Pre_GI: BLASTP Hits

Some Help

Query: NC_008595:771753:788198 Mycobacterium avium 104, complete genome

Start: 788198, End: 789310, Length: 1113

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012590:2117027:215253721525372153355819Corynebacterium aurimucosum ATCC 700975, complete genomeputative phage recombinase4e-76285
NC_006270:1415001:143041114304111431232822Bacillus licheniformis ATCC 14580, complete genomeDNA binding, phage related protein2e-46186
NC_006322:1415863:143127414312741432095822Bacillus licheniformis ATCC 14580, complete genomeYqaK2e-46186
NC_016935:6464201:648503064850306485929900Paenibacillus mucilaginosus 3016 chromosome, complete genomeDNA-binding phage-related protein3e-44179
NC_016935:1636278:165086616508661651765900Paenibacillus mucilaginosus 3016 chromosome, complete genomeDNA-binding phage-related protein7e-44178
NC_014915:2963500:299691029969102997755846Geobacillus sp. Y412MC52 chromosome, complete genomeRecT protein2e-42173
NC_013411:597235:606180606180607025846Geobacillus sp. Y412MC61, complete genomeRecT protein2e-42173
NC_007712:1954808:1977354197735419783671014Sodalis glossinidius str. 'morsitans', complete genomephage recombinase3e-39162
NC_020134:420500:426773426773427588816Clostridium stercorarium subsp. stercorarium DSM 8532, completeprotein RecT9e-39161
NC_015437:1494777:151008915100891511000912Selenomonas sputigena ATCC 35185 chromosome, complete genomeRecT protein3e-38159
NC_016831:1734292:175921117592111760041831Salmonella enterica subsp. enterica serovar Gallinarum/pullorumphage recombination protein5e-36152
NC_014831:8965:218752187522801927Thermaerobacter marianensis DSM 12885 chromosome, complete genomeRecT protein8e-36151
NC_002655:2142587:216290221629022163711810Escherichia coli O157:H7 EDL933, complete genomerecombinase, DNA renaturation protein encoded by prophage CP-933R1e-35150
CP002185:1493280:150252315025231503332810Escherichia coli W, complete genomeRac prophage; recombination and repair protein2e-35149
NC_010473:1493983:150140415014041502213810Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; recombination and repair protein2e-35149
CP002516:2580774:260251826025182603327810Escherichia coli KO11, complete genomeRecT protein2e-35149
NC_000913:1404000:141200814120081412817810Escherichia coli K12, complete genomeRac prophage; recombination and repair protein2e-35149
AC_000091:1407693:141569814156981416507810Escherichia coli W3110 DNA, complete genomerecombination and repair protein2e-35149
NC_011415:1472500:147741214774121478221810Escherichia coli SE11 chromosome, complete genomerecombination and repair protein RecT2e-35149
NC_012759:1296000:130406713040671304876810Escherichia coli BW2952 chromosome, complete genomerecombination and repair protein RecT2e-35149
NC_012947:2366000:238242123824212383230810Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completerecombination and repair protein RecT2e-35149
NC_012967:1403733:141115414111541411963810Escherichia coli B str. REL606 chromosome, complete genomerecombination and repair protein RecT2e-35149
NC_016902:2580774:260251826025182603327810Escherichia coli KO11FL chromosome, complete genomeRecT protein2e-35149
NC_011205:1345511:135360813536081354438831Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853recombination and repair protein RecT9e-35147
NC_016077:1278104:128970512897051290493789Acidaminococcus intestini RyC-MR95 chromosome, complete genomerecombination and repair protein recT2e-34146
NC_017208:694500:700832700832701638807Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA-binding phage-related protein2e-32140
NC_009256:1253384:1255713125571312567651053Burkholderia vietnamiensis G4 chromosome 1, complete sequenceRecT protein1e-30134
NC_009255:1344000:1347310134731013483621053Burkholderia vietnamiensis G4 chromosome 2, complete sequenceRecT protein1e-30134
NC_010645:406794:4071934071934082241032Bordetella avium 197N, complete genomephage recombination protein2e-30133
NC_010645:1496816:1498810149881014998411032Bordetella avium 197N, complete genomephage recombination protein3e-30132
NC_012491:3736167:375579737557973756741945Brevibacillus brevis NBRC 100599, complete genomehypothetical protein1e-27124
NC_012658:2525931:253851825385182539402885Clostridium botulinum Ba4 str. 657 chromosome, complete genomeRecT1e-24114
NC_014394:993465:9980239980239990751053Gallionella capsiferriformans ES-2 chromosome, complete genomeRecT protein5e-23108
NC_012125:1897611:190973319097331910179447Salmonella enterica subsp. enterica serovar Paratyphi C strainRac prophage; recombination and repair protein3e-1893.2
NC_002662:447236:453010453010453816807Lactococcus lactis subsp. lactis Il1403, complete genomerecombinase9e-1788.2
NC_006087:2439252:245645624564562457241786Leifsonia xyli subsp. xyli str. CTCB07, complete genomephage recombination protein8e-1685.1
NC_014922:825396:837624837624838574951Haemophilus influenzae F3047 chromosome, complete genomerecombinational DNA repair protein, RecE pathway1e-1584.3
NC_002737:1207880:121599812159981216987990Streptococcus pyogenes M1 GAS, complete genomeputative recombinase - phage associated5e-1582.4
NC_003485:579946:585575585575586564990Streptococcus pyogenes MGAS8232, complete genomeputative recombinase5e-1582.4
NC_009332:1269000:130148813014881302477990Streptococcus pyogenes str. Manfredo chromosome, complete genomephage RecT family protein5e-1582.4
NC_003485:1228149:123491012349101235839930Streptococcus pyogenes MGAS8232, complete genomeputative recombinase7e-1581.6
NC_020207:1170000:117113711711371172027891Enterococcus faecium NRRL B-2354, complete genomeRecombinational DNA repair protein RecT (prophage associated)2e-1480.1
NC_016809:389561:397892397892398803912Haemophilus influenzae 10810, complete genomehypothetical protein3e-1479.7
NC_016809:1778000:178426517842651785185921Haemophilus influenzae 10810, complete genomerecombinational DNA repair protein, RecE pathway4e-1479.3
NC_009567:904922:915925915925916845921Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein4e-1479.3
NC_014922:1360000:138059513805951381515921Haemophilus influenzae F3047 chromosome, complete genomerecombinational DNA repair protein4e-1479.3
NC_007146:1405459:141681714168171417737921Haemophilus influenzae 86-028NP, complete genomepredicted recombinational DNA repair protein, RecE pathway4e-1479.3
NC_012891:1100726:110955111095511110477927Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,recT protein7e-1478.6
NC_012471:141463:148361148361149281921Streptococcus equi subsp. equi 4047, complete genomephage RecT family protein1e-1377.8
NC_010999:1245239:125824412582441259107864Lactobacillus casei, complete genomeRecT protein8e-1271.6
NC_002927:2338549:234097023409702341956987Bordetella bronchiseptica RB50, complete genomephage-related DNA recombination protein2e-1067
NC_014551:576000:581968581968582807840Bacillus amyloliquefaciens DSM 7, complete genomeDNA recombination protein; skin element6e-1065.5
NC_010002:2110953:211638421163842117307924Delftia acidovorans SPH-1, complete genomeRecT protein1e-0964.3
NC_008258:269806:282892282892283794903Shigella flexneri 5 str. 8401, complete genomeputative phage-related DNA recombination protein6e-0962
NC_009800:289000:298005298005298907903Escherichia coli HS, complete genomeRecT family protein1e-0861.2
NC_017328:303987:314833314833315735903Shigella flexneri 2002017 chromosome, complete genomeputative phage-related DNA recombination protein1e-0861.2
NC_013282:1200993:121037312103731211278906Cronobacter turicensis, complete genomehypothetical protein2e-0860.5
NC_012781:1968827:198714019871401988048909Eubacterium rectale ATCC 33656, complete genomeRecT family protein3e-0860.1
NC_013850:1887556:189678918967891897682894Klebsiella variicola At-22 chromosome, complete genomeRecT protein3e-0860.1
NC_006905:1961774:198265319826531982994342Salmonella enterica subsp. enterica serovar Choleraesuis strRecT protein3e-0756.6
NC_018515:4660808:468925646892564690083828Desulfosporosinus meridiei DSM 13257 chromosome, complete genomerecombinase, phage RecT family5e-0755.8
NC_020063:2565605:258956325895632590489927Enterobacteriaceae bacterium strain FGI 57, complete genomerecombinase, phage RecT family7e-0652
NC_017506:93494:135718135718136674957Marinobacter adhaerens HP15 chromosome, complete genomeRecT protein8e-0651.6