Pre_GI: BLASTP Hits

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Query: NC_010673:291679:294362 Borrelia hermsii DAH, complete genome

Start: 294362, End: 295150, Length: 789

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:277207:293652293652294440789Borrelia turicatae 91E135, complete genomechemotaxis MotB protein2e-133474
NC_006156:271410:290412290412291194783Borrelia garinii PBi chromosome linear, complete sequenceflagellar motor protein2e-111402
NC_017238:272980:290753290753291535783Borrelia afzelii PKo chromosome, complete genomeompA family protein1e-110399
NC_008277:272741:290514290514291296783Borrelia afzelii PKo, complete genomeflagellar motor rotation protein B1e-110399
NC_011728:269853:291012291012291794783Borrelia burgdorferi ZS7, complete genomeflagellar motor protein MotB3e-110397
NC_001318:270488:291644291644292426783Borrelia burgdorferi B31, complete genomeflagellar motor protein3e-110397
NC_015921:272517:290193290193290921729Borrelia bissettii DN127 chromosome, complete genomeompA family protein7e-102370
NC_015714:768500:785056785056785778723Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeMot family proton (H+) or sodium (Na+) transporter MotB8e-36150
NC_010741:775000:791622791622792338717Treponema pallidum subsp. pallidum SS14, complete genomeflagellar motor rotation protein2e-35149
NC_000919:773784:790174790174790890717Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar motor protein2e-35149
NC_017268:775000:791424791424792140717Treponema pallidum subsp. pallidum str. Chicago chromosome,chemotaxis protein MotB2e-35149
NC_021508:775264:791654791654792370717Treponema pallidum subsp. pallidum SS14, complete genomeMot family proton (H+) or sodium (Na+) transporter MotB2e-35149
NC_016842:775368:791758791758792480723Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeMot family proton (H+) or sodium (Na+) transporter MotB2e-35149
NC_016843:775371:791945791945792667723Treponema pallidum subsp. pertenue str. Gauthier chromosome,Mot family proton (H+) or sodium (Na+) transporter MotB2e-35149
NC_016844:775334:792112792112792834723Treponema pallidum subsp. pallidum DAL-1 chromosome, completeMot family proton (H+) or sodium (Na+) transporter MotB2e-35149
NC_016848:775822:792212792212792934723Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeMot family proton (H+) or sodium (Na+) transporter MotB2e-35149
NC_018604:2303239:230991623099162310716801Brachyspira pilosicoli WesB complete genomeflagellar motor protein MotB3e-24112
NC_014330:841841:850582850582851382801Brachyspira pilosicoli 95/1000 chromosome, complete genomeflagellar motor protein MotB3e-24112
NC_018607:2184832:219150921915092192309801Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar motor protein MotB4e-24111
NC_015172:2628128:267525626752562676077822Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeOmpA/MotB domain protein1e-1997.1
NC_019978:625476:641883641883642599717Halobacteroides halobius DSM 5150, complete genomeflagellar motor protein1e-1997.1
NC_010723:3530000:357316535731653573899735Clostridium botulinum E3 str. Alaska E43, complete genomechemotaxis MotB protein1e-1997.1
NC_010674:3674739:371578037157803716514735Clostridium botulinum B str. Eklund 17B, complete genomechemotaxis MotB protein6e-1994.7
NC_009617:4911595:492938549293854930140756Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeOmpA/MotB domain-containing protein9e-1994
NC_003030:303812:358748358748359518771Clostridium acetobutylicum ATCC 824, complete genomeChemotaxis motility protein B, gene motB2e-1893.2
NC_015687:303810:358744358744359514771Clostridium acetobutylicum DSM 1731 chromosome, complete genomechemotaxis motility protein B, motB2e-1893.2
NC_010814:3673983:369606836960683696910843Geobacter lovleyi SZ, complete genomeOmpA/MotB domain protein3e-1892.4
NC_014393:187454:201434201434202204771Clostridium cellulovorans 743B chromosome, complete genomeOmpA/MotB domain-containing protein1e-1790.1
NC_016641:872394:878436878436879248813Paenibacillus terrae HPL-003 chromosome, complete genomeompa/motb domain-containing protein3e-1789
NC_009697:2714668:2715908271590827171701263Clostridium botulinum A str. ATCC 19397 chromosome, completechemotaxis motB protein5e-1788.2
NC_014483:4740214:474625947462594747074816Paenibacillus polymyxa E681 chromosome, complete genomeFlagellar motor protein8e-1787.4
NC_009698:2649453:265335426533542654097744Clostridium botulinum A str. Hall chromosome, complete genomechemotaxis protein MotB8e-1787.4
NC_018664:1663324:167366516736651674402738Clostridium acidurici 9a chromosome, complete genomeOmpA/MotB domain-containing protein1e-1687
NC_010520:2860960:286486228648622865605744Clostridium botulinum A3 str. Loch Maree, complete genomechemotaxis motB protein2e-1685.9
UCMB5137:2418403:244106824410682441787720Bacillus atrophaeus UCMB-5137flagellar motor protein MotS9e-1684
NC_009633:2725128:272775027277502728481732Alkaliphilus metalliredigens QYMF chromosome, complete genomeOmpA/MotB domain-containing protein4e-1581.6
NC_008593:1103293:112016711201671120892726Clostridium novyi NT, complete genomechemotaxis motB protein7e-1581.3
NC_015222:1127675:113013411301341130928795Nitrosomonas sp. AL212 chromosome, complete genomeOmpA/MotB domain-containing protein2e-1479.3
NC_016002:3077648:308054630805463081361816Pseudogulbenkiania sp. NH8B, complete genomeOmpA/MotB domain containing protein4e-1478.6
NC_010723:833870:848163848163848906744Clostridium botulinum E3 str. Alaska E43, complete genomechemotaxis protein MotB9e-1477.4
NC_010674:858397:869855869855870598744Clostridium botulinum B str. Eklund 17B, complete genomechemotaxis protein MotB1e-1377
NC_009664:533021:5415925415925426201029Kineococcus radiotolerans SRS30216, complete genomeOmpA/MotB domain protein2e-1376.6
NC_007907:321537:339407339407340201795Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1376.3
CP002207:2452286:247509924750992475728630Bacillus atrophaeus 1942, complete genomeflagellar motor protein MotS8e-1374.3
NC_014639:2452286:247509924750992475728630Bacillus atrophaeus 1942 chromosome, complete genomeflagellar motor protein MotS8e-1374.3
NC_019903:223843:226620226620227384765Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,flagellar motor protein1e-1273.9
NC_011979:3409610:3410787341078734118361050Geobacter sp. FRC-32, complete genomeOmpA/MotB domain protein3e-1272.8
NC_012881:3727150:374548437454843746230747Desulfovibrio salexigens DSM 2638, complete genomeOmpA/MotB domain protein4e-1272
NC_007298:778723:817714817714818487774Dechloromonas aromatica RCB, complete genomeflagellar motor protein4e-1272
NC_008789:350650:388958388958389698741Halorhodospira halophila SL1, complete genomeOmpA/MotB domain protein6e-1271.2
NC_012491:5628000:563189156318915632673783Brevibacillus brevis NBRC 100599, complete genomeprobable chemotaxis protein8e-1270.9
NC_013768:721897:724691724691725518828Listeria monocytogenes 08-5923, complete genomehypothetical protein1e-1170.5
NC_013766:757987:757987757987758814828Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein1e-1170.5
NC_002973:730942:734956734956735783828Listeria monocytogenes str. 4b F2365, complete genomechemotaxis protein MotB1e-1170.5
NC_013722:1577818:159680715968071597760954Xanthomonas albilineans, complete genomeprobable flagellar motor protein2e-1169.7
NC_016894:2931213:294004029400402940789750Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar motor protein MotB2e-1169.7
NC_017195:1411936:141117914111791411964786Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeflagellar stator motB3e-1169.3
NC_013223:685628:703470703470704216747Desulfohalobium retbaense DSM 5692, complete genomeOmpA/MotB domain protein3e-1169.3
NC_016803:465453:466996466996467748753Desulfovibrio desulfuricans ND132 chromosome, complete genomeOmpA/MotB domain-containing protein4e-1168.6
NC_009698:2265475:228391022839102284674765Clostridium botulinum A str. Hall chromosome, complete genomechemotaxis protein MotB2e-1066.2
NC_011988:1036618:1059839105983910613741536Agrobacterium vitis S4 chromosome 2, complete genomeOmpA-type porin3e-1065.9
NC_008609:3672653:370415137041513704951801Pelobacter propionicus DSM 2379, complete genomeOmpA/MotB domain protein3e-1065.9
NC_019960:1362370:138050013805001381357858Prevotella dentalis DSM 3688 chromosome 1, complete sequenceflagellar motor protein7e-1064.3
NC_011126:555483:566712566712567527816Hydrogenobaculum sp. Y04AAS1, complete genomeOmpA/MotB domain protein8e-1064.3
NC_015410:3093465:309471930947193095507789Pseudomonas mendocina NK-01 chromosome, complete genomeOmpA/MotB domain-containing protein1e-0963.5
NC_020911:2921925:2971930297193029731801251Octadecabacter antarcticus 307, complete genomeMotB-like flagellar motor protein1e-0963.5
NC_020126:2216926:2216926221692622225475622Myxococcus stipitatus DSM 14675, complete genomekelch domain-containing protein2e-0963.2
NC_012108:4118888:412124541212454122063819Desulfobacterium autotrophicum HRM2, complete genomeMotB32e-0963.2
NC_019897:3810000:382923838292383830077840Thermobacillus composti KWC4 chromosome, complete genomeflagellar motor protein2e-0962.8
NC_009832:1946401:1963068196306819647771710Serratia proteamaculans 568, complete genomeOmpA/MotB domain protein3e-0962.4
NC_020409:437781:453048453048453797750Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeOmpA/MotB domain protein3e-0962.4
NC_014118:1171411:1189956118995611911881233Burkholderia sp. CCGE1002 chromosome chromosome 2, completeOmpA/MotB domain protein4e-0962
NC_017060:125480:1254801254801271561677Rahnella aquatilis HX2 plasmid PRA1, complete sequenceOmpA/MotB domain-containing protein4e-0962
NC_011001:854713:859935859935860606672Burkholderia cenocepacia J2315 chromosome 2, complete sequenceOmpA family protein5e-0961.6
NC_011283:2103500:2105625210562521073221698Klebsiella pneumoniae 342 chromosome, complete genomeOmpA domain-containing protein5e-0961.6
NC_007520:407627:408349408349409041693Thiomicrospira crunogena XCL-2, complete genomeOmpA/MotB9e-0960.8
NC_012731:3193880:3211181321118132128781698Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein9e-0960.8
NC_009648:2465613:2488774248877424904711698Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein9e-0960.8
NC_016845:3238507:3259981325998132616781698Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein9e-0960.8
NC_013956:4579759:4594394459439445961811788Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein9e-0960.8
NC_007508:2234080:223486422348642235838975Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeflagellar motor protein1e-0860.5
NC_010067:2529750:2553071255307125547501680Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0860.1
NC_012721:137046:1552481552481569571710Burkholderia glumae BGR1 chromosome 2, complete genomeOuter membrane protein2e-0860.1
NC_008543:582129:587351587351588022672Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceOmpA/MotB domain protein2e-0859.7
NC_015391:2059191:207910020791002079717618Carnobacterium sp. 17-4 chromosome, complete genomeuncharacterized protein YtxE4e-0858.9
NC_017059:31564:600236002360712690Rhodospirillum photometricum DSM 122, complete genomeOmpA/MotB protein3e-0858.9
NC_016803:465453:466227466227466991765Desulfovibrio desulfuricans ND132 chromosome, complete genomeOmpA/MotB domain-containing protein3e-0858.9
NC_020409:437781:452272452272453036765Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeOmpA/MotB domain protein3e-0858.9
NC_012225:212727:2300782300782312891212Brachyspira hyodysenteriae WA1, complete genomeouter membrane protein OmpA family6e-0858.2
NC_012721:1395417:1416969141696914187771809Burkholderia glumae BGR1 chromosome 2, complete genomeOuter membrane protein8e-0857.8
NC_015740:2614317:264011026401102640844735Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeflagellar motor protein MotB1e-0757.4
NC_007519:3527207:354461935446193545347729Desulfovibrio alaskensis G20 chromosome, complete genomechemotaxis protein MotB1e-0757.4
NC_019907:920797:9394979394979405041008Liberibacter crescens BT-1 chromosome, complete genomeFlagellar motor rotation protein MotB1e-0757.4
NC_015222:1607757:162435516243551625188834Nitrosomonas sp. AL212 chromosome, complete genomeOmpA/MotB domain-containing protein2e-0756.6
NC_007493:1929000:1950647195064719517471101Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceflagellar MotB protein3e-0755.8
NC_010501:3575726:3597764359776435994941731Pseudomonas putida W619, complete genomeOmpA/MotB domain protein4e-0755.5
NC_016845:2306744:2330351233035123320571707Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,OmpA/MotB domain-containing protein4e-0755.5
NC_012731:2302974:2302974230297423046801707Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative outer membrane protein4e-0755.1
NC_016612:5600177:5616951561695156186751725Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein5e-0755.1
NC_014355:220002:2348272348272360291203Candidatus Nitrospira defluvii, complete genomeputative OmpA/MotB family outer membrane protein7e-0754.7
NC_009648:1487692:1487692148769214893981707Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative outer membrane protein7e-0754.7
NC_017243:1901898:1910513191051319117241212Brachyspira intermedia PWS/A chromosome, complete genomeouter membrane protein OmpA family8e-0754.3
NC_011026:2269986:2297669229766922988651197Chloroherpeton thalassium ATCC 35110, complete genomeOmpA/MotB domain protein9e-0754.3
NC_007953:1434705:145176914517691452461693Burkholderia xenovorans LB400 chromosome 3, complete sequenceputative flagellar motor protein (MotB)9e-0754.3
NC_010805:1576735:1584211158421115855091299Burkholderia multivorans ATCC 17616 chromosome 2, completeOmpA/MotB domain protein1e-0653.9
NC_010086:871723:8897988897988910931296Burkholderia multivorans ATCC 17616 chromosome 2, completetype VI secretion system OmpA/MotB family protein1e-0653.9
NC_004605:1092476:1098604109860410999051302Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein2e-0653.1
NC_018524:3561658:357005335700533570565513Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeompA family protein2e-0652.8
NC_014150:2924158:2939694293969429409051212Brachyspira murdochii DSM 12563 chromosome, complete genomeOmpA/MotB domain protein3e-0652.4
NC_016590:1183470:1204844120484412065921749Burkholderia sp. YI23 chromosome 3, complete sequenceOmpA/MotB family outer membrane protein5e-0651.6
NC_013730:6933754:696795969679596968843885Spirosoma linguale DSM 74, complete genomeOmpA/MotB domain protein7e-0651.2
NC_005071:988815:997299997299997943645Prochlorococcus marinus str. MIT 9313, complete genomeBacterial outer membrane protein9e-0650.8