Pre_GI: BLASTP Hits

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Query: NC_010723:2873886:2878867 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 2878867, End: 2879820, Length: 954

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010674:3049500:305546230554623056415954Clostridium botulinum B str. Eklund 17B, complete genomeABC transporter, permease protein7e-161566
NC_020291:5093138:510236551023655103321957Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomenucleoside ABC transporter membrane protein2e-135482
NC_020291:1810527:182312818231281824084957Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomesugar ABC transporter, permease protein2e-135482
NC_008262:1721496:173663817366381737591954Clostridium perfringens SM101, complete genomesugar ABC transporter3e-133474
NC_015500:78223:807898078981736948Treponema brennaborense DSM 12168 chromosome, complete genomeABC-type transporter, integral membrane subunit4e-96351
NC_014150:1123570:112726111272611128214954Brachyspira murdochii DSM 12563 chromosome, complete genomeinner-membrane translocator1e-71270
NC_017243:314000:314706314706315659954Brachyspira intermedia PWS/A chromosome, complete genomeinner membrane translocator2e-70266
NC_012225:1775264:179344217934421794395954Brachyspira hyodysenteriae WA1, complete genomeinner membrane translocator2e-70266
NC_011772:3705878:372787737278773728836960Bacillus cereus G9842, complete genomesugar ABC transporter, permease protein2e-66253
NC_012472:3625800:364426236442623645221960Bacillus cereus 03BB102, complete genomesugar ABC transporter, permease protein1e-66253
NC_008600:3611038:362625536262553627214960Bacillus thuringiensis str. Al Hakam, complete genomeABC transporter, permease1e-66253
NC_017200:3622838:364119236411923642151960Bacillus thuringiensis serovar finitimus YBT-020 chromosome,sugar ABC transporter permease9e-67253
NC_008054:1815723:183529818352981836254957Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeABC transporter, permease protein1e-58226
NC_008593:555463:562564562564563481918Clostridium novyi NT, complete genomeABC transporter, permease protein4e-47188
NC_015425:604842:613075613075613992918Clostridium botulinum BKT015925 chromosome, complete genomesugar ABC transporter permease2e-46186
NC_014614:1259236:127357712735771274509933Clostridium sticklandii, complete genomeNucleoside transport system permease protein1e-43177
NC_009617:3647500:365139036513903652274885Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator2e-43176
NC_009617:4761000:476704047670404767924885Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator4e-42172
NC_019970:2263427:227931322793132280236924Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeputative ABC-type transport system, permease component2e-41169
NC_015555:1989463:200736820073682008291924Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeABC-type transporter, integral membrane subunit4e-41168
NC_009012:1901492:191113919111391912074936Clostridium thermocellum ATCC 27405, complete genomeinner-membrane translocator4e-41168
NC_016627:1960097:196786219678621968797936Clostridium clariflavum DSM 19732 chromosome, complete genomeABC transporter permease2e-40166
NC_011661:1175743:117574311757431176669927Dictyoglomus turgidum DSM 6724, complete genomeinner-membrane translocator4e-39162
NC_013517:1249466:125495812549581255812855Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator6e-39161
NC_013517:1916020:192436019243601925214855Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator6e-39161
NC_013205:19295:420634206342980918Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,inner-membrane translocator1e-37157
NC_013192:664408:671159671159672028870Leptotrichia buccalis DSM 1135, complete genomeinner-membrane translocator1e-37157
NC_007802:1240989:125959112595911260532942Jannaschia sp. CCS1, complete genomeinner-membrane translocator1e-35150
NC_013171:312500:332941332941333879939Anaerococcus prevotii DSM 20548, complete genomeinner-membrane translocator7e-34144
NC_008212:1685367:1695106169510616962271122Haloquadratum walsbyi DSM 16790, complete genomeABC-type ribose transport system, permease protein1e-32140
NC_015474:252390:269871269871270779909Pyrococcus sp. NA2 chromosome, complete genomeribose ABC transporter, permease protein1e-30134
NC_008570:236500:236526236526237491966Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeputative transport system permease abc transporter protein1e-30134
NC_000868:416958:438030438030438938909Pyrococcus abyssi GE5, complete genomeribose ABC transporter, permease protein3e-29129
NC_013517:825100:827670827670828575906Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator5e-29128
NC_014364:111000:126707126707127633927Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeinner-membrane translocator5e-29128
NC_010673:703816:723781723781724707927Borrelia hermsii DAH, complete genomehypothetical protein1e-28127
NC_006055:769418:772503772503773402900Mesoplasma florum L1, complete genomeribose ABC transporter permease component9e-29127
NC_000961:1481685:150245415024541503362909Pyrococcus horikoshii OT3, complete genomehypothetical protein7e-27121
NC_015138:2270181:226926122692612270184924Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeinner-membrane translocator2e-26120
NC_013169:805124:8051248051248064581335Kytococcus sedentarius DSM 20547, complete genomenucleoside ABC transporter membrane protein3e-26119
NC_008710:703740:721199721199722125927Borrelia turicatae 91E135, complete genomesugar transport system permease protein7e-26118
NC_013967:1878045:1879172187917218802271056Haloferax volcanii DS2 chromosome, complete genomeABC-type transport system permease protein (probable substrate sugar)6e-26118
NC_014328:3294086:330545433054543306383930Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ABC transporter permease1e-25117
NC_009376:1442314:144331514433151444205891Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeinner-membrane translocator2e-24113
NC_016633:14000:192631926320201939Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeABC transporter permease2e-23110
NC_015152:2622000:263502126350212635983963Spirochaeta sp. Buddy chromosome, complete genomeABC transporter inner membrane protein4e-22105
NC_017075:4880807:490115949011594902094936Rubrivivax gelatinosus IL144, complete genomeputative ABC transporter permease2e-21103
NC_015856:268034:270797270797271717921Collimonas fungivorans Ter331 chromosome, complete genomeputative transmembrane ABC transporter protein1e-21103
NC_011985:1831961:185429118542911855211921Agrobacterium radiobacter K84 chromosome 1, complete genomesugar ABC transporter6e-21101
NC_012785:1960500:196234819623481963229882Kosmotoga olearia TBF 19.5.1, complete genomeinner-membrane translocator8e-21101
NC_017075:4880807:488190048819004882868969Rubrivivax gelatinosus IL144, complete genomeputative ABC transporter permease1e-20100
NC_010725:4618000:463083546308354631770936Methylobacterium populi BJ001, complete genomeinner-membrane translocator7e-1994.7
NC_017079:261736:296359296359297309951Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeABC transporter permease9e-1994.4
NC_015315:1458803:146005014600501460916867Thermoproteus uzoniensis 768-20 chromosome, complete genomeinner-membrane translocator1e-1894.4
NC_021182:380500:399998399998400927930Clostridium pasteurianum BC1, complete genomeputative ABC-type transport system, permease component1e-1894.4
NC_014150:2399997:240654924065492407487939Brachyspira murdochii DSM 12563 chromosome, complete genomeinner-membrane translocator2e-1893.2
NC_010723:3499291:350809135080913509005915Clostridium botulinum E3 str. Alaska E43, complete genomeinner-membrane translocator8e-1787.8
NC_001263:243000:247495247495247959465Deinococcus radiodurans R1 chromosome 1, complete sequencehypothetical protein7e-1684.7
NC_010001:986500:991233991233992192960Clostridium phytofermentans ISDg, complete genomeinner-membrane translocator4e-1582.4
NC_010525:1177154:117811011781101178976867Thermoproteus neutrophilus V24Sta, complete genomeinner-membrane translocator3e-1376.3
NC_015931:1653604:166054016605401661403864Pyrolobus fumarii 1A, complete genomeinner-membrane translocator2e-1273.2
NC_014168:994640:9983519983519995531203Segniliparus rotundus DSM 44985 chromosome, complete genomeinner-membrane translocator2e-1273.2
NC_016627:1960097:1968797196879719699151119Clostridium clariflavum DSM 19732 chromosome, complete genomeABC transporter permease1e-1170.5
NC_009012:1901492:1910020191002019111381119Clostridium thermocellum ATCC 27405, complete genomeinner-membrane translocator2e-1170.1
NC_016751:1524848:153738915373891538312924Marinitoga piezophila KA3 chromosome, complete genomeABC transporter permease2e-1169.7
NC_013517:3846747:385178138517813852710930Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator2e-0963.2
NC_012225:1775264:1792295179229517934101116Brachyspira hyodysenteriae WA1, complete genomeinner-membrane-translocator8e-0961.6
NC_017243:314000:3156913156913168061116Brachyspira intermedia PWS/A chromosome, complete genomeinner-membrane-translocator8e-0961.6
NC_013171:312500:3317783317783329441167Anaerococcus prevotii DSM 20548, complete genomeinner-membrane translocator9e-0961.2
NC_014363:1396912:141949614194961420410915Olsenella uli DSM 7084 chromosome, complete genomenucleoside ABC transporter membrane protein2e-0860.5
NC_014205:622627:644807644807645718912Staphylothermus hellenicus DSM 12710 chromosome, complete genomeinner-membrane translocator2e-0860.1
NC_009033:133800:136451136451137359909Staphylothermus marinus F1, complete genomeinner-membrane translocator2e-0860.1
NC_014614:432000:4392694392694403301062Clostridium sticklandii, complete genomeYufP3e-0859.7
NC_014614:432000:440330440330440872543Clostridium sticklandii, complete genomeInner-membrane translocator (fragment)4e-0858.9
NC_011661:1175743:1174647117464711757501104Dictyoglomus turgidum DSM 6724, complete genomeinner-membrane translocator4e-0755.8
NC_014614:1259236:1272508127250812735721065Clostridium sticklandii, complete genomeABC transporter, permease5e-0755.5
NC_010723:2873886:2879822287982228809761155Clostridium botulinum E3 str. Alaska E43, complete genomeABC transporter, permease protein2e-0653.5
NC_014614:432000:440820440820441233414Clostridium sticklandii, complete genomesugar ABC transporter, permease protein (fragment)3e-0653.1
NC_010674:3049500:3056417305641730575711155Clostridium botulinum B str. Eklund 17B, complete genomeABC transporter, permease protein3e-0653.1
NC_013517:3846747:3852715385271538537461032Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator4e-0652.4
NC_013205:19295:4301743017440901074Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,inner-membrane translocator1e-0551.2