Pre_GI: BLASTP Hits

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Query: NC_009092:1874888:1901344 Shewanella loihica PV-4, complete genome

Start: 1901344, End: 1902051, Length: 708

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:2755338:275967427596742760390717Edwardsiella ictaluri 93-146, complete genomesuccinate dehydrogenase iron-sulfur subunit2e-113407
NC_017265:1136000:115726511572651157981717Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,succinate dehydrogenase, FeS subunit3e-109394
NC_017168:4155143:417795141779514178667717Yersinia pestis A1122 chromosome, complete genomesuccinate dehydrogenase iron-sulfur subunit3e-109394
NC_017154:1225500:124722512472251247941717Yersinia pestis D106004 chromosome, complete genomesuccinate dehydrogenase catalytic subunit3e-109394
NC_014029:1283500:130513213051321305848717Yersinia pestis Z176003 chromosome, complete genomesuccinate dehydrogenase catalytic subunit3e-109394
NC_010159:1417993:144008714400871440803717Yersinia pestis Angola, complete genomesuccinate dehydrogenase, iron-sulfur protein3e-109394
NC_008150:650899:672671672671673387717Yersinia pestis Antiqua, complete genomesuccinate dehydrogenase iron-sulfur protein3e-109394
NC_003143:1233128:125593512559351256651717Yersinia pestis CO92, complete genomesuccinate dehydrogenase catalytic subunit3e-109394
NC_003198:751779:775282775282776001720Salmonella enterica subsp. enterica serovar Typhi str. CT18,succinate dehydrogenase catalytic subunit3e-106384
NC_016832:2201860:220186022018602202579720Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Succinate dehydrogenase, Fe-S protein3e-106384
NC_016860:816000:839335839335840051717Salmonella enterica subsp. enterica serovar Typhimurium strsuccinate dehydrogenase iron-sulfur subunit6e-106383
NC_011080:780850:805113805113805832720Salmonella enterica subsp. enterica serovar Newport str. SL254,succinate dehydrogenase iron-sulfur subunit7e-106382
NC_011083:824659:848911848911849630720Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,succinate dehydrogenase iron-sulfur subunit7e-106382
NC_003197:776238:800502800502801221720Salmonella typhimurium LT2, complete genomesuccinate dehydrogenase catalytic subunit7e-106382
NC_010102:2322866:232286623228662323585720Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-106382
NC_011094:842038:866251866251866970720Salmonella enterica subsp. enterica serovar Schwarzengrund strsuccinate dehydrogenase iron-sulfur subunit7e-106382
NC_016810:775649:799913799913800632720Salmonella enterica subsp. enterica serovar Typhimurium strsuccinate dehydrogenase iron-sulfur protein7e-106382
NC_016856:776735:800999800999801718720Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssuccinate dehydrogenase iron-sulfur subunit7e-106382
NC_016857:775649:799913799913800632720Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74succinate dehydrogenase iron-sulfur subunit7e-106382
NC_016863:776734:800998800998801717720Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1succinate dehydrogenase iron-sulfur subunit7e-106382
NC_017046:775636:799899799899800618720Salmonella enterica subsp. enterica serovar Typhimurium str. 798succinate dehydrogenase iron-sulfur protein7e-106382
NC_009656:3817261:382462338246233825330708Pseudomonas aeruginosa PA7 chromosome, complete genomesuccinate dehydrogenase iron-sulfur subunit2e-98358
NC_009434:2006500:202209220220922022796705Pseudomonas stutzeri A1501, complete genomesuccinate dehydrogenase iron-sulfur subunit5e-98357
NC_015740:1845370:185972118597211860425705Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completesuccinate dehydrogenase iron-sulfur subunit1e-97355
NC_008601:1733940:174831317483131749014702Francisella tularensis subsp. novicida U112, complete genomesuccinate dehydrogenase iron-sulfur protein7e-96350
NC_016937:66854:764747647477175702Francisella tularensis subsp. tularensis TI0902 chromosome,Succinate dehydrogenase iron-sulfur protein2e-95348
NC_016933:66854:764747647477175702Francisella tularensis TIGB03 chromosome, complete genomeSuccinate dehydrogenase iron-sulfur protein2e-95348
NC_009257:151737:161357161357162058702Francisella tularensis subsp. tularensis WY96-3418 chromosome,succinate dehydrogenase iron-sulfur subunit2e-95348
NC_008245:66852:764727647277173702Francisella tularensis subsp. tularensis FSC 198, complete genomesuccinate dehydrogenase iron-sulfur protein2e-95348
NC_006570:24636:764567645677157702Francisella tularensis subsp. tularensis Schu 4, complete genomesuccinate dehydrogenase catalytic subunit2e-95348
NC_009749:1699152:171357317135731714274702Francisella tularensis subsp. holarctica FTA, complete genomesuccinate dehydrogenase iron-sulfur protein4e-95347
NC_007880:1703346:171767417176741718375702Francisella tularensis subsp. holarctica, complete genomesuccinate dehydrogenase iron-sulfur protein4e-95347
NC_008369:1702885:171730617173061718007702Francisella tularensis subsp. holarctica OSU18, complete genomesuccinate dehydrogenase4e-95347
NC_010336:996661:104860510486051049306702Francisella philomiragia subsp. philomiragia ATCC 25017, completeSuccinate dehydrogenase (ubiquinone)1e-94345
NC_005085:1096000:111436711143671115077711Chromobacterium violaceum ATCC 12472, complete genomesuccinate dehydrogenase catalytic subunit3e-94344
NC_015696:517941:570053570053570754702Francisella sp. TX077308 chromosome, complete genomesuccinate dehydrogenase iron-sulfur protein5e-94343
NC_010678:642769:662624662624663325702Ralstonia pickettii 12J chromosome 2, complete sequencesuccinate dehydrogenase and fumarate reductase iron-sulfur protein8e-91333
NC_015563:4773415:478424047842404784944705Delftia sp. Cs1-4 chromosome, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein2e-89328
NC_007650:420745:435827435827436534708Burkholderia thailandensis E264 chromosome II, complete sequencesuccinate dehydrogenase, iron-sulfur protein1e-88325
NC_010801:421906:444915444915445622708Burkholderia multivorans ATCC 17616 chromosome 3, completesuccinate dehydrogenase iron-sulfur protein4e-87320
NC_010087:460591:479236479236479943708Burkholderia multivorans ATCC 17616 chromosome 3, completesuccinate dehydrogenase and fumarate reductase iron-sulfur protein4e-87320
NC_014910:2015627:202559520255952026299705Alicycliphilus denitrificans BC chromosome, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein3e-86318
NC_012559:2309566:230956623095662310525960Laribacter hongkongensis HLHK9, complete genomeSdhB4e-86317
NC_013861:728648:750866750866751564699Legionella longbeachae NSW150, complete genomesuccinate dehydrogenase, iron sulfur protein7e-85313
NC_011662:131956:151537151537152232696Thauera sp. MZ1T, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein2e-82305
NC_002696:3759551:377425737742573775039783Caulobacter crescentus CB15, complete genomesuccinate dehydrogenase catalytic subunit7e-76283
NC_014100:172452:176693176693177475783Caulobacter segnis ATCC 21756 chromosome, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein2e-75282
NC_005295:1146500:115565011556501156426777Ehrlichia ruminantium str. Welgevonden, complete genomesuccinate dehydrogenase catalytic subunit1e-71269
NC_006831:1112000:112374411237441124538795Ehrlichia ruminantium str. Gardel, complete genomesuccinate dehydrogenase catalytic subunit2e-71268
NC_006832:1125000:113424911342491135043795Ehrlichia ruminantium str. Welgevonden, complete genomesuccinate dehydrogenase catalytic subunit2e-71268
NC_007799:284058:304044304044304820777Ehrlichia chaffeensis str. Arkansas, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein2e-70265
NC_015380:412277:425572425572426345774Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomesuccinate dehydrogenase iron-sulfur protein3e-69261
NC_009883:1492425:149568114956811496466786Rickettsia bellii OSU 85-389, complete genomesuccinate dehydrogenase iron-sulfur subunit3e-69261
NC_007940:1485006:148826214882621489047786Rickettsia bellii RML369-C, complete genomeSuccinate dehydrogenase iron-sulfur protein3e-69261
NC_019907:819165:834613834613835392780Liberibacter crescens BT-1 chromosome, complete genomeSuccinate dehydrogenase iron-sulfur protein2e-68258
NC_012808:3972983:397360039736003974424825Methylobacterium extorquens AM1, complete genomesuccinate dehydrogenase, iron-sulfur subunit9e-68256
NC_018643:1:131811318113960780Alpha proteobacterium HIMB5 chromosome, complete genomesuccinate dehydrogenase subunit B7e-67253
NC_014774:671695:680254680254681033780Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completesuccinate dehydrogenase iron-sulfur subunit1e-66252
NC_015672:699904:716785716785717495711Flexistipes sinusarabici DSM 4947 chromosome, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein4e-60231
NC_014221:398636:404916404916405641726Truepera radiovictrix DSM 17093 chromosome, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein2e-52205
NC_014550:786692:799879799879800661783Arthrobacter arilaitensis Re117, complete genomesuccinate dehydrogenase iron-sulfur subunit6e-50197
NC_015499:197945:204797204797205507711Thermodesulfobium narugense DSM 14796 chromosome, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein2e-49195
NC_012526:1502975:151533515153351516096762Deinococcus deserti VCD115, complete genomeputative Succinate dehydrogenase, iron-sulfur protein2e-47189
NC_020133:1443934:145844914584491459261813Mycobacterium liflandii 128FXT, complete genomesuccinate dehydrogenase iron sulfur subunit9e-47186
NC_012115:961883:968018968018968986969Nautilia profundicola AmH, complete genomesuccinate dehydrogenase/fumarate reductase iron-sulfur protein2e-42172
NC_012731:403670:425373425373426107735Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomefumarate reductase iron-sulfur subunit2e-38159
NC_013850:4993307:499330749933074994041735Klebsiella variicola At-22 chromosome, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein2e-38159
NC_009648:4958500:498024349802434980977735Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomefumarate reductase iron-sulfur subunit2e-38159
NC_015663:1934863:195206519520651952799735Enterobacter aerogenes KCTC 2190 chromosome, complete genomefumarate reductase iron-sulfur subunit2e-38159
NC_016845:411844:433877433877434611735Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,fumarate reductase iron-sulfur subunit2e-38158
NC_012691:2614603:272398127239812724721741Tolumonas auensis DSM 9187, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein2e-38158
NC_020181:3518396:351839635183963519130735Enterobacter aerogenes EA1509E, complete genomeSuccinate dehydrogenase iron-sulfur protein5e-38157
NC_016612:1840325:186196418619641862698735Klebsiella oxytoca KCTC 1686 chromosome, complete genomefumarate reductase iron-sulfur subunit2e-37155
NC_016070:743255:749298749298750011714Thermoproteus tenax Kra 1, complete genomesuccinate dehydrogenase/fumarate reductase iron-sulfur subunit6e-36150
NC_016645:1838405:184553918455391846249711Pyrobaculum sp. 1860 chromosome, complete genomesuccinate dehydrogenase iron-sulfur subunit1e-35149
NC_015948:1636491:165248616524861653373888Haloarcula hispanica ATCC 33960 chromosome chromosome I, completesuccinate dehydrogenase subunit B (iron-sulfur protein)2e-35149
NC_016885:2091918:217327321732732173986714Pyrobaculum oguniense TE7 chromosome, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein3e-35148
NC_009376:2102536:211160021116002112313714Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomesuccinate dehydrogenase iron-sulfur subunit6e-35147
NC_015518:222000:242023242023242724702Acidianus hospitalis W1 chromosome, complete genomesuccinate dehydrogenase subunit B9e-35146
NC_014729:1185294:118529411852941186172879Halogeometricum borinquense DSM 11551 chromosome, complete genomesuccinate dehydrogenase subunit b3e-34145
NC_013769:123958:137302137302138252951Sulfolobus islandicus L.D.8.5 chromosome, complete genomesuccinate dehydrogenase or fumarate reductase iron-sulfur protein4e-31134
NC_014541:475350:504487504487505221735Ferrimonas balearica DSM 9799 chromosome, complete genomesuccinate dehydrogenase subunit B2e-27122
NC_007517:344237:3492243492243502581035Geobacter metallireducens GS-15, complete genomeSuccinate dehydrogenase/fumarate reductase iron-sulfur protein3e-26118
NC_012792:310443:324202324202324936735Variovorax paradoxus S110 chromosome 2, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein5e-25114
NC_009454:1042592:104444810444481045197750Pelotomaculum thermopropionicum SI, complete genomefumarate reductase iron-sulfur subunit1e-24113
NC_021171:4367834:438771443877144388670957Bacillus sp. 1NLA3E, complete genomesuccinate dehydrogenase1e-23110
NC_013894:1288282:130656813065681307272705Thermocrinis albus DSM 14484 chromosome, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein4e-23108
NC_015565:1511426:151252515125251513253729Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completesuccinate dehydrogenase and fumarate reductase iron-sulfur protein2e-22105
NC_017280:387760:406418406418407383966Campylobacter jejuni subsp. jejuni M1 chromosome, complete genomesuccinate dehydrogenase iron-sulfur protein4e-21101
NC_008787:390215:408860408860409825966Campylobacter jejuni subsp. jejuni 81-176, complete genomesuccinate dehydrogenase, iron-sulfur protein subunit4e-21101
NC_014802:392852:411522411522412487966Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completesuccinate dehydrogenase, iron-sulfur protein subunit4e-21101
NC_017279:393255:411815411815412780966Campylobacter jejuni subsp. jejuni IA3902 chromosome, completesuccinate dehydrogenase, iron-sulfur protein subunit4e-21101
NC_017281:388610:407311407311408276966Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomeSuccinate dehydrogenase iron-sulfur protein4e-21101
NC_003912:426676:445342445342446307966Campylobacter jejuni RM1221, complete genomesuccinate dehydrogenase, iron-sulfur protein subunit4e-21101
NC_005090:1812833:181467418146741815633960Wolinella succinogenes DSM 1740, complete genomeSUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN6e-21100
NC_002163:388595:407165407165408130966Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeputative succinate dehydrogenase iron-sulfur protein1e-2099.8
NC_012438:565419:566480566480567190711Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomefumarate reductase iron-sulfur subunit1e-2099.8
NC_000909:67729:8661386613880821470Methanocaldococcus jannaschii DSM 2661, complete genomesuccinate dehydrogenase2e-2099
NC_014165:3559305:357468435746843575439756Thermobispora bispora DSM 43833 chromosome, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein5e-1891.3
NC_016582:5227461:525081552508155251585771Streptomyces bingchenggensis BCW-1 chromosome, complete genomefumarate reductase iron-sulfur subunit6e-1890.9
NC_018750:5114434:511366451136645114437774Streptomyces venezuelae ATCC 10712, complete genomeSuccinate dehydrogenase iron-sulfur protein5e-1787.8
NC_018581:3323500:334132333413233342069747Gordonia sp. KTR9 chromosome, complete genomeSuccinate dehydrogenase / fumarate reductase, Fe-S protein subunit5e-1684.7
NC_013929:3564500:358467335846733585449777Streptomyces scabiei 87.22 chromosome, complete genomesuccinate dehydrogenase iron-sulfur subunit8e-1684
NC_009142:1282589:129374012937401294498759Saccharopolyspora erythraea NRRL 2338, complete genomesuccinate dehydrogenase iron-sulfur protein1e-1583.2
NC_006322:2851215:287271628727162873480765Bacillus licheniformis ATCC 14580, complete genomesuccinate dehydrogenase8e-1580.5
NC_006270:2850354:287250328725032873267765Bacillus licheniformis ATCC 14580, complete genomesuccinate dehydrogenase8e-1580.5
NC_015656:1653450:167324816732481674006759Frankia symbiont of Datisca glomerata chromosome, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein1e-1480.1
NC_016935:1306472:130823513082351309002768Paenibacillus mucilaginosus 3016 chromosome, complete genomeprotein SdhB3e-1479
NC_015690:3883243:388324338832433884010768Paenibacillus mucilaginosus KNP414 chromosome, complete genomeSdhB3e-1479
NC_005957:4311679:431303443130344313795762Bacillus thuringiensis serovar konkukian str. 97-27, completesuccinate dehydrogenase5e-1478.2
NC_011658:4301633:430298843029884303749762Bacillus cereus AH187 chromosome, complete genomesuccinate dehydrogenase iron-sulfur subunit1e-1377
NC_011969:4235818:423581842358184236579762Bacillus cereus Q1 chromosome, complete genomesuccinate dehydrogenase iron-sulfur subunit1e-1377
NC_015589:2019370:202178920217892022538750Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesuccinate dehydrogenase and fumarate reductase iron-sulfur protein2e-1376.3
NC_006958:359760:395516395516396265750Corynebacterium glutamicum ATCC 13032, complete genomesuccinate dehydrogenase4e-1168.6
NC_003450:359759:395516395516396265750Corynebacterium glutamicum ATCC 13032, complete genomesuccinate dehydrogenase/fumarate reductase iron-sulfur subunit4e-1168.6
NC_009342:464210:498757498757499506750Corynebacterium glutamicum R chromosome, complete genomesuccinate dehydrogenase/fumarate reductase iron-sulfur subunit6e-1167.8
NC_014972:2659388:270253927025392703303765Desulfobulbus propionicus DSM 2032 chromosome, complete genomesuccinate dehydrogenase subunit B4e-0961.6
NC_010545:236000:257683257683258432750Corynebacterium urealyticum DSM 7109, complete genomesuccinate dehydrogenase iron-sulfur protein2e-0859.3
NC_012590:284793:287585287585288334750Corynebacterium aurimucosum ATCC 700975, complete genomesuccinate dehydrogenase iron-sulfur protein3e-0858.9
NC_010617:774914:817713817713818462750Kocuria rhizophila DC2201, complete genomesuccinate dehydrogenase iron-sulfur protein4e-0858.5
NC_013947:5546315:555514055551405555883744Stackebrandtia nassauensis DSM 44728 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein5e-0858.2
NC_007604:1586243:159225415922541593093840Synechococcus elongatus PCC 7942, complete genomesuccinate dehydrogenase iron-sulfur protein1e-0757
NC_006576:2683467:268955626895562690317762Synechococcus elongatus PCC 6301, complete genomesuccinate dehydrogenase1e-0756.6
NC_008255:2839147:284463628446362845388753Cytophaga hutchinsonii ATCC 33406, complete genomesuccinate dehydrogenase, iron-sulfur subunit (fumarate reductase, iron-sulfur subunit)4e-0755.1
NC_008701:195850:239971239971240273303Pyrobaculum islandicum DSM 4184, complete genomeferredoxin6e-0754.3