606817606833071548Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeNAD(P) transhydrogenase subunit alpha4e-0859.3
NC_014039:708427:7084277084277100131587Propionibacterium acnes SK137 chromosome, complete genomeNAD(P)(+) transhydrogenase (AB-specific), alpha subunit5e-0859.3
NC_014966:919442:9358269358269373821557Vibrio vulnificus MO6-24/O chromosome II, complete sequenceNAD(P) transhydrogenase subunit alpha9e-0858.2