Pre_GI: BLASTP Hits

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Query: NC_009480:703102:720800 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 720800, End: 721792, Length: 993

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:188500:207370207370208281912Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative integral membrane protein6e-24111
NC_009142:4046376:4050099405009940511361038Saccharopolyspora erythraea NRRL 2338, complete genometransporter, EamA family8e-24111
NC_014830:1871135:189721918972191898109891Intrasporangium calvum DSM 43043 chromosome, complete genomeprotein of unknown function DUF6 transmembrane5e-2098.6
NC_014215:1243125:125724512572451258120876Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Permeases of the drug/metabolite transporter (DMT) superfamily1e-1687.8
NC_014013:112008:115305115305116192888Sphingobium japonicum UT26S chromosome 2, complete genomeEamA family transporter3e-1479.3
NC_011892:306437:314029314029314946918Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeprotein of unknown function DUF6 transmembrane8e-1478.2
NC_013364:928486:929288929288930175888Escherichia coli O111:H- str. 11128, complete genomethreonine and homoserine efflux system protein RhtA1e-1377.4
NC_013353:922937:923739923739924626888Escherichia coli O103:H2 str. 12009, complete genomethreonine and homoserine efflux system protein RhtA1e-1377.4
AP010958:922937:923739923739924626888Escherichia coli O103:H2 str. 12009 DNA, complete genomethreonine and homoserine efflux system protein RhtA1e-1377.4
NC_015381:1318818:133929313392931340189897Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein6e-1272
NC_015957:5310000:532314353231435323991849Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein6e-1272
NC_013421:3117639:313558331355833136464882Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF6 transmembrane7e-1271.6
NC_017047:1434500:145211714521171453103987Rahnella aquatilis HX2 chromosome, complete genomethreonine and homoserine efflux system7e-1168.6
NC_015061:1481500:149917414991741500160987Rahnella sp. Y9602 chromosome, complete genomehypothetical protein7e-1168.6
NC_017265:1571305:157482515748251575712888Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,threonine and homoserine efflux system1e-1067.4
NC_010634:2894631:292871929287192929606888Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-1067
NC_004088:1851500:185374418537441854631888Yersinia pestis KIM, complete genometransmembrane subunit2e-1067
NC_003143:2804500:281753928175392818426888Yersinia pestis CO92, complete genomehypothetical protein2e-1067
NC_017154:2804000:281701828170182817899882Yersinia pestis D106004 chromosome, complete genomeintegral membrane protein2e-1067
NC_010159:1818500:183158318315831832464882Yersinia pestis Angola, complete genomeintegral membrane protein2e-1067
NC_006155:2979500:301077730107773011664888Yersinia pseudotuberculosis IP 32953, complete genomeputative DMT superfamily metabolite efflux protein2e-1067
NC_008149:2366500:237932323793232380210888Yersinia pestis Nepal516, complete genomemembrane protein2e-1067
NC_005810:2549680:258359325835932584480888Yersinia pestis biovar Microtus str. 91001, complete genomethreonine and homoserine efflux system2e-1067
NC_009381:2138625:216974721697472170634888Yersinia pestis Pestoides F chromosome, complete genomethreonine and homoserine efflux system2e-1067
NC_009708:1735903:174142617414261742313888Yersinia pseudotuberculosis IP 31758 chromosome, complete genomethreonine and homoserine efflux system2e-1067
NC_014029:2756500:276986227698622770749888Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-1067
NC_017160:2787637:279115627911562792043888Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-1067
NC_017168:2941938:294401029440102944897888Yersinia pestis A1122 chromosome, complete genomethreonine and homoserine efflux system2e-1067
NC_015563:4414854:443042444304244431326903Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein2e-1066.6
NC_012917:1840172:184017218401721841059888Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein3e-1066.2