Pre_GI: BLASTP Hits

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Query: NC_011770:4924127:4931593 Pseudomonas aeruginosa LESB58, complete genome

Start: 4931593, End: 4932705, Length: 1113

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007508:1446526:1462729146272914638351107Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeshufflon-specific recombinase3e-98358
NC_011000:183928:2032112032112043381128Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative plasmid recombinase2e-95349
NC_008800:1300500:1308992130899213101101119Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative integrase/recombinase protein4e-90331
NC_020063:3690308:3710476371047637115491074Enterobacteriaceae bacterium strain FGI 57, complete genomeIntegrase1e-88327
NC_010622:249625:2798672798672809881122Burkholderia phymatum STM815 chromosome 1, complete sequenceintegrase family protein6e-79294
NC_005773:106000:1097241097241107971074Pseudomonas syringae pv. phaseolicola 1448A, complete genomeshufflon-specific recombinase9e-76284
NC_006350:3865584:3873083387308338740841002Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative plasmid recombinase2e-74280
NC_010501:4379920:4392912439291243939341023Pseudomonas putida W619, complete genomeintegrase family protein4e-62238
NC_008781:4178115:418438241843824185365984Polaromonas naphthalenivorans CJ2, complete genomephage integrase family protein1e-61236
NC_002927:3827211:3833598383359838345991002Bordetella bronchiseptica RB50, complete genomeshufflon-specific DNA recombinase8e-61234
NC_015422:910292:9166939166939177841092Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase family protein1e-60233
NC_016616:134449:1400551400551411311077Dechlorosoma suillum PS chromosome, complete genomesite-specific recombinase XerD9e-59227
NC_008313:2685531:2688767268876726898131047Ralstonia eutropha H16 chromosome 1, complete sequencephage integrase family protein6e-58224
NC_015850:1006980:1008592100859210096021011Acidithiobacillus caldus SM-1 chromosome, complete genomeputative phage integrase3e-57222
NC_007434:1809946:1853156185315618541751020Burkholderia pseudomallei 1710b chromosome I, complete sequenceprobable site-specific8e-57221
NC_014311:1635408:1647196164719616482151020Ralstonia solanacearum PSI07 chromosome, complete genomephage integrase domain3e-56219
NC_008752:415599:431227431227432225999Acidovorax avenae subsp. citrulli AAC00-1, complete genomephage integrase family protein2e-56219
NC_010511:3106418:3119432311943231204481017Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein3e-55216
NC_004463:925140:940715940715941704990Bradyrhizobium japonicum USDA 110, complete genomeprobable site-specific integrase/recombinase4e-54212
NC_010172:4185904:4194558419455841955621005Methylobacterium extorquens PA1, complete genomeintegrase family protein6e-54211
NC_009659:543000:548709548709549695987Janthinobacterium sp. Marseille chromosome, complete genomephage integrase site specific recombinase2e-53209
NC_010084:534937:541878541878542864987Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein4e-53208
NC_012796:1600600:1605716160571616067561041Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase5e-53208
NC_012988:4633930:4641261464126146422741014Methylobacterium extorquens DM4, complete genomeintegrase2e-52206
NC_004578:568236:5847805847805860211242Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family4e-52205
NC_008060:2913671:2934382293438229354251044Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage integrase1e-51204
NC_008542:483761:4912204912204922631044Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage integrase family protein1e-51204
NC_010682:3313944:3349996334999633510511056Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein2e-51203
NC_012856:3000839:3011439301143930124941056Ralstonia pickettii 12D chromosome 1, complete genomeintegrase family protein5e-51201
NC_015942:403296:4146714146714157651095Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein7e-51201
NC_015381:429940:4389684389684400111044Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase5e-50198
NC_008782:841134:851174851174852145972Acidovorax sp. JS42, complete genomephage integrase family protein1e-49197
NC_007626:3996000:4009811400981140109021092Magnetospirillum magneticum AMB-1, complete genomeIntegrase2e-49196
NC_013722:3117442:3131487313148731325811095Xanthomonas albilineans, complete genomeputative shufflon-specific dna recombinase protein5e-49195
NC_014216:2538500:255809425580942559092999Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeintegrase family protein2e-48193
NC_015379:6226661:6232535623253562336681134Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative phage integrase4e-48192
NC_015458:2338437:2340983234098323420711089Pusillimonas sp. T7-7 chromosome, complete genomesite-specific recombinase, phage integrase family2e-45183
NC_007626:959684:9702309702309713091080Magnetospirillum magneticum AMB-1, complete genomeIntegrase2e-45183
NC_015684:362236:3848903848903859091020Oligotropha carboxidovorans OM5 chromosome, complete genomeshufflon-specific DNA recombinase3e-45182
NC_008260:2340824:2352446235244623535491104Alcanivorax borkumensis SK2, complete genomeshufflon-specific DNA recombinase4e-45182
NC_014722:771483:788089788089788976888Burkholderia rhizoxinica HKI 454, complete genomeDNA integration/recombination/inversion protein1e-44180
NC_008380:4968492:497566649756664976619954Rhizobium leguminosarum bv. viciae 3841, complete genomeputative shufflon-specific DNA recombinase9e-42171
NC_011745:3443371:3443889344388934450131125Escherichia coli ED1a chromosome, complete genomeShufflon-specific DNA recombinase1e-36154
NC_004547:611178:6162356162356173621128Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeshufflon-specific DNA recombinase2e-36153
NC_003295:1654000:1669739166973916708031065Ralstonia solanacearum GMI1000, complete genomePUTATIVE INTEGRASE/RECOMBINASE PROTEIN3e-36152
NC_012880:3529017:3548469354846935495931125Dickeya dadantii Ech703, complete genomeintegrase family protein1e-34147
NC_007651:3560652:356953635695363570204669Burkholderia thailandensis E264 chromosome I, complete sequencesite-specific recombinase, phage integrase family2e-32140
NC_014910:966761:9810169810169826051590Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein1e-26120
NC_005966:2157677:2168414216841421694361023Acinetobacter sp. ADP1, complete genomeputative integrase/recombinase protein2e-26120
NC_008314:2686851:2690066269006626911061041Ralstonia eutropha H16 chromosome 2, complete sequencephage integrase family protein2e-25117
NC_017033:2081206:210106921010692101995927Frateuria aurantia DSM 6220 chromosome, complete genomesite-specific recombinase XerD2e-24113
NC_008702:2039462:2046178204617820472541077Azoarcus sp. BH72, complete genomesite-specific recombinase, phage integrase family7e-24111
NC_009074:1470689:148737214873721487830459Burkholderia pseudomallei 668 chromosome I, complete sequencesite-specific recombinase, phage integrase family7e-24111
NC_009719:1135523:1153403115340311545451143Parvibaculum lavamentivorans DS-1 chromosome, complete genomeintegrase family protein6e-23108
NC_009074:3409849:3414673341467334163881716Burkholderia pseudomallei 668 chromosome I, complete sequenceIntegrase7e-23108
NC_014910:3727887:3734725373472537357771053Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein1e-22107
NC_014355:1223243:1233478123347812345481071Candidatus Nitrospira defluvii, complete genomeputative integrase2e-22107
NC_015675:4565500:4581355458135545824161062Mesorhizobium opportunistum WSM2075 chromosome, complete genomeintegrase family protein4e-21102
NC_008686:1383891:1388943138894313899981056Paracoccus denitrificans PD1222 chromosome 1, complete sequencephage integrase family protein2e-20100
NC_009840:396319:405988405988406953966Prochlorococcus marinus str. MIT 9215, complete genomeSite-specific recombinase XerD5e-2099
NC_010002:3509506:3515861351586135169581098Delftia acidovorans SPH-1, complete genomeintegrase family protein7e-2098.6
NC_010125:2295500:2307999230799923091591161Gluconacetobacter diazotrophicus PAl 5, complete genomeputative phage integrase6e-1995.1
NC_011365:502620:5162375162375174331197Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeintegrase family protein7e-1995.1
NC_014355:288000:2962442962442972841041Candidatus Nitrospira defluvii, complete genomeputative phage integrase8e-1995.1
NC_008358:263458:2825832825832836441062Hyphomonas neptunium ATCC 15444, complete genomesite-specific recombinase, phage integrase family3e-1893.2
NC_012724:3100430:3117025311702531181251101Burkholderia glumae BGR1 chromosome 1, complete genomePhage integrase3e-1893.2
NC_008816:369074:379721379721380686966Prochlorococcus marinus str. AS9601, complete genomehypothetical protein5e-1892.4
NC_007508:2072738:2083402208340220848591458Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative integrase/recombinase1e-1790.9
NC_014355:243543:2579012579012590221122Candidatus Nitrospira defluvii, complete genomephage integrase1e-1790.9
NC_010511:6485500:649108764910876491626540Methylobacterium sp. 4-46 chromosome, complete genome3e-1789.7
NC_015381:1173603:1180904118090411820971194Burkholderia gladioli BSR3 chromosome 1, complete sequenceGTP-binding protein LepA4e-1789.4
NC_011757:5693584:5696052569605256971161065Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein6e-1789
NC_007086:2887875:2899536289953629009451410Xanthomonas campestris pv. campestris str. 8004, complete genomeintegrase/recombinase1e-1687.8
NC_008789:350650:3635873635873647261140Halorhodospira halophila SL1, complete genomephage integrase family protein2e-1687
NC_015259:485015:5473145473145485251212Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIntegrase family protein7e-1685.1
NC_007759:2179000:2183062218306221841561095Syntrophus aciditrophicus SB, complete genomephage integrase family protein2e-1583.6
NC_015259:673662:7011397011397022691131Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIntegrase family protein6e-1582
NC_015731:2148517:2150716215071621518041089Nitrosomonas sp. Is79A3 chromosome, complete genomeintegrase family protein1e-1480.9
NC_015733:1943385:1947826194782619489471122Pseudomonas putida S16 chromosome, complete genomechorismate mutase family protein2e-1480.1
NC_015381:3457784:3491685349168534928421158Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase5e-1479
NC_007651:3719191:373395337339533734393441Burkholderia thailandensis E264 chromosome I, complete sequencesite-specific recombinase, phage integrase family1e-1377.4
NC_013854:2148215:215822121582212159126906Azospirillum sp. B510, complete genomeintegrase3e-1376.6
NC_015422:3581848:3595358359535835966021245Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase family protein4e-1375.9
NC_009800:289000:2918312918312929911161Escherichia coli HS, complete genomesite-specific recombinase, phage integrase family8e-1375.1
NC_017328:303987:3104213104213115811161Shigella flexneri 2002017 chromosome, complete genomephage integrase family site-specific recombinase8e-1375.1
NC_008258:269806:2774612774612786211161Shigella flexneri 5 str. 8401, complete genomeputative integrase8e-1375.1
NC_011663:2123388:213140621314062132242837Shewanella baltica OS223 chromosome, complete genomeintegrase family protein1e-1274.7
NC_014539:1839840:185413818541381854917780Burkholderia sp. CCGE1003 chromosome 1, complete sequencehypothetical protein1e-1274.3
NC_007651:3560652:356780435678043568247444Burkholderia thailandensis E264 chromosome I, complete sequenceintegrase, putative7e-1272
NC_010814:1441327:1473385147338514746501266Geobacter lovleyi SZ, complete genomeintegrase family protein1e-1170.9
NC_017325:1488841:1500241150024115013261086Sinorhizobium meliloti SM11 chromosome, complete genomephage integrase family protein1e-1170.9
NC_018679:3843870:3849053384905338501291077Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completephage integrase family protein site-specific recombinase2e-1170.1
NC_015064:2341152:2360406236040623614641059Acidobacterium sp. MP5ACTX9 chromosome, complete genomeintegrase family protein6e-1168.9
NC_008609:3921113:3938275393827539394831209Pelobacter propionicus DSM 2379, complete genomephage integrase family protein6e-1168.9
NC_002927:506183:530239530239530604366Bordetella bronchiseptica RB50, complete genomeputative integrase1e-1068.2
NC_014972:1126426:1145414114541411465951182Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein1e-1067.8
NC_012796:2757500:2757717275771727589461230Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase3e-1066.6
NC_011283:4212000:4229167422916742303301164Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase5e-1065.9
NC_016845:1285435:1288374128837412895371164Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,site-specific recombinase, phage integrase family5e-1065.5
NC_007575:1694877:1714292171429217153981107Sulfurimonas denitrificans DSM 1251, complete genomePhage integrase7e-1065.5
NC_016631:2112175:2121248212124821223961149Granulicella mallensis MP5ACTX8 chromosome, complete genomeintegrase family protein7e-1065.5
NC_016026:2082500:2095118209511820962931176Micavibrio aeruginosavorus ARL-13 chromosome, complete genomephage integrase family protein1e-0964.7
NC_016809:389561:4020064020064030491044Haemophilus influenzae 10810, complete genomeDLP12 prophage integrase1e-0964.3
NC_020418:2084937:2084937208493720860881152Morganella morganii subsp. morganii KT, complete genomePhage integrase2e-0963.5
NC_020418:3133831:3146831314683131479941164Morganella morganii subsp. morganii KT, complete genomeintegrase3e-0963.2
NC_004459:2443000:2501649250164925028571209Vibrio vulnificus CMCP6 chromosome I, complete sequenceIntegrase4e-0962.8
NC_006350:3957454:396679739667973967651855Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative bacteriophage integrase7e-0962
NC_008825:564392:5822395822395832431005Methylibium petroleiphilum PM1, complete genomehypothetical protein1e-0860.8
NC_012214:2805297:282140528214052822034630Erwinia pyrifoliae Ep1/96, complete genomephage integrase family, fragment2e-0860.8
NC_005139:1784000:1822239182223918234471209Vibrio vulnificus YJ016 chromosome I, complete sequenceintegrase2e-0860.8
NC_009256:2945059:2952802295280229542111410Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage integrase family protein2e-0860.5
NC_016631:4113794:4148964414896441500041041Granulicella mallensis MP5ACTX8 chromosome, complete genomeintegrase family protein6e-0858.9
NC_018678:87064:9596595965970681104Alteromonas macleodii str. 'English Channel 673' chromosome,integrase3e-0756.6
NC_007298:1129889:1137870113787011388861017Dechloromonas aromatica RCB, complete genomePhage integrase4e-0756.2
NC_011989:594353:6107606107606117911032Agrobacterium vitis S4 chromosome 1, complete sequenceIntegrase4e-0756.2
NC_012587:1203103:1216780121678012180691290Rhizobium sp. NGR234, complete genomeDNA integration/recombination/invertion protein6e-0755.5
NC_013282:1200993:1204148120414812053111164Cronobacter turicensis, complete genomeProphage DLP12 integrase8e-0755.1
NC_014323:3292082:330634733063473306697351Herbaspirillum seropedicae SmR1 chromosome, complete genome9e-0754.7
NC_003295:1587313:159828515982851598986702Ralstonia solanacearum GMI1000, complete genomePUTATIVE INTEGRASE-LIKE PROTEIN1e-0654.7
NC_015681:1558873:1561014156101415622041191Thermodesulfatator indicus DSM 15286 chromosome, complete genomeintegrase family protein1e-0654.7
NC_012917:3565268:3573374357337435744321059Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein1e-0654.3
NC_002947:2589951:262499526249952625819825Pseudomonas putida KT2440, complete genomeintegrative genetic element Ppu40, integrase2e-0653.9
NC_009943:748788:7553137553137565061194Candidatus Desulfococcus oleovorans Hxd3, complete genomeintegrase family protein3e-0653.5
NC_011883:519308:5298875298875308991013Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,hypothetical protein3e-0653.1
NC_014733:1573171:1573171157317115741871017Methylovorus sp. MP688 chromosome, complete genomeintegrase family protein4e-0652.8
NC_011894:79282:884998849988762264Methylobacterium nodulans ORS 2060, complete genome4e-0652.8
NC_014825:137485:1393521393521404311080Ruminococcus albus 7 plasmid pRUMAL02, complete sequenceintegrase family protein6e-0652.4
NC_015312:1191633:1191633119163311929731341Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeintegrase family protein9e-0651.6