Pre_GI: BLASTP Hits

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Query: NC_011959:972798:989065 Thermomicrobium roseum DSM 5159, complete genome

Start: 989065, End: 990006, Length: 942

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014960:1735786:178143217814321782310879Anaerolinea thermophila UNI-1, complete genomeputative prenyltransferase2e-52206
NC_012914:469117:499746499746500657912Paenibacillus sp. JDR-2, complete genomeUbiA prenyltransferase5e-47188
NC_014253:1197005:122868712286871229586900Methanohalobium evestigatum Z-7303 chromosome, complete genomeprenyltransferase UbiA5e-47188
NC_009698:2367171:237379123737912374657867Clostridium botulinum A str. Hall chromosome, complete genomephosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase3e-45182
NC_009697:2394826:240144624014462402312867Clostridium botulinum A str. ATCC 19397 chromosome, completephosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase3e-45182
NC_009495:2524000:252942325294232530289867Clostridium botulinum A str. ATCC 3502 chromosome, complete genomephosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase3e-45182
NC_012563:2680246:270393527039352704801867Clostridium botulinum A2 str. Kyoto, complete genomeprenyltransferase, UbiA family6e-45181
NC_009699:2576500:257816025781602579026867Clostridium botulinum F str. Langeland chromosome, complete genomephosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase6e-45181
NC_017297:2575306:257829925782992579165867Clostridium botulinum F str. 230613 chromosome, complete genomeprenyltransferase, UbiA family6e-45181
NC_010516:2511035:251764525176452518511867Clostridium botulinum B1 str. Okra, complete genomeprenyltransferase, UbiA family2e-44179
NC_010520:2585014:259217725921772593043867Clostridium botulinum A3 str. Loch Maree, complete genomeprenyltransferase, UbiA family2e-44179
NC_012658:2584355:258789525878952588761867Clostridium botulinum Ba4 str. 657 chromosome, complete genomephosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase3e-44179
NC_011725:4870223:487235048723504873237888Bacillus cereus B4264 chromosome, complete genomeUbiA prenyltransferase1e-41170
NC_020134:134875:136449136449137306858Clostridium stercorarium subsp. stercorarium DSM 8532, completeprenyltransferase, UbiA family2e-41169
NC_009523:2769154:276915427691542770137984Roseiflexus sp. RS-1 chromosome, complete genomeUbiA prenyltransferase6e-35148
NC_013440:5543667:556059155605915561481891Haliangium ochraceum DSM 14365, complete genomeUbiA prenyltransferase1e-34147
NC_007484:2222474:223273322327332233605873Nitrosococcus oceani ATCC 19707, complete genomeUbiA prenyltransferase4e-34145
NC_008740:1815743:184599418459941846884891Marinobacter aquaeolei VT8, complete genomeUbiA prenyltransferase2e-33143
NC_014394:3036758:306679630667963067671876Gallionella capsiferriformans ES-2 chromosome, complete genomeUbiA prenyltransferase9e-33140
NC_018868:3943088:395703439570343957897864Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomephosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase1e-30134
NC_015416:1571451:157542515754251576324900Methanosaeta concilii GP-6 chromosome, complete genomeUbiA family prenyltransferase5e-30132
NC_019757:4878417:489256248925624893548987Cylindrospermum stagnale PCC 7417, complete genome4-hydroxybenzoate polyprenyltransferase-like prenyltransferase9e-29127
NC_007517:1561466:157343115734311574291861Geobacter metallireducens GS-15, complete genomehypothetical protein1e-27123
NC_009379:304222:324082324082324966885Polynucleobacter sp. QLW-P1DMWA-1, complete genomeUbiA prenyltransferase4e-26119
NC_015563:6357653:637122663712266372119894Delftia sp. Cs1-4 chromosome, complete genomeUbiA prenyltransferase5e-26118
NC_002977:2719774:274676127467612747651891Methylococcus capsulatus str. Bath, complete genomehypothetical protein2e-25116
NC_002939:1634843:164731116473111648165855Geobacter sulfurreducens PCA, complete genomehypothetical protein5e-25115
NC_018645:2492779:249277924927792493633855Desulfobacula toluolica Tol2, complete genome4-hydroxybenzoate octaprenyltransferase UbiA5e-21102
NC_008609:2254392:227106822710682271925858Pelobacter propionicus DSM 2379, complete genomeUbiA prenyltransferase7e-1994.7
NC_010814:2074266:208509820850982085952855Geobacter lovleyi SZ, complete genomeUbiA prenyltransferase2e-1893.2
NC_008554:156744:167066167066167608543Syntrophobacter fumaroxidans MPOB, complete genomeUbiA prenyltransferase4e-1582
NC_014033:1664500:167985716798571680735879Prevotella ruminicola 23 chromosome, complete genomeprenyltransferase, UbiA family3e-1169.3
NC_015501:1200411:120211812021181203008891Porphyromonas asaccharolytica DSM 20707 chromosome, completeUbiA prenyltransferase9e-0961.2