Pre_GI: BLASTP Hits

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Query: NC_011770:1431740:1452111 Pseudomonas aeruginosa LESB58, complete genome

Start: 1452111, End: 1452728, Length: 618

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:860944:881683881683882300618Pseudomonas aeruginosa LESB58, complete genomePredicted chitinase; lytic protein9e-89325
NC_012912:325913:332536332536333162627Dickeya zeae Ech1591, complete genomeglycoside hydrolase family 195e-34144
NC_013592:4295449:431316143131614313787627Dickeya dadantii Ech586, complete genomeglycoside hydrolase family 191e-33142
NC_011094:638552:664550664550665164615Salmonella enterica subsp. enterica serovar Schwarzengrund strlytic enzyme2e-32139
NC_015761:1017301:102522610252261025840615Salmonella bongori NCTC 12419, complete genomebacteriophage protein1e-31136
NC_017047:1906000:191830019183001918926627Rahnella aquatilis HX2 chromosome, complete genomeputative endolysin3e-31134
NC_012214:1974500:198840819884081989031624Erwinia pyrifoliae Ep1/96, complete genomeLytic enzyme5e-29127
NC_013282:1200993:122515912251591225785627Cronobacter turicensis, complete genomeUncharacterized protein HI14152e-28125
NC_015663:4522109:452715045271504527779630Enterobacter aerogenes KCTC 2190 chromosome, complete genomelytic enzyme4e-28124
NC_011601:2806392:281283928128392813465627Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeendolysin2e-27122
NC_012731:2083650:211163421116342112260627Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative glycoside hydrolase3e-27121
NC_020181:5384015:539721353972135397842630Enterobacter aerogenes EA1509E, complete genomePhage endolysin2e-26118
NC_020181:5217000:522775752277575228383627Enterobacter aerogenes EA1509E, complete genomehypothetical protein4e-26117
NC_017243:58000:613536135361964612Brachyspira intermedia PWS/A chromosome, complete genomeglycoside hydrolase9e-26116
NC_009648:1541699:156536715653671565993627Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative glycoside hydrolase1e-25116
NC_013850:2182337:220954522095452210171627Klebsiella variicola At-22 chromosome, complete genomeglycoside hydrolase family 191e-25116
NC_014121:1682638:169633316963331696881549Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completelytic enzyme1e-25116
NC_016612:3314846:333598533359853336533549Klebsiella oxytoca KCTC 1686 chromosome, complete genomelytic enzyme5e-25114
NC_004578:3817330:383103838310383831583546Pseudomonas syringae pv. tomato str. DC3000, complete genomelysozyme, putative1e-24113
NC_018604:305957:314155314155314781627Brachyspira pilosicoli WesB complete genomeglycoside hydrolase family 192e-23109
NC_013282:1804909:182501118250111825565555Cronobacter turicensis, complete genomehypothetical protein2e-23109
NC_003902:3514000:353599035359903536631642Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related lytic enzyme3e-23108
NC_005773:2177184:218310721831072183652546Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative chitinase7e-23107
NC_018604:2871328:288056228805622881140579Brachyspira pilosicoli WesB complete genomeendolysin glycoside hydrolase8e-23107
NC_018607:2010500:201515420151542015747594Brachyspira pilosicoli B2904 chromosome, complete genomeglycoside hydrolase1e-22106
NC_018607:2747462:275671727567172757295579Brachyspira pilosicoli B2904 chromosome, complete genomeendolysin glycoside hydrolase3e-22105
NC_019908:1886647:189339118933911893969579Brachyspira pilosicoli P43/6/78 chromosome, complete genomeendolysin glycoside hydrolase2e-22105
NC_019908:807000:812628812628813203576Brachyspira pilosicoli P43/6/78 chromosome, complete genomeglycoside hydrolase family protein2e-22105
NC_004578:4432983:444604244460424446575534Pseudomonas syringae pv. tomato str. DC3000, complete genomelysozyme, putative4e-22104
NC_014330:1324500:133383613338361334414579Brachyspira pilosicoli 95/1000 chromosome, complete genomeendolysin glycoside hydrolase4e-22104
NC_010002:3785313:378740737874073787958552Delftia acidovorans SPH-1, complete genomeputative lysozyme9e-22103
NC_017986:4124335:412990241299024130471570Pseudomonas putida ND6 chromosome, complete genomeglycoside hydrolase family protein1e-21103
NC_012660:4558122:457641545764154576948534Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage encoded lysozyme1e-21102
NC_017243:1734179:174576917457691746251483Brachyspira intermedia PWS/A chromosome, complete genomeendolysin glycoside hydrolase4e-21101
NC_016830:4999946:501578150157815016344564Pseudomonas fluorescens F113 chromosome, complete genomepyocin lytic enzyme4e-21101
NC_014150:1607873:162002416200241620638615Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 194e-21101
NC_004129:2234851:224007122400712240622552Pseudomonas fluorescens Pf-5, complete genomepyocin R2_PP, lytic enzyme3e-21101
NC_020054:4983691:498793949879394988610672Fibrella aestuarina BUZ 2 drat genomeputative chitinase3e-21101
NC_005773:2177184:219379921937992194344546Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative chitinase1e-2099.4
NC_015733:1976752:198241519824151982966552Pseudomonas putida S16 chromosome, complete genomepyocin R2_PP, lytic enzyme2e-2099
NC_014150:2560475:256367625636762564269594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 192e-2099
NC_016002:2037374:205644220564422056984543Pseudogulbenkiania sp. NH8B, complete genomeglycoside hydrolase family protein2e-1995.9
NC_014150:1936154:193923519392351939828594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 193e-1995.1
NC_014150:1497381:150134615013461501939594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 193e-1995.1
NC_017025:1761918:176969117696911770404714Flavobacterium indicum GPTSA100-9, complete genomeGlycoside hydrolase family 19, putative chitinase5e-1994.4
NC_003047:3419212:3435808343580834377271920Sinorhizobium meliloti 1021, complete genomePUTATIVE PROTEASE TRANSMEMBRANE PROTEIN3e-1788.6
NC_011071:2733438:2736843273684327378501008Stenotrophomonas maltophilia R551-3, complete genomechitinase-like protein1e-1582.8
NC_010943:3034366:3037592303759230385961005Stenotrophomonas maltophilia K279a, complete genomeputative bacteriophage protein4e-1581.3
NC_015947:2752450:2755845275584527568521008Burkholderia sp. JV3 chromosome, complete genomeglycoside hydrolase family protein3e-1478.2
NC_009255:1369200:138805713880571388635579Burkholderia vietnamiensis G4 chromosome 2, complete sequenceglycoside hydrolase family protein4e-1478.2
NC_014330:1593000:159658415965841597099516Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative Lys-endolysin; glycoside hydrolase1e-1376.3
NC_014500:4691915:4699276469927647015822307Dickeya dadantii 3937 chromosome, complete genomeEF hand domain-containing protein2e-1375.9
NC_016641:1148220:1156074115607411570781005Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein4e-1168.2
NC_009937:958576:961972961972962877906Azorhizobium caulinodans ORS 571, complete genomeputative chitinase5e-1167.8
NC_014973:5099543:5124478512447851254881011Geobacter sp. M18 chromosome, complete genomeglycoside hydrolase family 198e-1167
NC_017325:1488841:148964314896431490611969Sinorhizobium meliloti SM11 chromosome, complete genomechitinase-like protein1e-1066.6
NC_017325:1897500:189797818979781898946969Sinorhizobium meliloti SM11 chromosome, complete genomechitinase-like protein1e-1066.6
NC_016047:345491:355177355177355635459Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeendopeptidase LytF2e-1065.9
NC_020301:853267:865370865370865978609Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomehypothetical protein2e-1065.9
NC_014168:1724993:1731346173134617328481503Segniliparus rotundus DSM 44985 chromosome, complete genomefamily 19 glycoside hydrolase5e-1064.3
NC_010067:2304313:232964023296402329939300Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-1063.9
NC_010161:1324381:133379013337901334371582Bartonella tribocorum CIP 105476, complete genomepeptidoglycan binding protein7e-1063.9
NC_010161:1501758:151116715111671511748582Bartonella tribocorum CIP 105476, complete genomehypothetical protein7e-1063.9
NC_010161:1949637:195948819594881960069582Bartonella tribocorum CIP 105476, complete genomehypothetical protein2e-0962.8
NC_010161:2548254:255766425576642558245582Bartonella tribocorum CIP 105476, complete genomehypothetical protein2e-0962.8
NC_010397:1802724:1809368180936818107411374Mycobacterium abscessus chromosome Chromosome, complete sequenceBacteriophage protein8e-0960.5
NC_018748:1443176:1454863145486314560471185Emticicia oligotrophica DSM 17448 chromosome, complete genomehypothetical protein1e-0860.1
NC_010552:592154:6011786011786038052628Burkholderia ambifaria MC40-6 chromosome 2, complete sequencechitinase-like protein2e-0858.9
NC_011205:1391971:140140014014001401687288Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853lytic enzyme8e-0857
NC_011094:1923870:194398219439821944269288Salmonella enterica subsp. enterica serovar Schwarzengrund strlytic enzyme8e-0857
NC_014118:1171411:1179632117963211821632532Burkholderia sp. CCGE1002 chromosome chromosome 2, completechitinase-like protein1e-0756.6
NC_016835:1:1327313273157052433Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,putative chitinase9e-0753.5