Pre_GI Gene

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Host: NC_007347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007347:1239982 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12399821240404423Heat shock protein Hsp20QuickGO ontologyBLASTP
12404311240895465CBSQuickGO ontologyBLASTP
12409771241402426Transport-associatedQuickGO ontologyBLASTP
12414631241675213hypothetical proteinBLASTP
12416261242369744NitroreductaseQuickGO ontologyBLASTP
12423991243025627PhosphoribosyltransferaseQuickGO ontologyBLASTP
12430001243467468Rhomboid-like proteinQuickGO ontologyBLASTP
12437581244261504hypothetical proteinBLASTP
12442921244966675hypothetical proteinBLASTP
12451021245476375Zn-finger prokaryotic DksATraR C4 typeQuickGO ontologyBLASTP
12454991245771273hypothetical proteinBLASTP
12458801246149270hypothetical protein
12467611247327567hypothetical proteinBLASTP
124748912498882400Phosphoenolpyruvate synthaseQuickGO ontologyBLASTP
12502791251142864purine nucleoside phosphorylaseQuickGO ontologyBLASTP
12512221251683462UspAQuickGO ontologyBLASTP
12519571252397441UspAQuickGO ontologyBLASTP
12524001252978579hypothetical protein
12533921253706315hypothetical proteinBLASTP
125371612548311116Alanine dehydrogenase and pyridine nucleotide transhydrogenaseQuickGO ontologyBLASTP
12557841256392609putative Uncharacterized conserved proteinQuickGO ontologyBLASTP
12565791256947369putative DNA-binding protein H-NSQuickGO ontologyBLASTP
12573501257832483hypothetical protein
125866312597541092Porin Gram-negative typeQuickGO ontologyBLASTP
125985712609571101ribonuclease ZQuickGO ontologyBLASTP
12609951261201207hypothetical proteinBLASTP
12616621262228567YbhB and YbcLQuickGO ontologyBLASTP