Pre_GI: BLASTP Hits

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Query: NC_009664:570768:573756 Kineococcus radiotolerans SRS30216, complete genome

Start: 573756, End: 575507, Length: 1752

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007333:1743890:1788670178867017905261857Thermobifida fusca YX, complete genomePAS:Protein phosphatase 2C-like:GAF5e-46186
NC_017955:3731480:3749996374999637517651770Modestobacter marinus, complete genomehypothetical protein9e-26119
NC_013757:1438812:1469969146996914722812313Geodermatophilus obscurus DSM 43160, complete genomeputative PAS/PAC sensor protein2e-23110
NC_017955:3670670:3685066368506636871922127Modestobacter marinus, complete genometwo-component PAS/PAC sensor protein6e-22106
NC_017955:3731480:3784366378436637865642199Modestobacter marinus, complete genomehypothetical protein1e-21105
NC_016943:2054688:2071109207110920728781770Blastococcus saxobsidens DD2, complete genomeSerine phosphatase RsbU, regulator of sigma subunit6e-21102
NC_017955:3057592:3078117307811730796641548Modestobacter marinus, complete genomePAS/PAC sensor protein3e-1790.5
NC_016109:5290000:5314849531484953173112463Kitasatospora setae KM-6054, complete genomeputative protein kinase/phosphatase7e-1789.4
NC_015953:5444572:5460375546037554629992625Streptomyces sp. SirexAA-E chromosome, complete genomeputative PAS/PAC sensor protein9e-1789
NC_016109:5290000:5311921531192153146922772Kitasatospora setae KM-6054, complete genomeputative protein kinase/phosphatase1e-1689
NC_016582:10015558:1002419110024191100262512061Streptomyces bingchenggensis BCW-1 chromosome, complete genomemagnesium or manganese-dependent protein phosphatase3e-1687.4
NC_013510:1849751:1868469186846918705502082Thermomonospora curvata DSM 43183, complete genomeputative PAS/PAC sensor protein3e-1687.4
NC_015671:3211972:3231317323131732335992283Cellvibrio gilvus ATCC 13127 chromosome, complete genomeputative PAS/PAC sensor protein6e-1686.3
NC_018750:5828000:5841875584187558445202646Streptomyces venezuelae ATCC 10712, complete genomeregulatory protein9e-1685.9
NC_010572:4024810:4037560403756040392991740Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein9e-1685.5
NC_003155:921494:9359539359539387272775Streptomyces avermitilis MA-4680, complete genomemagnesium or manganese-dependent protein phosphatase8e-1582.4
NC_021177:3867439:3867439386743938691661728Streptomyces fulvissimus DSM 40593, complete genomeMagnesium or manganese-dependent protein phosphatase8e-1582.4
NC_016582:7033000:7033222703322270352732052Streptomyces bingchenggensis BCW-1 chromosome, complete genomemagnesium or manganese-dependent protein phosphatase3e-1480.5
NC_010572:4585500:4587521458752145893051785Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-1480.5
NC_003888:4523500:4526332452633245279901659Streptomyces coelicolor A3(2), complete genomehypothetical protein4e-1480.1
NC_015957:115133:1151331151331177992667Streptomyces violaceusniger Tu 4113 chromosome, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism5e-1480.1
NC_013595:8338619:8338619833861983417743156Streptosporangium roseum DSM 43021, complete genomeSignal transduction histidine kinase-like protein3e-1377.4
NC_013510:3065000:3084646308464630867122067Thermomonospora curvata DSM 43183, complete genomeprotein serine phosphatase with GAF(s) sensor(s)4e-1377
NC_016582:1639375:1662621166262116654342814Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative regulatory protein phosphatase7e-1272.8
NC_021177:7870464:7884763788476378889084146Streptomyces fulvissimus DSM 40593, complete genomePAS/PAC sensor hybrid histidine kinase1e-1172
NC_019673:6394319:6454744645474464562671524Saccharothrix espanaensis DSM 44229 complete genomeResponse regulator receiver modulated serine phosphatase8e-1169.3
NC_008148:1711679:1713663171366317147961134Rubrobacter xylanophilus DSM 9941, complete genomeputative PAS/PAC sensor protein8e-1169.3
NC_010814:2217153:2238961223896122422093249Geobacter lovleyi SZ, complete genomeputative phytochrome sensor protein1e-1068.9
NC_013510:5394432:5415681541568154194273747Thermomonospora curvata DSM 43183, complete genomemulti-sensor hybrid histidine kinase1e-1068.6
NC_013510:5394432:5411450541145054156014152Thermomonospora curvata DSM 43183, complete genomemulti-sensor signal transduction histidine kinase8e-1065.9
NC_010682:288415:2998662998663035313666Ralstonia pickettii 12J chromosome 1, complete sequencediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)1e-0965.5
NC_013939:1688400:1701781170178117049903210Deferribacter desulfuricans SSM1, complete genomeserine phosphatase1e-0965.1
NC_015953:2603526:2606636260663626089152280Streptomyces sp. SirexAA-E chromosome, complete genomeputative PAS/PAC sensor protein2e-0964.7
NC_016751:1700164:1703150170315017045621413Marinitoga piezophila KA3 chromosome, complete genomeserine phosphatase RsbU, regulator of sigma subunit6e-0962.8
NC_018750:3859127:3872413387241338745302118Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-0862
NC_003888:8569962:8581406858140685831091704Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-0861.2
NC_018750:3661243:3676167367616736773661200Streptomyces venezuelae ATCC 10712, complete genomeSerine phosphatase RsbU, regulator of sigma subunit4e-0860.5
NC_010572:188500:1921121921121935001389Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein4e-0860.1
NC_004193:375416:6539466539466549591014Oceanobacillus iheyensis HTE831, complete genomeindirect positive regulator of sigma-B activity1e-0758.9
NC_014165:2081914:210025221002522101181930Thermobispora bispora DSM 43833 chromosome, complete genomeprotein serine/threonine phosphatase1e-0758.5
NC_008011:1394777:1409027140902714110302004Lawsonia intracellularis PHE/MN1-00, complete genomeputative regulator6e-0756.6
NC_015957:690817:7096307096307108351206Streptomyces violaceusniger Tu 4113 chromosome, complete genomeprotein serine/threonine phosphatase6e-0756.6
NC_009921:6483660:6510476651047665117141239Frankia sp. EAN1pec, complete genomeprotein serine/threonine phosphatase1e-0655.5
NC_012108:904260:9267529267529284521701Desulfobacterium autotrophicum HRM2, complete genomeRsbP1e-0655.1
NC_013739:5705325:5737786573778657389641179Conexibacter woesei DSM 14684, complete genomeresponse regulator receiver modulated serine phosphatase2e-0654.7
NC_003155:4906639:4930332493033249317801449Streptomyces avermitilis MA-4680, complete genomemagnesium or manganese-dependent protein phosphatase2e-0654.3
NC_015410:617020:6376766376766396071932Pseudomonas mendocina NK-01 chromosome, complete genometranscriptional regulatory protein8e-0652.8