Pre_GI: BLASTP Hits

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Query: NC_010001:4486170:4496890 Clostridium phytofermentans ISDg, complete genome

Start: 4496890, End: 4497072, Length: 183

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014376:4048728:405630440563044056486183Clostridium saccharolyticum WM1 chromosome, complete genomeribosomal protein L304e-1683.2
NC_015737:1931541:194846219484621948644183Clostridium sp. SY8519, complete genome50S ribosomal protein L30/L7E4e-1683.2
NC_015275:3846260:385271038527103852895186Clostridium lentocellum DSM 5427 chromosome, complete genomeribosomal protein L304e-1476.6
NC_015977:3127500:313349831334983133683186Roseburia hominis A2-183 chromosome, complete genome50S ribosomal protein L301e-1168.9
NC_013928:1828099:184781818478181848000183Streptococcus mutans NN2025, complete genome50S ribosomal protein L302e-1064.7
NC_014614:2295131:230050323005032300682180Clostridium sticklandii, complete genome50S ribosomal subunit protein L302e-1064.3
NC_012781:379200:392327392327392509183Eubacterium rectale ATCC 33656, complete genomehypothetical protein3e-1063.9
NC_013525:766848:789546789546789734189Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeribosomal protein L304e-1063.2
NC_016630:1462788:146646114664611466631171Filifactor alocis ATCC 35896 chromosome, complete genome50S ribosomal protein L307e-1062.4
NC_007645:6327428:633679863367986336989192Hahella chejuensis KCTC 2396, complete genomeribosomal protein L308e-1062.4
NC_014925:1970500:197332119733211973500180Staphylococcus pseudintermedius HKU10-03 chromosome, completeLSU ribosomal protein L30p (L7e)8e-1062.4
NC_008148:2156873:216032121603212160506186Rubrobacter xylanophilus DSM 9941, complete genomeribosomal protein L304e-0960.1
NC_011999:198769:211993211993212172180Macrococcus caseolyticus JCSC5402, complete genome50S ribosomal protein L304e-0960.1
NC_016629:2449731:245633424563342456501168Desulfovibrio africanus str. Walvis Bay chromosome, complete50S ribosomal protein L306e-0959.3
NC_009092:179226:187746187746187928183Shewanella loihica PV-4, complete genomeribosomal protein L301e-0858.9
NC_014246:373247:375783375783375968186Mobiluncus curtisii ATCC 43063 chromosome, complete genome50S ribosomal protein l309e-0958.9
NC_007795:2299327:230939823093982309577180Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeribosomal protein L302e-0858.2
NC_002758:2359329:236940023694002369579180Staphylococcus aureus subsp. aureus Mu50, complete genome50S ribosomal protein L302e-0858.2
NC_007793:2352953:236261223626122362791180Staphylococcus aureus subsp. aureus USA300, complete genome50S ribosomal protein L302e-0858.2
NC_002745:2289829:229990022999002300079180Staphylococcus aureus subsp. aureus N315, complete genome50S ribosomal protein L302e-0858.2
NC_010079:2352691:236276223627622362941180Staphylococcus aureus subsp. aureus USA300_TCH1516, completeribosomal protein L302e-0858.2
NC_003923:2301234:231130523113052311484180Staphylococcus aureus subsp. aureus MW2, complete genome50S ribosomal protein L302e-0858.2
NC_002952:2390668:239884723988472399026180Staphylococcus aureus subsp. aureus MRSA252, complete genome50S ribosomal protein L302e-0858.2
NC_002951:2288674:229874522987452298924180Staphylococcus aureus subsp. aureus COL, complete genomeribosomal protein L30p/L7e2e-0858.2
NC_007622:2239799:224986822498682250047180Staphylococcus aureus RF122, complete genome50S ribosomal protein L302e-0858.2
NC_009782:2362000:237103823710382371217180Staphylococcus aureus subsp. aureus Mu3, complete genome50S ribosomal protein L302e-0858.2
NC_002953:2282236:229041022904102290589180Staphylococcus aureus subsp. aureus MSSA476, complete genome50S ribosomal protein L302e-0858.2
NC_009487:2390713:239969523996952399874180Staphylococcus aureus subsp. aureus JH9 chromosome, complete50S ribosomal protein L302e-0858.2
NC_009632:2391397:239957123995712399750180Staphylococcus aureus subsp. aureus JH1 chromosome, complete50S ribosomal protein L302e-0858.2
NC_009641:2357468:236712723671272367306180Staphylococcus aureus subsp. aureus str. Newman chromosome,50S ribosomal protein L302e-0858.2
NC_014011:655266:673400673400673585186Aminobacterium colombiense DSM 12261 chromosome, complete genomeribosomal protein L302e-0858.2
NC_017351:2335753:234582523458252346004180Staphylococcus aureus subsp. aureus 11819-97 chromosome, complete50S ribosomal protein L302e-0858.2
NC_017347:2350802:236087323608732361052180Staphylococcus aureus subsp. aureus T0131 chromosome, complete50S ribosomal protein L302e-0858.2
NC_017343:2212780:222285122228512223030180Staphylococcus aureus subsp. aureus ECT-R 2, complete genome50S ribosomal protein L302e-0858.2
NC_017342:1012555:102774710277471027926180Staphylococcus aureus subsp. aureus TCH60 chromosome, complete50S ribosomal protein L302e-0858.2
NC_017341:2384736:239480723948072394986180Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,50S ribosomal protein L302e-0858.2
NC_017338:2296906:230588823058882306067180Staphylococcus aureus subsp. aureus JKD6159 chromosome, complete50S ribosomal protein L302e-0858.2
NC_017337:2319847:232950523295052329684180Staphylococcus aureus subsp. aureus ED133 chromosome, complete50S ribosomal protein L302e-0858.2
NC_016928:2249907:225956122595612259740180Staphylococcus aureus subsp. aureus M013 chromosome, complete50S ribosomal protein L30p (L7e)2e-0858.2
NC_016912:2170615:218068621806862180865180Staphylococcus aureus subsp. aureus VC40 chromosome, complete50S ribosomal protein L302e-0858.2
NC_013450:2306431:231609023160902316269180Staphylococcus aureus subsp. aureus ED98, complete genome50S ribosomal protein L302e-0858.2
NC_013037:5263272:527839252783925278571180Dyadobacter fermentans DSM 18053, complete genomeribosomal protein L302e-0857.8
NC_020134:2801199:281439628143962814575180Clostridium stercorarium subsp. stercorarium DSM 8532, completer50S ibosomal protein L302e-0857.4
NC_015516:131564:145830145830146009180Melissococcus plutonius ATCC 35311, complete genome50S ribosomal protein L30p (L7e)3e-0857
NC_016938:136331:147710147710147889180Melissococcus plutonius DAT561 chromosome 1, complete genome50S ribosomal protein L30p3e-0857
NC_017316:157254:172148172148172327180Enterococcus faecalis OG1RF chromosome, complete genome50S ribosomal protein L304e-0856.6
NC_004668:191732:207181207181207360180Enterococcus faecalis V583, complete genomeribosomal protein L304e-0856.6
NC_016941:2234937:224454922445492244728180Staphylococcus aureus subsp. aureus MSHR1132, complete genome50S ribosomal protein L305e-0856.6
NC_007350:692041:707253707253707432180Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,50S ribosomal protein L306e-0856.2
NC_013893:830282:844384844384844563180Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeLSU ribosomal protein L30p (L7e)6e-0856.2
NC_017353:825856:839958839958840137180Staphylococcus lugdunensis N920143, complete genome50S ribosomal protein L306e-0856.2
NC_020164:701151:716232716232716411180Staphylococcus warneri SG1, complete genome50S ribosomal protein L305e-0856.2
NC_002976:1844901:185367218536721853854183Staphylococcus epidermidis RP62A, complete genomeribosomal protein L307e-0855.8
NC_004461:1849176:185864518586451858824180Staphylococcus epidermidis ATCC 12228, complete genome50S ribosomal protein L307e-0855.8
NC_007168:813957:827950827950828129180Staphylococcus haemolyticus JCSC1435, complete genome50S ribosomal protein L308e-0855.8
NC_013385:1504650:150829015082901508472183Ammonifex degensii KC4, complete genomeribosomal protein L308e-0855.8
NC_017047:370837:390424390424390603180Rahnella aquatilis HX2 chromosome, complete genome50S ribosomal protein L301e-0755.5
NC_007929:1463295:148783414878341488016183Lactobacillus salivarius subsp. salivarius UCC118, complete genomeLSU ribosomal protein L30P1e-0755.5
NC_016632:1496000:151686515168651517044180Serratia symbiotica str. 'Cinara cedri' chromosome, complete50S ribosomal subunit protein L301e-0755.5
NC_011527:1688447:168888116888811689072192Coxiella burnetii CbuG_Q212, complete genomeLSU ribosomal protein L30P9e-0855.5
NC_009727:1822877:182331118233111823502192Coxiella burnetii Dugway 7E9-12, complete genomeribosomal protein L309e-0855.5
NC_002971:211331:233280233280233471192Coxiella burnetii RSA 493, complete genomeribosomal protein L30p/L7e9e-0855.5
NC_012121:1728913:173774517377451737933189Staphylococcus carnosus subsp. carnosus TM300, complete genome50S ribosomal protein L301e-0755.1
NC_014829:133305:165037165037165225189Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeribosomal protein L302e-0754.7
NC_013282:3962188:398945939894593989638180Cronobacter turicensis, complete genome50S ribosomal protein L302e-0754.7
NC_011653:1226035:124401612440161244201186Thermosipho africanus TCF52B, complete genomeribosomal protein L302e-0754.7
NC_016627:4490435:449395144939514494130180Clostridium clariflavum DSM 19732 chromosome, complete genome50S ribosomal protein L302e-0754.3
NC_017095:1429298:144196714419671442152186Fervidobacterium pennivorans DSM 9078 chromosome, complete genome50S ribosomal protein L303e-0754.3
NC_009718:1207360:121538912153891215574186Fervidobacterium nodosum Rt17-B1, complete genomeribosomal protein L303e-0753.9
NC_014484:591291:597753597753597950198Spirochaeta thermophila DSM 6192 chromosome, complete genome50S ribosomal protein L303e-0753.9
NC_007503:2063451:206516320651632065345183Carboxydothermus hydrogenoformans Z-2901, complete genomeribosomal protein L303e-0753.9
NC_013173:3132517:314383731438373144007171Desulfomicrobium baculatum DSM 4028, complete genomeribosomal protein L303e-0753.9
NC_009616:979861:996836996836997021186Thermosipho melanesiensis BI429 chromosome, complete genome50S ribosomal protein L303e-0753.9
NC_012968:381771:383938383938384135198Methylotenera mobilis JLW8, complete genomeribosomal protein L303e-0753.9
NC_009633:4563877:456940445694044569583180Alkaliphilus metalliredigens QYMF chromosome, complete genome50S ribosomal protein L304e-0753.5
NC_020995:245671:261196261196261375180Enterococcus casseliflavus EC20, complete genome50S ribosomal protein L304e-0753.5
NC_013406:6422000:642382164238216424006186Paenibacillus sp. Y412MC10 chromosome, complete genome50S ribosomal protein L304e-0753.5
NC_015581:128350:140281140281140469189Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome50S ribosomal protein L304e-0753.5
NC_008555:2597980:260315126031512603330180Listeria welshimeri serovar 6b str. SLCC5334, complete genomeribosomal protein L305e-0753.1
NC_010376:186510:187967187967188149183Finegoldia magna ATCC 29328, complete genome50S ribosomal protein L305e-0753.1
NC_015759:536929:545920545920546105186Weissella koreensis KACC 15510 chromosome, complete genome50S ribosomal protein L306e-0752.8
NC_011059:2233993:223971322397132239901189Prosthecochloris aestuarii DSM 271, complete genomeribosomal protein L306e-0752.8
NC_015555:327562:361380361380361565186Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeribosomal protein L308e-0752.4
NC_015703:1898159:191149619114961911675180Runella slithyformis DSM 19594 chromosome, complete genome50S ribosomal protein L308e-0752.4
NC_016109:3525588:355276935527693552951183Kitasatospora setae KM-6054, complete genome50S ribosomal protein L309e-0752.4
NC_008639:2786447:278968127896812789866186Chlorobium phaeobacteroides DSM 266, complete genomeribosomal protein L309e-0752.4
NC_016609:5802000:580695458069545807136183Niastella koreensis GR20-10 chromosome, complete genome50S ribosomal protein L301e-0652
NC_014315:2327083:233814823381482338342195Nitrosococcus watsoni C-113 chromosome, complete genome50S ribosomal protein L301e-0652
NC_018748:181937:184945184945185124180Emticicia oligotrophica DSM 17448 chromosome, complete genomeribosomal protein L301e-0652
NC_017098:652681:667787667787667981195Spirochaeta africana DSM 8902 chromosome, complete genome50S ribosomal protein L301e-0652
NC_007947:290864:296383296383296580198Methylobacillus flagellatus KT, complete genomeribosomal protein L301e-0651.6
NC_015707:705628:721936721936722127192Thermotoga thermarum DSM 5069 chromosome, complete genome50S ribosomal protein L30P2e-0651.6
NC_014328:4387303:443721544372154437400186Clostridium ljungdahlii ATCC 49587 chromosome, complete genome50S ribosomal protein L302e-0651.6
NC_010831:2448070:245804424580442458229186Chlorobium phaeobacteroides BS1, complete genomeribosomal protein L302e-0651.2
NC_008513:343540:360480360480360653174Buchnera aphidicola str. Cc (Cinara cedri), complete genome50S ribosomal subunit protein L302e-0651.2
NC_014410:403776:437569437569437754186Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,ribosomal protein L302e-0651.2
NC_013656:2382000:238546023854602385639180Lactococcus lactis subsp. lactis KF147, complete genome50S ribosomal protein L30P2e-0651.2
NC_002937:1395977:140143814014381401608171Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeribosomal protein L302e-0651.2
NC_016114:2960989:297177429717742971956183Streptomyces flavogriseus ATCC 33331 chromosome, complete genome50S ribosomal protein L303e-0650.8
NC_015953:4385419:441432144143214414503183Streptomyces sp. SirexAA-E chromosome, complete genome50S ribosomal protein L303e-0650.8
NC_010572:3314500:332550933255093325691183Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative 50S ribosomal protein L303e-0650.8
NC_014171:109280:136363136363136545183Bacillus thuringiensis BMB171 chromosome, complete genome50S ribosomal protein L303e-0650.8
NC_011026:1284966:130329813032981303498201Chloroherpeton thalassium ATCC 35110, complete genomeribosomal protein L303e-0650.8
NC_015391:2523451:254006625400662540245180Carnobacterium sp. 17-4 chromosome, complete genome50S ribosomal protein L304e-0650.4
NC_007759:291368:322111322111322305195Syntrophus aciditrophicus SB, complete genomeLSU ribosomal protein L30P4e-0650.1
NC_014759:3572500:360005836000583600240183Marivirga tractuosa DSM 4126 chromosome, complete genomeLSU ribosomal protein l30p4e-0650.1
NC_016111:3865823:388186838818683882050183Streptomyces cattleya NRRL 8057, complete genome50S ribosomal protein L304e-0650.1
NC_008576:1061171:106382410638241064003180Magnetococcus sp. MC-1, complete genomeribosomal protein L305e-0650.1
NC_010803:2444120:244820224482022448387186Chlorobium limicola DSM 245, complete genomeribosomal protein L306e-0649.7
NC_016052:2274427:227826822782682278447180Tetragenococcus halophilus NBRC 12172, complete genome50S ribosomal protein L306e-0649.7
NC_010723:223935:259955259955260134180Clostridium botulinum E3 str. Alaska E43, complete genomeribosomal protein L306e-0649.7
NC_010674:222016:258049258049258228180Clostridium botulinum B str. Eklund 17B, complete genomeribosomal protein L306e-0649.7
NC_019970:336472:392688392688392873186Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeribosomal protein L30, bacterial/organelle6e-0649.7
NC_014218:1485568:150898615089861509168183Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeribosomal protein L305e-0649.7
NC_019904:243465:250649250649250828180Echinicola vietnamensis DSM 17526 chromosome, complete genome50S ribosomal protein L305e-0649.7
NC_013159:403918:407481407481407663183Saccharomonospora viridis DSM 43017, complete genomeLSU ribosomal protein L30P7e-0649.3
NC_013194:3984377:399475939947593994941183Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeribosomal protein L307e-0649.3
NC_017208:108134:138413138413138595183Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete50S ribosomal protein L307e-0649.3
NC_013223:2337049:234487723448772345059183Desulfohalobium retbaense DSM 5692, complete genomeribosomal protein L308e-0649.3