Pre_GI: BLASTP Hits

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Query: NC_010102:997417:1002282 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1002282, End: 1002413, Length: 132

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:1987291:201844220184422019314873Salmonella enterica subsp. enterica serovar Agona str. SL483,DNA-binding prophage protein4e-1683.2
NC_016831:947281:953938953938954636699Salmonella enterica subsp. enterica serovar Gallinarum/pullorumPutative DNA-binding protein4e-1683.2
NC_011274:2044000:207995120799512080649699Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91DNA-binding protein4e-1683.2
NC_011294:2053991:208881820888182089516699Salmonella enterica subsp. enterica serovar Enteritidis strDNA-binding protein1e-1582
NC_010468:1816359:184232618423261843210885Escherichia coli ATCC 8739, complete genomehypothetical protein5e-1166.6
NC_010067:3204682:320912132091213209705585Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1065.5
NC_008149:3251196:326447532644753265362888Yersinia pestis Nepal516, complete genomeDNA-binding prophage protein7e-0959.3
NC_004088:3382148:339541733954173396313897Yersinia pestis KIM, complete genomehypothetical protein7e-0959.3
NC_003143:1233128:123851212385121239408897Yersinia pestis CO92, complete genomeputative DNA-binding prophage protein7e-0959.3
NC_008150:650899:655248655248656135888Yersinia pestis Antiqua, complete genomeputative DNA-binding prophage protein7e-0959.3
NC_010159:1417993:142266414226641423551888Yersinia pestis Angola, complete genomeputative DNA-binding prophage protein7e-0959.3
NC_005810:1130251:114352111435211144417897Yersinia pestis biovar Microtus str. 91001, complete genomeputative DNA-binding prophage protein7e-0959.3
NC_009381:2939782:295306029530602953947888Yersinia pestis Pestoides F chromosome, complete genomeputative DNA-binding prophage protein7e-0959.3
NC_014029:1283500:128770912877091288596888Yersinia pestis Z176003 chromosome, complete genomeDNA-binding prophage protein7e-0959.3
NC_017154:1225500:122980212298021230689888Yersinia pestis D106004 chromosome, complete genomeDNA-binding prophage protein7e-0959.3
NC_017160:1507500:152092215209221521809888Yersinia pestis D182038 chromosome, complete genomeDNA-binding prophage protein7e-0959.3
NC_017168:4155143:416052841605284161415888Yersinia pestis A1122 chromosome, complete genomeputative DNA-binding prophage protein7e-0959.3
NC_017265:1136000:113984211398421140738897Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative DNA-binding prophage protein7e-0959.3
NC_012880:4117376:412064241206424121523882Dickeya dadantii Ech703, complete genomeputative DNA-binding prophage protein8e-0752.4
NC_014500:443874:458532458532459413882Dickeya dadantii 3937 chromosome, complete genomeputative DNA-binding prophage protein8e-0752.4
NC_011083:2847318:287494528749452875820876Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA-binding prophage protein1e-0651.6
NC_003197:2894344:290043929004392901314876Salmonella typhimurium LT2, complete genomeputative integrase1e-0651.6
NC_016810:2871689:292300529230052923880876Salmonella enterica subsp. enterica serovar Typhimurium strDNA-binding bacteriophage protein1e-0651.6
NC_016856:2896630:292066429206642921539876Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative integrase1e-0651.6
NC_016857:2871689:292300529230052923880876Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative integrase1e-0651.6
NC_016860:2917910:292400529240052924880876Salmonella enterica subsp. enterica serovar Typhimurium strDNA-binding prophage protein1e-0651.6
NC_016863:2844883:286891728689172869792876Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative integrase1e-0651.6
NC_017046:2896651:292174629217462922621876Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA-binding bacteriophage protein1e-0651.6
NC_013592:4295449:430119543011954302076882Dickeya dadantii Ech586, complete genomeintegrase domain protein SAM domain protein2e-0651.2
NC_012912:4194821:419839941983994199280882Dickeya zeae Ech1591, complete genomehypothetical protein3e-0650.8