Pre_GI: BLASTP Hits

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Query: NC_009012:3653111:3662722 Clostridium thermocellum ATCC 27405, complete genome

Start: 3662722, End: 3663105, Length: 384

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:3815690:383156738315673831953387Clostridium clariflavum DSM 19732 chromosome, complete genomequeuosine biosynthesis protein QueD2e-55214
NC_017095:2143845:214959321495932149952360Fervidobacterium pennivorans DSM 9078 chromosome, complete genomequeuosine biosynthesis protein QueD3e-26117
NC_017096:779550:798460798460798813354Caldisericum exile AZM16c01, complete genomeputative 6-pyruvoyl-tetrahydropterin synthase5e-23106
NC_017501:1829500:182959218295921830014423Neisseria meningitidis 8013, complete genomeputative 6-pyruvoyl tetrahydrobiopterin synthase (PTPS; PTP synthase)4e-1683.6
NC_017515:1744500:174606217460621746484423Neisseria meningitidis M04-240196 chromosome, complete genomequeuosine biosynthesis protein QueD4e-1683.6
NC_017514:1721416:172141617214161721838423Neisseria meningitidis M01-240149 chromosome, complete genomequeuosine biosynthesis protein QueD4e-1683.6
NC_017516:1755500:175710417571041757526423Neisseria meningitidis H44/76 chromosome, complete genomequeuosine biosynthesis protein QueD1e-1581.6
NC_013889:413909:436175436175436558384Thioalkalivibrio sp. K90mix chromosome, complete genome6-pyruvoyl tetrahydropterin synthase and hypothetical protein2e-1581.3
NC_017025:311832:331225331225331674450Flavobacterium indicum GPTSA100-9, complete genome6-pyruvoyltetrahydrobiopterin synthase2e-1580.9
NC_008699:1132790:115851611585161158872357Nocardioides sp. JS614, complete genome6-pyruvoyl tetrahydropterin synthase and hypothetical protein4e-1580.1
NC_009053:1257302:126952412695241269946423Actinobacillus pleuropneumoniae L20, complete genomeputative 6-pyruvoyl tetrahydrobiopterin synthase6e-1579.7
NC_010717:4626178:465246646524664652828363Xanthomonas oryzae pv. oryzae PXO99A, complete genomeputative 6-pyruvoyl tetrahydrobiopterin synthase1e-1478.6
NC_012881:3727150:374183037418303742216387Desulfovibrio salexigens DSM 2638, complete genome6-pyruvoyl tetrahydropterin synthase and hypothetical protein1e-1478.2
NC_002939:1866651:188416418841641884532369Geobacter sulfurreducens PCA, complete genome6-pyruvoyl tetrahydrobiopterin synthase family protein4e-1477
NC_010688:4235528:426629842662984266651354Xanthomonas campestris pv. campestris, complete genome6-pyruvoyl tetrahydrobiopterin synthase4e-1476.6
NC_017082:532000:559133559133559564432Bradyrhizobium sp. S23321, complete genomehypothetical protein4e-1476.6
NC_010644:691374:691933691933692280348Elusimicrobium minutum Pei191, complete genomeputative 6-pyruvoyl tetrahydropterin synthase7e-1475.9
NC_011979:3070110:309177530917753092143369Geobacter sp. FRC-32, complete genomequeuosine biosynthesis protein QueD7e-1475.9
NC_019907:845663:845663845663846019357Liberibacter crescens BT-1 chromosome, complete genomequeuosine biosynthesis protein QueD9e-1475.5
NC_012883:104987:130375130375130722348Thermococcus sibiricus MM 739, complete genome6-pyruvoyl tetrahydropterin synthase3e-1373.9
NC_015500:900807:923483923483923881399Treponema brennaborense DSM 12168 chromosome, complete genomequeuosine biosynthesis protein QueD6e-1372.8
NC_012751:1538500:155754815575481557928381Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete6-pyruvoyl tetrahydrobiopterin synthase (PTPS)2e-1271.2
NC_009256:3540531:354373935437393544191453Burkholderia vietnamiensis G4 chromosome 1, complete sequenceputative 6-pyruvoyl tetrahydropterin synthase3e-1270.5
NC_014618:4114004:414869441486944149056363Enterobacter cloacae SCF1 chromosome, complete genome6-pyruvoyl-tetrahydropterin synthase4e-1270.1
NC_014394:1989418:199325219932521993695444Gallionella capsiferriformans ES-2 chromosome, complete genome6-pyruvoyl tetrahydropterin synthase and hypothetical protein4e-1270.1
NC_007984:221030:234505234505234894390Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete6-pyruvoyl-tetrahydropterin synthase5e-1269.7
NC_006510:1501487:151067915106791511083405Geobacillus kaustophilus HTA426, complete genome6-pyruvoyltetrahydropterin synthase(PTP synthase)6e-1269.7
NC_011059:921690:942104942104942553450Prosthecochloris aestuarii DSM 271, complete genome6-pyruvoyl tetrahydropterin synthase and hypothetical protein6e-1269.3
NC_019673:2155669:217391921739192174275357Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-1168.6
NC_018419:226000:242890242890243252363Secondary endosymbiont of Ctenarytaina eucalypti chromosome,queuosine biosynthesis protein QueD1e-1168.6
AP010958:5272863:528024052802405280602363Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative 6-pyruvoyl tetrahydrobiopterin synthase1e-1168.6
NC_013353:5272863:528024052802405280602363Escherichia coli O103:H2 str. 12009, complete genome6-pyruvoyl tetrahydrobiopterin synthase1e-1168.6
NC_007512:865500:867798867798868286489Pelodictyon luteolum DSM 273, complete genome6-pyruvoyltetrahydropterin synthase1e-1168.2
NC_015224:889536:893451893451893813363Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative 6-pyruvoyl tetrahydrobiopterin synthase family protein3e-1167.4
NC_011060:1947795:194737119473711947820450Pelodictyon phaeoclathratiforme BU-1, complete genome6-pyruvoyl tetrahydropterin synthase and hypothetical protein3e-1167
NC_013729:863743:896177896177896494318Kribbella flavida DSM 17836, complete genome4e-1166.6
NC_004578:3849835:386535438653543865710357Pseudomonas syringae pv. tomato str. DC3000, complete genome6-pyruvoyl tetrahydrobiopterin synthase, putative5e-1166.2
NC_013422:1755875:180454418045441805002459Halothiobacillus neapolitanus c2, complete genome6-pyruvoyl tetrahydropterin synthase and hypothetical protein9e-1165.5
NC_009800:2889928:290944629094462909811366Escherichia coli HS, complete genomequeuosine biosynthesis protein QueD3e-1063.9
NC_010468:1029471:103082010308201031185366Escherichia coli ATCC 8739, complete genome6-pyruvoyl tetrahydropterin synthase3e-1063.9
NC_010473:2963951:298277829827782983143366Escherichia coli str. K-12 substr. DH10B, complete genome6-pyruvoyl tetrahydrobiopterin synthase (PTPS)3e-1063.9
NC_000913:2873443:289023628902362890601366Escherichia coli K12, complete genome6-pyruvoyl tetrahydrobiopterin synthase (PTPS)3e-1063.9
AC_000091:2872000:289087028908702891235366Escherichia coli W3110 DNA, complete genome6-pyruvoyl tetrahydrobiopterin synthase3e-1063.9
NC_012759:2757826:277604827760482776413366Escherichia coli BW2952 chromosome, complete genome6-pyruvoyl tetrahydrobiopterin synthase3e-1063.9
NC_019904:5526000:554796455479645548383420Echinicola vietnamensis DSM 17526 chromosome, complete genome6-pyruvoyl-tetrahydropterin synthase3e-1063.9
NC_004603:1961432:196785119678511968264414Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative 6-pyruvoyl tetrahydrobiopterin synthase8e-1062.4
NC_015676:1663700:168420016842001684550351Methanosalsum zhilinae DSM 4017 chromosome, complete genomehypothetical protein1e-0961.6
NC_009615:1469642:150928715092871509619333Parabacteroides distasonis ATCC 8503 chromosome, complete genome6-pyruvoyl tetrahydrobiopterin synthase4e-0960.1
NC_008278:2972323:298595229859522986344393Frankia alni ACN14a, complete genome6-pyruvoyl tetrahydrobiopterin synthase7e-0959.3
NC_007940:1178000:118397511839751184391417Rickettsia bellii RML369-C, complete genomePutative 6-pyruvoyl tetrahydropterin synthase5e-0856.2
NC_009883:343067:357750357750358166417Rickettsia bellii OSU 85-389, complete genomePutative 6-pyruvoyl tetrahydropterin synthase5e-0856.2
NC_016051:1129154:115159811515981152056459Thermococcus sp. AM4 chromosome, complete genomequeuosine biosynthesis protein QueD5e-0856.2
NC_017080:3452121:347154934715493472316768Phycisphaera mikurensis NBRC 102666, complete genomeputative 6-pyruvoyl tetrahydrobiopterin synthase7e-0855.8
NC_005071:172364:188478188478189398921Prochlorococcus marinus str. MIT 9313, complete genome6-pyruvoyl tetrahydropterin synthase1e-0755.1
NC_003413:214120:235100235100235555456Pyrococcus furiosus DSM 3638, complete genomeputative 6-pyruvoyl tetrahydrobiopterin synthase1e-0755.1
NC_014539:1:109591095911324366Burkholderia sp. CCGE1003 chromosome 1, complete sequencehypothetical protein3e-0753.9
NC_008820:211616:224666224666225586921Prochlorococcus marinus str. MIT 9303, complete genome6-pyruvoyl tetrahydropterin synthase3e-0753.9
NC_016929:197403:216492216492216908417Rickettsia canadensis str. CA410 chromosome, complete genome6-carboxy-5,6,7,8-tetrahydropterin synthase4e-0753.5
NC_009879:200419:215505215505215921417Rickettsia canadensis str. McKiel, complete genomehypothetical protein4e-0753.5
NC_013799:927300:949872949872950366495Hydrogenobacter thermophilus TK-6, complete genome6-pyruvoyl tetrahydrobiopterin synthase6e-0752.8
NC_017161:927290:949862949862950356495Hydrogenobacter thermophilus TK-6 chromosome, complete genome6-pyruvoyl-tetrahydropterin synthase6e-0752.8
NC_017195:1411936:141761314176131418053441Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeputative queuosine biosynthesis protein QueD6e-0752.8
NC_009900:231983:238743238743239165423Rickettsia massiliae MTU5, complete genomePutative 6-pyruvoyl tetrahydropterin synthase2e-0651.2
NC_016930:228000:233848233848234264417Rickettsia philipii str. 364D chromosome, complete genome6-carboxy-5,6,7,8-tetrahydropterin synthase4e-0650.4
NC_009882:232400:235817235817236233417Rickettsia rickettsii str. 'Sheila Smith', complete genomehypothetical protein3e-0650.4
NC_016909:230000:235771235771236187417Rickettsia rickettsii str. Arizona chromosome, complete genome6-carboxy-5,6,7,8-tetrahydropterin synthase3e-0650.4
NC_016911:232481:235859235859236275417Rickettsia rickettsii str. Hauke chromosome, complete genome6-carboxy-5,6,7,8-tetrahydropterin synthase3e-0650.4
NC_016913:917500:932787932787933203417Rickettsia rickettsii str. Brazil chromosome, complete genome6-carboxy-5,6,7,8-tetrahydropterin synthase3e-0650.4
NC_016914:231324:235998235998236414417Rickettsia rickettsii str. Hino chromosome, complete genome6-carboxy-5,6,7,8-tetrahydropterin synthase3e-0650.4
NC_010263:232482:235911235911236396486Rickettsia rickettsii str. Iowa, complete genome6-pyruvoyl tetrahydropterin synthase3e-0650.4
NC_017042:310000:316657316657317073417Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, complete6-carboxy-5,6,7,8-tetrahydropterin synthase5e-0650.1
NC_003103:225956:232040232040232558519Rickettsia conorii str. Malish 7, complete genomehypothetical protein4e-0650.1
NC_020410:1301500:130488913048891305332444Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete6-carboxy-5,6,7,8-tetrahydropterin synthase; queuosine biosynthesis5e-0649.7
NC_017028:316000:319078319078319494417Candidatus Rickettsia amblyommii str. GAT-30V chromosome, complete6-carboxy-5,6,7,8-tetrahydropterin synthase5e-0649.7
NC_015866:233448:238097238097238513417Rickettsia heilongjiangensis 054 chromosome, complete genome6-carboxy-5,6,7,8-tetrahydropterin synthase5e-0649.7
NC_016050:236000:239042239042239458417Rickettsia japonica YH, complete genomeputative 6-pyruvoyl tetrahydropterin synthase5e-0649.7
NC_017058:1200500:121513712151371215553417Rickettsia australis str. Cutlack chromosome, complete genome6-carboxy-5,6,7,8-tetrahydropterin synthase5e-0649.7
NC_009881:236500:239765239765240208444Rickettsia akari str. Hartford, complete genomehypothetical protein9e-0648.9
NC_012730:332500:347373347373347789417Rickettsia peacockii str. Rustic, complete genomehypothetical protein9e-0648.9