Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:3564500 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
356460135656171017dipeptide ABC transporterQuickGO ontologyBLASTP
356566535674551791transporter extracellular solute-binding proteinQuickGO ontologyBLASTP
35674793568462984ABC transporterQuickGO ontologyBLASTP
35685133568896384hypothetical proteinBLASTP
356916035703021143peptide ABC transporterQuickGO ontologyBLASTP
357031635713771062BldKD peptide ABC transporterQuickGO ontologyBLASTP
35713883572365978BldKC-like peptide ABC transporterQuickGO ontologyBLASTP
357249235742941803BldKB-like transporter extracellular solute-binding proteinQuickGO ontologyBLASTP
357439935754391041BldKA-like ABC transporterQuickGO ontologyBLASTP
357590435778111908elongation factor TuQuickGO ontologyBLASTP
35779753578655681hypothetical protein
357874635810222277extracellular solute-binding proteinQuickGO ontologyBLASTP
35815133581803291hypothetical proteinBLASTP
35820273582707681hypothetical proteinBLASTP
358272735846761950succinate dehydrogenase flavoprotein subunitQuickGO ontologyBLASTP
35846733585449777succinate dehydrogenase iron-sulfur subunitQuickGO ontologyBLASTP
358558635875051920hypothetical protein