Pre_GI: BLASTP Hits

Some Help

Query: NC_009092:521519:543518 Shewanella loihica PV-4, complete genome

Start: 543518, End: 544534, Length: 1017

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002937:1706000:1723708172370817248231116Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completepermease, putative1e-87323
NC_008751:1736512:1743434174343417445491116Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomepermease2e-87323
NC_017059:2771085:279943327994332800398966Rhodospirillum photometricum DSM 122, complete genomePermease3e-69262
NC_007519:2773000:2779428277942827805191092Desulfovibrio alaskensis G20 chromosome, complete genomepermease-like protein3e-65248
NC_014910:2779573:2792730279273027937851056Alicycliphilus denitrificans BC chromosome, complete genomepermease1e-58226
NC_010730:952574:970233970233971192960Sulfurihydrogenibium sp. YO3AOP1, complete genomepermease3e-55215
NC_008781:2981868:2986274298627429873201047Polaromonas naphthalenivorans CJ2, complete genomepermease8e-55214
NC_017192:276187:299253299253300215963Arcobacter sp. L, complete genomehypothetical protein4e-54212
NC_018012:1789028:1802946180294618039921047Thiocystis violascens DSM 198 chromosome, complete genomeputative permease4e-54212
NC_014972:1407632:1416751141675114178451095Desulfobulbus propionicus DSM 2032 chromosome, complete genomepermease3e-54212
NC_014151:4021394:4043941404394140449901050Cellulomonas flavigena DSM 20109 chromosome, complete genomepermease5e-54211
NC_009714:292470:303208303208304203996Campylobacter hominis ATCC BAA-381, complete genomepermease7e-51201
NC_011830:1288984:1316848131684813178521005Desulfitobacterium hafniense DCB-2, complete genomepermease6e-50197
NC_014218:1689002:1689002168900216901801179Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomepermease6e-50197
NC_007907:5297477:5309204530920453102081005Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-49194
NC_018604:1137797:1156011115601111570151005Brachyspira pilosicoli WesB complete genomeputative permease2e-46186
NC_014330:313813:3138133138133148171005Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative permease2e-46186
NC_010816:1274702:1283050128305012840631014Bifidobacterium longum DJO10A, complete genomeHypothetical permease3e-46185
NC_018607:1648607:1650167165016716511711005Brachyspira pilosicoli B2904 chromosome, complete genomepermease6e-46184
NC_015417:39633:479664796648928963Clostridium botulinum BKT015925 plasmid p1BKT015925, completepermease3e-45182
NC_014376:2964731:2972321297232129733341014Clostridium saccharolyticum WM1 chromosome, complete genomepermease5e-44178
NC_009975:688667:688667688667689623957Methanococcus maripaludis C6, complete genomepermease5e-38158
NC_015152:1230995:1246285124628512472891005Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein2e-36153
NC_011979:3880488:388504938850493885729681Geobacter sp. FRC-32, complete genome9e-36150
NC_019962:1909103:196271919627191963675957Natrinema pellirubrum DSM 15624, complete genomeputative permease5e-30132
NC_002163:1471517:149032814903281491152825Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehypothetical protein1e-24114
CU928145:3983432:4015995401599540170201026Escherichia coli 55989 chromosome, complete genomeputative membrane protein2e-24113
NC_011748:3983432:4015995401599540170201026Escherichia coli 55989, complete genomehypothetical protein2e-24113
NC_011415:3887997:3896056389605638970571002Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-24113
NC_013361:4566779:4571679457167945726801002Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-24113
CU928160:3709081:3714883371488337158961014Escherichia coli IAI1 chromosome, complete genomeputative membrane protein2e-24113
NC_011741:3709081:3714883371488337158961014Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-24113
CP002185:3822470:3846689384668938476901002Escherichia coli W, complete genomeconserved hypothetical protein2e-24113
NC_016902:246767:2583832583832593841002Escherichia coli KO11FL chromosome, complete genomepermease2e-24113
NC_013353:4313462:4318121431812143191221002Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-24113
AP010958:4313462:4318121431812143191221002Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein2e-24113
CP002516:246767:2583832583832593841002Escherichia coli KO11, complete genomepermease2e-24113
NC_009801:3956917:3962721396272139637221002Escherichia coli E24377A, complete genomeputative permease2e-24113
NC_010498:3838419:3862537386253738635381002Escherichia coli SMS-3-5, complete genomeputative permease6e-24111
NC_017328:3655876:366286236628623663824963Shigella flexneri 2002017 chromosome, complete genomeputative membrane transport protein9e-24111
NC_008258:3581583:358826735882673589229963Shigella flexneri 5 str. 8401, complete genomehypothetical protein1e-23110
NC_013364:4306000:430912843091284310090963Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-23110
NC_004337:3590323:362801236280123628968957Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-23110
NC_004337:3621985:362801236280123628968957Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-23110
NC_004741:4132056:414488041448804145836957Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-23110
NC_017281:1533454:153345415334541534401948Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomemembrane protein2e-23109
NC_003912:1629937:162993716299371630884948Campylobacter jejuni RM1221, complete genomepermease, putative2e-23109
NC_007907:5185510:5229711522971152307421032Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-2098.6
NC_008554:4699577:471204947120494712951903Syntrophobacter fumaroxidans MPOB, complete genomepermease5e-1995.5
NC_006510:591339:615873615873616415543Geobacillus kaustophilus HTA426, complete genomehypothetical protein9e-1581.3
NC_010520:3526883:3538028353802835391191092Clostridium botulinum A3 str. Loch Maree, complete genomeputative permease2e-1273.6
NC_016822:3946500:395189639518963952567672Shigella sonnei 53G, complete genomehypothetical protein2e-1273.2
NC_007384:3741708:375668937566893757366678Shigella sonnei Ss046, complete genomehypothetical protein3e-1273.2
NC_008554:4781500:4799624479962448007151092Syntrophobacter fumaroxidans MPOB, complete genomepermease4e-1272.8
NC_016593:596500:622962622962623372411Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein4e-1272.4
NC_018866:108812:1320021320021331171116Dehalobacter sp. DCA chromosome, complete genomeTransporter4e-1272.4
NC_018867:179975:1995971995972007121116Dehalobacter sp. CF chromosome, complete genomeTransporter4e-1272.4
NC_008787:1463696:146524714652471465888642Campylobacter jejuni subsp. jejuni 81-176, complete genomehypothetical protein4e-1272.4
NC_007722:2172000:218398921839892184381393Erythrobacter litoralis HTCC2594, complete genomeputative permease1e-1171.2
NC_014972:1407632:1435174143517414362711098Desulfobulbus propionicus DSM 2032 chromosome, complete genomepermease2e-1170.5
NC_017179:2539031:2572119257211925732041086Clostridium difficile BI1, complete genomepermease5e-1168.9
NC_013315:2531019:2564107256410725651921086Clostridium difficile CD196 chromosome, complete genomepermease5e-1168.9
NC_015850:548821:570653570653571606954Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein7e-1065.1
NC_017297:3546467:355345835534583553997540Clostridium botulinum F str. 230613 chromosome, complete genome1e-0757.8
NC_020995:2636519:265148326514832652430948Enterococcus casseliflavus EC20, complete genomeABC transporter membrane protein2e-0653.5