Pre_GI: BLASTP Hits

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Query: NC_011094:1683979:1692014 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1692014, End: 1693240, Length: 1227

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:1429523:1484636148463614858621227Salmonella enterica subsp. enterica serovar Agona str. SL483,secreted effector protein0826
NC_003197:1713259:1721293172129317225191227Salmonella typhimurium LT2, complete genomesecreted effector protein0821
NC_006905:1726416:1734452173445217356781227Salmonella enterica subsp. enterica serovar Choleraesuis strtranslocated effector: regulated by SPI-20821
NC_012125:2143246:2155962215596221571881227Salmonella enterica subsp. enterica serovar Paratyphi C straineffector protein0821
NC_016810:1670112:1678146167814616793721227Salmonella enterica subsp. enterica serovar Typhimurium strtranslocated effector protein (SseJ)0821
NC_016856:1723236:1731270173127017324961227Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecreted effector protein0821
NC_016857:1670112:1678146167814616793721227Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secreted effector protein0821
NC_016860:1710950:1718984171898417202101227Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein0821
NC_016863:1671428:1679462167946216806881227Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein0821
NC_017046:1669995:1678029167802916792551227Salmonella enterica subsp. enterica serovar Typhimurium str. 798translocated effector protein (SseJ)0821
NC_011080:1709612:1717646171764617188721227Salmonella enterica subsp. enterica serovar Newport str. SL254,secreted effector protein0820
NC_011205:1633353:1646088164608816473141227Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secreted effector protein0819
NC_011294:1493849:1506566150656615077921227Salmonella enterica subsp. enterica serovar Enteritidis strtranslocated effector protein SseJ0819
NC_010102:1388344:1401046140104614022721227Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0818
NC_011083:1761352:1769395176939517706211227Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secreted effector protein0818
NC_016831:1468691:1476725147672514779511227Salmonella enterica subsp. enterica serovar Gallinarum/pullorumtranslocated effector protein (SseJ)0818
NC_011274:1544653:1557372155737215585981227Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91translocated effector protein SseJ0818
NC_010067:1300606:1307720130772013090001281Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0687
NC_009052:144619:1510771510771522191143Shewanella baltica OS155, complete genomelipolytic enzyme, G-D-S-L family2e-48193
NC_004631:1587000:158985615898561589996141Salmonella enterica subsp. enterica serovar Typhi Ty2, complete5e-21102
NC_003198:1378457:139118513911851391325141Salmonella enterica subsp. enterica serovar Typhi str. CT18,secreted effector J (pseudogene)5e-21102
NC_019757:5748432:5748432574843257494691038Cylindrospermum stagnale PCC 7417, complete genomePEP-CTERM putative exosortase interaction domain-containing protein1e-1584.3
NC_010628:7128951:7128951712895171300301080Nostoc punctiforme PCC 73102, complete genomelipolytic enzyme, G-D-S-L family7e-1582
NC_015696:1853979:1871766187176618731541389Francisella sp. TX077308 chromosome, complete genomeSecreted effector J SseJ2e-1377.4
NC_014966:328056:3305213305213317741254Vibrio vulnificus MO6-24/O chromosome II, complete sequencethermolabile hemolysin6e-1375.9
NC_004460:1618892:1618892161889216201451254Vibrio vulnificus CMCP6 chromosome II, complete sequencePhospholipase/lecithinase/hemolysin6e-1375.5
NC_005140:340000:3428933428933441461254Vibrio vulnificus YJ016 chromosome II, complete sequencephospholipase/hemolysin6e-1375.5
NC_012779:1286500:1318047131804713201612115Edwardsiella ictaluri 93-146, complete genomeSspH12e-1273.6
NC_008344:554229:5566195566195576261008Nitrosomonas eutropha C91, complete genomelipolytic enzyme, G-D-S-L family protein7e-1272
NC_011294:2334979:2334979233497923373452367Salmonella enterica subsp. enterica serovar Enteritidis strsecreted effector protein1e-1068.2
NC_011205:2462025:2462025246202524643912367Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-1068.2
NC_003198:2297837:2297837229783723002032367Salmonella enterica subsp. enterica serovar Typhi str. CT18,secreted effector protein2e-1067.8
NC_004631:685357:7045107045107068762367Salmonella enterica subsp. enterica serovar Typhi Ty2, completesecreted effector protein2e-1067.8
NC_003197:2327474:2340885234088523432512367Salmonella typhimurium LT2, complete genomeleucine-rich repeat protein2e-1067.8
NC_011083:2375061:2388465238846523908312367Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,leucine-rich repeat protein2e-1067.8
NC_010102:683444:7025587025587049242367Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1067.8
NC_016810:2325190:2338601233860123409672367Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein2e-1067.8
NC_016832:687000:7044647044647068302367Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,E3 ubiquitin-protein ligase sspH22e-1067.8
NC_016856:2379027:2392438239243823948042367Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-1067.8
NC_011080:2342672:2342672234267223450382367Salmonella enterica subsp. enterica serovar Newport str. SL254,leucine-rich repeat protein1e-1067.8
NC_017046:2324554:2337965233796523403312367Salmonella enterica subsp. enterica serovar Typhimurium str. 798secreted effector protein2e-1067.8
NC_016863:2324293:2340630234063023429962367Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-1067.8
NC_016860:2323017:2336428233642823387942367Salmonella enterica subsp. enterica serovar Typhimurium strleucine-rich repeat protein2e-1067.8
NC_016857:2325190:2338601233860123409672367Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-1067.8
NC_011294:1006630:101781610178161018784969Salmonella enterica subsp. enterica serovar Enteritidis strtype III secreted protein3e-1067
NC_011205:1107998:111844311184431119411969Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secreted effector protein3e-1067
NC_012125:1517925:1537079153707915392652187Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-1065.5
NC_012779:1286500:1320729132072913231072379Edwardsiella ictaluri 93-146, complete genomeleucine-rich repeat protein2e-0963.9