Pre_GI: BLASTN Hits

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Query: NC_013929:3564500 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 3564500, End: 3587505, Length: 23006

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_018750:51144345114434513594121508Streptomyces venezuelae ATCC 10712, complete genome02533BLASTN svgBLASTP svg
NC_003888:55505825550582557168721106Streptomyces coelicolor A3(2), complete genome02409BLASTN svgBLASTP svg
NC_015953:47934844793484481122917746Streptomyces sp. SirexAA-E chromosome, complete genome01265BLASTN svgBLASTP svg
NC_010572:28435892843589286504421456Streptomyces griseus subsp. griseus NBRC 13350, complete genome01231BLASTN svgBLASTP svg
NC_021177:54196205419620544465625037Streptomyces fulvissimus DSM 40593, complete genome01205BLASTN svgBLASTP svg
NC_009142:12825891282589130645923871Saccharopolyspora erythraea NRRL 2338, complete genome0898BLASTN svgBLASTP svg
NC_003155:3913789*3913789393748923701Streptomyces avermitilis MA-4680, complete genome3e-163583BLASTN svgBLASTP svg
NC_014165:3559305*3559305358380224498Thermobispora bispora DSM 43833 chromosome, complete genome2e-161577BLASTN svgBLASTP svg
NC_018581:33235003323500334596822469Gordonia sp. KTR9 chromosome, complete genome2e-72281BLASTN svgBLASTP svg
NC_015656:16534501653450168062227173Frankia symbiont of Datisca glomerata chromosome, complete genome2e-68268BLASTN svgBLASTP svg
NC_013093:832971*83297185669123721Actinosynnema mirum DSM 43827, complete genome2e-62248BLASTN svgBLASTP svg
NC_013739:2106662*2106662213745830797Conexibacter woesei DSM 14684, complete genome8e-56226BLASTN svgBLASTP svg
NC_013093:73773773773776222824492Actinosynnema mirum DSM 43827, complete genome1e-36163BLASTN svgBLASTP svg
NC_014831:329983*32998335731327331Thermaerobacter marianensis DSM 12885 chromosome, complete genome9e-31143BLASTN svgBLASTP svg
NC_007908:10101621010162103411423953Rhodoferax ferrireducens T118, complete genome6e-29137BLASTN svgBLASTP svg
NC_014210:53708685370868538907818211Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-28135BLASTN svgBLASTP svg
NC_008278:30258993025899304559919701Frankia alni ACN14a, complete genome9e-28133BLASTN svgBLASTP svg
NC_014761:74500*7450010128126782Oceanithermus profundus DSM 14977 chromosome, complete genome5e-26127BLASTN svgBLASTP svg
NC_009142:949510*94951097814228633Saccharopolyspora erythraea NRRL 2338, complete genome9e-25123BLASTN svgBLASTP svg
NC_014217:80040680040682559925194Starkeya novella DSM 506 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_013947:44133824413382443709923718Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_014761:74311374311376488521773Oceanithermus profundus DSM 14977 chromosome, complete genome8e-22113BLASTN svgBLASTP svg
NC_013169:12900001290000131283622837Kytococcus sedentarius DSM 20547, complete genome3e-21111BLASTN svgBLASTP svg
NC_014831:21330602133060217362540566Thermaerobacter marianensis DSM 12885 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_008148:30248673024867304671521849Rubrobacter xylanophilus DSM 9941, complete genome3e-18101BLASTN svgBLASTP svg
NC_014363:8228*82283606827841Olsenella uli DSM 7084 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_020260:1535394*1535394155809922706Cronobacter sakazakii Sp291, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_009778:14778411477841150009922259Enterobacter sakazakii ATCC BAA-894, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010998:11105211105213523024179Rhizobium etli CIAT 652 plasmid pA, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_008825:32985063298506332293624431Methylibium petroleiphilum PM1, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008786:14279714279716109918303Verminephrobacter eiseniae EF01-2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015588:24682072468207249482226616Isoptericola variabilis 225 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_003047:3202125*3202125322912727003Sinorhizobium meliloti 1021, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_020211:1655826*1655826167870522880Serratia marcescens WW4, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013967:19678961967896199023822343Haloferax volcanii DS2 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012559:10648211064821109367428854Laribacter hongkongensis HLHK9, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015389:17540617540619807822673Coriobacterium glomerans PW2 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009801:13926961392696142187429179Escherichia coli E24377A, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007606:12091321209132122967220541Shigella dysenteriae Sd197, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004129:10149861014986103609921114Pseudomonas fluorescens Pf-5, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014729:296103*29610331944823346Halogeometricum borinquense DSM 11551 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012881:3520956*3520956354109920144Desulfovibrio salexigens DSM 2638, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007384:20074672007467203964532179Shigella sonnei Ss046, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009832:2969376*2969376299269223317Serratia proteamaculans 568, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013172:95377295377297644022669Brachybacterium faecium DSM 4810, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014100:172452*17245219647824027Caulobacter segnis ATCC 21756 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020064:79422*7942212524145820Serratia marcescens FGI94, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020064:15014411501441151984318403Serratia marcescens FGI94, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007643:2722265*2722265275282330559Rhodospirillum rubrum ATCC 11170, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003911:1749467*1749467177014120675Silicibacter pomeroyi DSS-3, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002678:50606705060670511283352164Mesorhizobium loti MAFF303099, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003305:1297785*1297785132171123927Agrobacterium tumefaciens str. C58 chromosome linear, complete4e-0867.9BLASTN svgBLASTP svg
NC_010505:33763223376322340791331592Methylobacterium radiotolerans JCM 2831, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013172:2647716*2647716267284725132Brachybacterium faecium DSM 4810, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009512:10253651025365104401118647Pseudomonas putida F1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010999:21557142155714218202826315Lactobacillus casei, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012814:1357070*1357070138014923080Bifidobacterium animalis subsp. lactis Bl-04, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012815:1357003*1357003138008223080Bifidobacterium animalis subsp. lactis DSM 10140, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013960:13848813848816763229145Nitrosococcus halophilus Nc4 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014306:2703544*2703544272704423501Erwinia billingiae Eb661, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014334:19543331954333198420029868Lactobacillus casei str. Zhang chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015954:189000*18900021690727908Halophilic archaeon DL31 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002696:3759551*3759551378932829778Caulobacter crescentus CB15, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_005125:4117096*4117096414016723072Gloeobacter violaceus PCC 7421, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008782:18638531863853188890825056Acidovorax sp. JS42, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014121:16533851653385167270919325Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete7e-0763.9BLASTN svgBLASTP svg
NC_019940:32674363267436329462227187Thioflavicoccus mobilis 8321 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015379:35706583570658359449623839Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_014210:4377867*4377867439985221986Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_013743:1450417*1450417147310922693Haloterrigena turkmenica DSM 5511, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008751:2060391*2060391207813917749Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003155:5987000*5987000601614029141Streptomyces avermitilis MA-4680, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002937:1374532*1374532139596721436Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete3e-0661.9BLASTN svgBLASTP svg