Pre_GI: BLASTP Hits

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Query: NC_009012:2953638:2957545 Clostridium thermocellum ATCC 27405, complete genome

Start: 2957545, End: 2959380, Length: 1836

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020134:420500:4434354434354453031869Clostridium stercorarium subsp. stercorarium DSM 8532, completephage tape measure protein1e-166587
NC_014376:1472304:1502368150236815043321965Clostridium saccharolyticum WM1 chromosome, complete genomephage tape measure protein1e-133477
NC_015913:117966:1442321442321468922661Candidatus Arthromitus sp. SFB-mouse-Japan, complete genometail length tape measure protein1e-73278
NC_013517:1501276:1510959151095915130792121Sebaldella termitidis ATCC 33386, complete genomephage tape measure protein5e-59229
NC_013315:1707293:1714007171400717163792373Clostridium difficile CD196 chromosome, complete genomephage tail tape measure protein5e-49196
NC_020291:795500:8491398491398511361998Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative tail length tape measure protein1e-27125
NC_010723:915697:9249249249249268731950Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein2e-26121
NC_009714:224325:2467282467282483201593Campylobacter hominis ATCC BAA-381, complete genomephage tape measure protein3e-22107
NC_017297:2531750:2538518253851825406772160Clostridium botulinum F str. 230613 chromosome, complete genomeputative tail length tape measure protein3e-1997.1
NC_014006:850763:8683478683478726394293Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein4e-1790.5
NC_002940:78392:9505395053972932241Haemophilus ducreyi 35000HP, complete genomepossible tail length tape measure protein1e-1689
NC_021066:2197490:2213979221397922167112733Raoultella ornithinolytica B6, complete genomephage tape measure protein4e-1687
NC_013850:1887556:1926468192646819290712604Klebsiella variicola At-22 chromosome, complete genomephage tape measure protein3e-1584
NC_014121:1357339:1358587135858713608872301Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-1482
NC_008563:2041345:2060436206043620636813246Escherichia coli APEC O1, complete genomephage-related minor tail protein2e-1481.3
NC_015968:2845751:2871835287183528741682334Enterobacter asburiae LF7a chromosome, complete genomephage tape measure protein3e-1480.5
NC_013361:3597812:3622769362276936260113243Escherichia coli O26:H11 str. 11368 chromosome, complete genometail length tape measure protein2e-1378.2
NC_013361:1593543:1597749159774916009913243Escherichia coli O26:H11 str. 11368 chromosome, complete genometail length tape measure protein2e-1378.2
NC_011094:638552:6385526385526417223171Salmonella enterica subsp. enterica serovar Schwarzengrund strgp212e-1377.8
NC_010554:1008444:1013509101350910168083300Proteus mirabilis HI4320, complete genometail length tape measure protein2e-1377.8
NC_014217:2020737:2044996204499620474342439Starkeya novella DSM 506 chromosome, complete genomephage tape measure protein3e-1377.4
NC_020418:2868000:2893771289377128970283258Morganella morganii subsp. morganii KT, complete genomePhage tail length tape-measure protein 13e-1377
NC_015663:4735808:4755280475528047576282349Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein5e-1376.6
NC_013008:1513000:1513338151333815165803243Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail length tape measure protein1e-1275.5
NC_011353:1513000:1513050151305015162923243Escherichia coli O157:H7 str. EC4115 chromosome, complete genometail length tape measure protein1e-1275.5
NC_013406:6052913:6056376605637660583581983Paenibacillus sp. Y412MC10 chromosome, complete genomehypothetical protein4e-1273.6
NC_002655:1655944:1658259165825916594521194Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933N1e-1172
NC_018515:3411276:3428368342836834300561689Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehypothetical protein3e-1170.9
NC_014121:3235911:3253415325341532568643450Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-1170.9
NC_011071:2770229:2795124279512427997074584Stenotrophomonas maltophilia R551-3, complete genomephage tape measure protein2e-1068.2
NC_011750:919953:9230809230809259292850Escherichia coli IAI39 chromosome, complete genometail length tape measure protein2e-0965.1
NC_013892:2005480:2019872201987220232463375Xenorhabdus bovienii SS-2004 chromosome, complete genometail component5e-0963.5
NC_013892:671000:6751336751336785073375Xenorhabdus bovienii SS-2004 chromosome, complete genometail component5e-0963.5
NC_011830:1504497:1519929151992915216261698Desulfitobacterium hafniense DCB-2, complete genomehypothetical protein7e-0962.8
NC_009436:2395913:2416369241636924196563288Enterobacter sp. 638, complete genomelambda family phage tail tape measure protein3e-0860.8
NC_011770:860944:8936318936318961142484Pseudomonas aeruginosa LESB58, complete genomePutative tail length tape measure protein2e-0654.7
NC_011770:1456667:1463761146376114662442484Pseudomonas aeruginosa LESB58, complete genomePutative tail length tape measure protein2e-0654.7
NC_016627:793583:8035318035318055642034Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein2e-0654.7
NC_010001:3614314:3622743362274336248812139Clostridium phytofermentans ISDg, complete genomehypothetical protein3e-0653.9
NC_008044:857759:8595818595818639364356Silicibacter sp. TM1040, complete genomeTape measure domain5e-0653.5