Pre_GI: BLASTP Hits

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Query: NC_010407:32960:43805 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 43805, End: 44287, Length: 483

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017186:9120711:915435891543589154774417Amycolatopsis mediterranei S699 chromosome, complete genomelarge conductance mechanosensitive channel, MscL family protein3e-1477.8
NC_008541:3282415:328640832864083286800393Arthrobacter sp. FB24 chromosome 1, complete sequencelarge conductance mechanosensitive channel protein7e-1373.2
NC_011886:2950411:295657929565792956968390Arthrobacter chlorophenolicus A6, complete genomelarge conductance mechanosensitive channel protein2e-1271.6
NC_010320:1860801:186132418613241861704381Thermoanaerobacter sp. X514 chromosome, complete genomelarge conductance mechanosensitive channel protein3e-1270.9
NC_014538:1075720:109264010926401093020381Thermoanaerobacter sp. X513 chromosome, complete genomelarge conductance mechanosensitive channel protein3e-1270.9
NC_014964:923681:954603954603954971369Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completelarge conductance mechanosensitive channel protein3e-1167.4
NC_010321:947233:962410962410962778369Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completelarge conductance mechanosensitive channel protein3e-1167.4
NC_014209:1392115:140480614048061405174369Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,large conductance mechanosensitive channel protein5e-1167
NC_018750:3315309:332050733205073321115609Streptomyces venezuelae ATCC 10712, complete genomeLarge-conductance mechanosensitive channel7e-1166.2
NC_007777:75885:886998869989094396Frankia sp. CcI3, complete genomelarge conductance mechanosensitive channel protein2e-1064.7
NC_008618:10915:124521245212895444Bifidobacterium adolescentis ATCC 15703, complete genomelarge-conductance mechanosensitive channel3e-1064.3
NC_008254:102465:118021118021118449429Mesorhizobium sp. BNC1, complete genomelarge conductance mechanosensitive channel protein4e-1063.9
NC_013174:2163947:216573421657342166132399Jonesia denitrificans DSM 20603, complete genomelarge conductance mechanosensitive channel protein4e-0960.5
NC_015145:2942500:294651629465162946926411Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomelarge conductance mechanosensitive channel protein9e-0959.3
NC_015848:1105892:111183211118321112287456Mycobacterium canettii CIPT 140010059, complete genomeputative large-conductance ion mechanosensitive channel MSCL1e-0858.9
NC_008769:1125567:113151411315141131969456Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative large-conductance ion mechanosensitive channel mscL1e-0858.5
NC_012207:1097228:110317511031751103630456Mycobacterium bovis BCG str. Tokyo 172, complete genomelarge-conductance mechanosensitive channel1e-0858.5
NC_016804:1095846:110179311017931102248456Mycobacterium bovis BCG str. Mexico chromosome, complete genomeLarge-conductance mechanosensitive channel1e-0858.5
NC_009525:1096386:110233311023331102788456Mycobacterium tuberculosis H37Ra, complete genomelarge-conductance mechanosensitive channel1e-0858.5
NC_002945:1095337:110147611014761101931456Mycobacterium bovis AF2122/97, complete genomelarge-conductance mechanosensitive channel1e-0858.5
NC_002755:1095105:110106411010641101519456Mycobacterium tuberculosis CDC1551, complete genomelarge-conductance mechanosensitive channel1e-0858.5
NC_009565:1098847:110479411047941105249456Mycobacterium tuberculosis F11, complete genomelarge-conductance ion mechanosensitive channel mscL1e-0858.5
NC_000962:1095078:110102511010251101480456Mycobacterium tuberculosis H37Rv, complete genomelarge-conductance mechanosensitive channel1e-0858.5
NC_012943:3299744:331048733104873310942456Mycobacterium tuberculosis KZN 1435 chromosome, complete genomelarge-conductance mechanosensitive channel1e-0858.5
NC_016768:3296478:330722133072213307676456Mycobacterium tuberculosis KZN 4207 chromosome, complete genomelarge-conductance ion mechanosensitive channel mscL1e-0858.5
NC_017026:1095753:110170511017051102160456Mycobacterium tuberculosis RGTB327 chromosome, complete genomelarge-conductance mechanosensitive channel1e-0858.5
NC_010161:596034:601845601845602255411Bartonella tribocorum CIP 105476, complete genomehypothetical protein4e-0857.4
NC_013656:2382000:239589923958992396267369Lactococcus lactis subsp. lactis KF147, complete genomelarge-conductance mechanosensitive channel7e-0856.2
NC_021064:1789980:181195818119581812326369Propionibacterium avidum 44067, complete genomelarge conductance mechanosensitive channel2e-0755.1
NC_013595:9547254:955105695510569551460405Streptosporangium roseum DSM 43021, complete genomelarge conductance mechanosensitive channel protein3e-0754.3
NC_010572:3363830:341006134100613410528468Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative large-conductance mechanosensitive channel protein3e-0754.3
NC_016109:3525588:353665335366533537087435Kitasatospora setae KM-6054, complete genomeputative large-conductance mechanosensitive channel4e-0753.9
NC_015759:1117122:113952211395221139905384Weissella koreensis KACC 15510 chromosome, complete genomelarge conductance mechanosensitive channel protein9e-0752.8
NC_013510:991827:100630710063071006711405Thermomonospora curvata DSM 43183, complete genomelarge conductance mechanosensitive channel protein2e-0651.6
NC_018867:1161648:116164811616481162052405Dehalobacter sp. CF chromosome, complete genomeLarge-conductance mechanosensitive channel4e-0650.8