Pre_GI: BLASTP Hits

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Query: NC_011004:4073916:4100163 Rhodopseudomonas palustris TIE-1, complete genome

Start: 4100163, End: 4100795, Length: 633

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015572:2186394:220779522077952208418624Methylomonas methanica MC09 chromosome, complete genomeintegrase family protein1e-69262
NC_014539:743523:750816750816751442627Burkholderia sp. CCGE1003 chromosome 1, complete sequenceintegrase family protein6e-67253
NC_010511:871905:881963881963882592630Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein3e-66251
NC_010170:4739925:475923847592384759852615Bordetella petrii, complete genomehypothetical protein7e-66249
NC_009434:3611738:368162936816293682249621Pseudomonas stutzeri A1501, complete genomephage integrase family site specific recombinase8e-66249
NC_014394:1626699:163772816377281638342615Gallionella capsiferriformans ES-2 chromosome, complete genomeintegrase family protein1e-65249
NC_015942:355944:362190362190362819630Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein1e-65249
NC_020209:47504:858688586886488621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC2e-65248
NC_020209:47504:604376043761057621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC2e-65248
NC_011757:3540992:354603435460343546663630Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein6e-65246
NC_007336:66000:825458254583171627Ralstonia eutropha JMP134 megaplasmid, complete sequencePhage integrase1e-64246
NC_012988:769981:823391823391824020630Methylobacterium extorquens DM4, complete genomeDNA integration/recombination/inversion protein, site-specific recombinase, phage integrase family2e-64245
NC_010172:798923:848604848604849233630Methylobacterium extorquens PA1, complete genomeintegrase family protein2e-64245
NC_014153:2077647:208438620843862085012627Thiomonas intermedia K12 chromosome, complete genomeintegrase family protein2e-64245
NC_013446:2164974:218941721894172190040624Comamonas testosteroni CNB-2, complete genomephage integrase4e-64244
NC_012792:962292:971437971437972060624Variovorax paradoxus S110 chromosome 2, complete genomeintegrase family protein4e-64244
NC_020829:940692:982480982480983100621Pseudomonas denitrificans ATCC 13867, complete genomesite-specific recombinase XerC2e-64244
NC_015563:4093650:410572541057254106348624Delftia sp. Cs1-4 chromosome, complete genomeintegrase family protein8e-64243
NC_011757:5048714:507994450799445080573630Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein1e-63242
NC_017075:1970168:197925419792541979877624Rubrivivax gelatinosus IL144, complete genomephage integrase family protein4e-63241
NC_014910:2779573:278745227874522788075624Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein1e-62239
NC_009952:2752500:275627227562722756904633Dinoroseobacter shibae DFL 12, complete genomehypothetical protein2e-62238
NC_008702:2520500:252684025268402527454615Azoarcus sp. BH72, complete genomeputative Tyrosine recombinase xerD4e-62237
NC_008740:3520500:355204135520413552655615Marinobacter aquaeolei VT8, complete genomephage integrase family protein4e-62237
NC_017506:4380196:440114444011444401758615Marinobacter adhaerens HP15 chromosome, complete genomephage integrase family protein8e-62236
NC_016002:2946702:296022929602292960843615Pseudogulbenkiania sp. NH8B, complete genomephage integrase family protein1e-61236
NC_009778:1222273:123099312309931231595603Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-60231
NC_008043:86470:913399133991971633Silicibacter sp. TM1040 mega plasmid, complete sequencephage integrase5e-60230
NC_016816:4129299:415125441512544151856603Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family7e-59226
NC_013956:1762171:179168017916801792282603Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-58225
NC_010510:339879:339879339879340511633Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein4e-58224
NC_009438:236424:236424236424237026603Shewanella putrefaciens CN-32 chromosome, complete genomephage integrase family protein3e-58224
NC_010510:339879:352204352204352836633Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein2e-57222
NC_017047:2042346:206242220624222063024603Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein5e-56217
NC_011751:3048490:307718430771843077864681Escherichia coli UMN026 chromosome, complete genomesite-specific recombinase, phage integrase family1e-55215
NC_009512:2238437:224339322433932244109717Pseudomonas putida F1, complete genomephage integrase family protein8e-55213
NC_007722:851129:863700863700864338639Erythrobacter litoralis HTCC2594, complete genomephage integrase family protein3e-54211
NC_009092:261778:270161270161270757597Shewanella loihica PV-4, complete genomephage integrase family protein7e-48190
NC_014012:3812754:382801038280103828606597Shewanella violacea DSS12, complete genomesite-specific recombinase, phage integrase family1e-46186
NC_008314:477722:499873499873500256384Ralstonia eutropha H16 chromosome 2, complete sequencefragmented site-specific recombinase XerC/XerD9e-39159
NC_017047:2957957:296663329666332967157525Rahnella aquatilis HX2 chromosome, complete genomeintegrase1e-38159
NC_016626:1699500:172012117201211720462342Burkholderia sp. YI23 plasmid byi_1p, complete sequenceintegrase family protein3e-37154
NC_017075:1869326:189689218968921897272381Rubrivivax gelatinosus IL144, complete genomephage integrase family protein3e-34144
NC_007404:387827:395122395122395433312Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein3e-25114
NC_014258:42262:537175371754085369Pantoea vagans C9-1 plasmid pPag3, complete sequencehypothetical protein6e-24110
NC_008314:477722:505403505403505858456Ralstonia eutropha H16 chromosome 2, complete sequencetruncated site-specific recombinase1e-22106
NC_020260:2725201:273642827364282736793366Cronobacter sakazakii Sp291, complete genomehypothetical protein7e-22103
NC_010511:871905:876911876911877126216Methylobacterium sp. 4-46 chromosome, complete genome1e-20100
NC_004460:708416:725319725319725558240Vibrio vulnificus CMCP6 chromosome II, complete sequenceIntegrase2e-2099.4
NC_014500:894136:904367904367904684318Dickeya dadantii 3937 chromosome, complete genomeputative recombinase2e-1582.4
NC_012796:4075583:416552141655214166078558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase9e-1580.1
NC_012796:3600630:364833536483353648892558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-1479.3
NC_012796:77071:953999539995956558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase3e-1478.6
NC_012796:3600630:362703436270343627591558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase4e-1478.2
NC_010625:1602191:162214016221401622406267Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein1e-1376.6
NC_012796:1049034:106572110657211066278558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-1376.3
NC_012796:3600630:361445136144513615008558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-1375.9
NC_010511:4696868:474309747430974743288192Methylobacterium sp. 4-46 chromosome, complete genome2e-1375.5
NC_008314:477722:505224505224505406183Ralstonia eutropha H16 chromosome 2, complete sequenceTruncated3e-1375.1
NC_012796:3374911:342491734249173425474558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase7e-1373.9
NC_012796:1049034:109984510998451100402558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase7e-1373.9
NC_012796:985000:998898998898999455558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-1272.4
NC_020409:1173796:118265711826571183256600Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegrase family protein2e-1272.4
NC_012796:1645856:166448516644851665042558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase4e-1271.2
NC_012796:1049034:113043711304371130994558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase5e-1271.2
NC_012796:77071:114358114358114915558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase6e-1270.9
NC_020207:1614000:162429216242921624864573Enterococcus faecium NRRL B-2354, complete genomesite-specific recombinase1e-1169.7
NC_014844:511552:517143517143517697555Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeintegrase family protein1e-1169.7
NC_011883:2680380:270035627003562700949594Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,integrase family protein3e-1168.6
NC_011883:2680380:269246126924612693054594Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,integrase family protein3e-1168.6
NC_016803:3502749:352127235212723521871600Desulfovibrio desulfuricans ND132 chromosome, complete genomeintegrase family protein3e-1168.2
NC_013766:679906:692805692805693347543Listeria monocytogenes 08-5578 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase, phage integrase family4e-1168.2
NC_014916:22644:437804378044349570Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequenceintegrase family protein8e-1167
NC_020272:1311932:133478513347851335327543Bacillus amyloliquefaciens IT-45, complete genomesite-specific tyrosine recombinase1e-1066.6
UCMB5137:1522159:153732315373231537868546Bacillus atrophaeus UCMB-5137putative bacteriophage integrase2e-1065.5
NC_011295:33500:368853688537751867Coprothermobacter proteolyticus DSM 5265, complete genometyrosine recombinase XerD3e-0962
NC_014721:2135500:215045321504532151325873Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein4e-0961.2
UCMB5137:1522159:153330715333071533849543Bacillus atrophaeus UCMB-5137site-specific recombinase, phage integrase family protein5e-0961.2
NC_007907:960104:101699610169961017559564Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-0961.2
NC_003485:296140:308140308140308715576Streptococcus pyogenes MGAS8232, complete genomehypothetical protein5e-0961.2
NC_014650:603500:628630628630629172543Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase5e-0961.2
NC_004606:1107500:113322111332211133796576Streptococcus pyogenes SSI-1, complete genomeputative integrase/recombinase, XerC/XerD family5e-0960.8
NC_004070:747146:762960762960763535576Streptococcus pyogenes MGAS315, complete genomeputative recombinase - phage associated5e-0960.8
NC_008261:1787345:180851718085171809065549Clostridium perfringens ATCC 13124, complete genomesite-specific recombinase, phage integrase family1e-0860.1
NC_012926:1496510:150370315037031504245543Streptococcus suis BM407 chromosome, complete genomephage integrase family protein1e-0859.7
NC_012924:1446190:145338314533831453925543Streptococcus suis SC84, complete genomephage integrase family protein1e-0859.7
NC_012925:1357783:136497613649761365518543Streptococcus suis P1/7, complete genomephage integrase family protein1e-0859.7
NC_009443:1445936:145312714531271453699573Streptococcus suis 98HAH33, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein1e-0859.7
NC_009442:1446508:145370114537011454273573Streptococcus suis 05ZYH33 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein1e-0859.7
NC_008497:1111891:111574411157441116331588Lactobacillus brevis ATCC 367, complete genomeIntegrase2e-0859.3
NC_015520:2612767:261303226130322613904873Mahella australiensis 50-1 BON chromosome, complete genomeintegrase family protein3e-0858.9
NC_006512:696000:703511703511704071561Idiomarina loihiensis L2TR, complete genomeIntegrase/recombinase, XerC/XerD family3e-0858.5
NC_013456:212150:227153227153227713561Vibrio sp. Ex25 chromosome 1, complete genomesite-specific recombinase phage integrase family6e-0857.4
NC_009901:1516340:152799315279931528553561Shewanella pealeana ATCC 700345, complete genomeintegrase family protein1e-0756.6
NC_018678:2382708:239659923965992397159561Alteromonas macleodii str. 'English Channel 673' chromosome,integrase family protein2e-0756.2
NC_021184:3533500:354809635480963548656561Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD1e-0756.2
NC_014376:3009403:3032351303235130335741224Clostridium saccharolyticum WM1 chromosome, complete genomeintegrase family protein1e-0756.2
NC_014011:1139818:115296411529641153572609Aminobacterium colombiense DSM 12261 chromosome, complete genomeintegrase family protein3e-0755.1
NC_004116:1827351:185300518530051853547543Streptococcus agalactiae 2603V/R, complete genomeprophage LambdaSa2, site-specific recombinase, phage integrase family4e-0755.1
NC_016631:3917253:3940194394019439414861293Granulicella mallensis MP5ACTX8 chromosome, complete genomeintegrase family protein4e-0754.7
NC_010371:57683:7555775557766361080Finegoldia magna ATCC 29328 plasmid pFMC, complete sequenceputative integrase5e-0754.7
NC_013508:1491945:150146015014601501594135Edwardsiella tarda EIB202, complete genomehypothetical protein5e-0754.3
NC_016894:3988180:399539039953903996004615Acetobacterium woodii DSM 1030 chromosome, complete genomeprophage LambdaBa04 site-specific recombinase phage integrase family7e-0753.9
NC_021184:4456904:446146844614684462346879Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD7e-0753.9
NC_016052:2335648:234426723442672344818552Tetragenococcus halophilus NBRC 12172, complete genomeputative site-specific recombinase6e-0753.9
NC_012563:1681639:170013117001311700736606Clostridium botulinum A2 str. Kyoto, complete genomephage integrase family protein9e-0753.5
NC_009617:1085000:108757010875701088175606Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephage integrase family protein1e-0653.1
NC_016894:3580274:358909935890993589713615Acetobacterium woodii DSM 1030 chromosome, complete genomehypothetical protein1e-0653.1
NC_020064:3825916:384373738437373844636900Serratia marcescens FGI94, complete genometyrosine recombinase XerD3e-0652
NC_015875:34270:484594845949001543Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein4e-0651.6
NC_020181:4800298:480979548097954810412618Enterobacter aerogenes EA1509E, complete genomephage integrase family protein5e-0651.2
NC_008536:435221:442656442656443567912Solibacter usitatus Ellin6076, complete genomephage integrase family protein5e-0651.2
NC_016048:308342:333778333778334593816Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase5e-0651.2
NC_008321:1993541:200790620079062008544639Shewanella sp. MR-4, complete genomephage integrase family protein5e-0650.8
NC_007645:1785000:179918717991871800041855Hahella chejuensis KCTC 2396, complete genometyrosine recombinase XerD7e-0650.8
NC_014958:557208:572861572861573754894Deinococcus maricopensis DSM 21211 chromosome, complete genomeintegrase family protein8e-0650.4
NC_020134:1941523:195526219552621955822561Clostridium stercorarium subsp. stercorarium DSM 8532, completeintegrase family protein8e-0650.4
NC_006512:1722138:174273917427391743299561Idiomarina loihiensis L2TR, complete genomeIntegrase/recombinase, XerC/XerD family9e-0650.1
NC_014958:843456:856736856736857629894Deinococcus maricopensis DSM 21211 chromosome, complete genomeintegrase family protein1e-0550.1