Pre_GI Gene

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Host: NC_011883 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011883:519308 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,

Host Lineage: Desulfovibrio desulfuricans; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 was isolated from the rumen of a sheep. D. desulfuricans reduces sulfate to sulfide found in soil, freshwater, saltwater and the intestinal tract of animals. This organism grows anaerobically and utilizes a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite, as well as others. The nitrate reduction pathway is not expressed while sulfate is available. Alternatively, the sulfate reduction pathway is constitutively expressed when the cells are growing with nitrate reduction. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making this organism of interest as bioremediator. Metal corrosion, a problem that is partly the result of the collective activity of this bacterium, results in billions of dollars in losses each year to the petroleum industry. This organism is responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5182985193111014hypothetical proteinBLASTP
5193085203931086Methyltransferase type 12QuickGO ontologyBLASTP
5203965224592064TonB-dependent receptorQuickGO ontologyBLASTP
522675523613939transcriptional regulator AraC familyQuickGO ontologyBLASTP
523664523930267transposase IS3IS911 family proteinQuickGO ontologyBLASTP
523987524775789Integrase catalytic regionQuickGO ontologyBLASTP
525082525729648transcriptional regulator XRE familyQuickGO ontologyBLASTP
5256155275101896plasmid recombination proteinQuickGO ontologyBLASTP
527776528615840Cobyrinic acid ac-diamide synthaseQuickGO ontologyBLASTP
528605529138534hypothetical protein
529135529830696hypothetical protein
5298875308991013hypothetical proteinBLASTP
53102053111394tRNA-SerQuickGO ontology
531322532140819Tetratricopeptide domain proteinQuickGO ontologyBLASTP
532134532874741cytidyltransferase-related domain proteinQuickGO ontologyBLASTP
5328745341451272gamma-glutamyl phosphate reductaseQuickGO ontologyBLASTP
534330535097768hypothetical protein
5352265370821857indolepyruvate ferredoxin oxidoreductase alpha subunitQuickGO ontologyBLASTP
537093537701609Indolepyruvate ferredoxin oxidoreductaseQuickGO ontologyBLASTP
5378525390121161radical SAM enzyme Cfr familyQuickGO ontologyBLASTP
5393905407211332metal dependent phosphohydrolaseQuickGO ontologyBLASTP
5411505423191170Polysulphide reductase NrfDQuickGO ontologyBLASTP
5423325431147834Fe-4S ferredoxin iron-sulfur binding domain proteinQuickGO ontologyBLASTP
543114543494381cytochrome c family proteinQuickGO ontologyBLASTP