Pre_GI: BLASTP Hits

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Query: NC_008595:2687245:2707976 Mycobacterium avium 104, complete genome

Start: 2707976, End: 2708665, Length: 690

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016947:1455744:146311314631131463934822Mycobacterium intracellulare MOTT-02 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR3e-113407
NC_016948:2931285:295277429527742953595822Mycobacterium intracellulare MOTT-64 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR1e-107389
NC_008595:1951887:195825319582531959074822Mycobacterium avium 104, complete genomeretinol dehydrogenase 121e-96352
NC_016114:7252500:727252672725267273431906Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-35149
NC_010407:1114408:113309811330981134057960Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative oxidoreductase4e-35147
NC_013406:3583474:359950735995073600415909Paenibacillus sp. Y412MC10 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR6e-34144
NC_015957:5225903:523357652335765234457882Streptomyces violaceusniger Tu 4113 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-33142
NC_014210:5048502:506555750655575066495939Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,short-chain dehydrogenase/reductase SDR3e-33141
NC_004463:1369165:136828713682871369225939Bradyrhizobium japonicum USDA 110, complete genomedehydrogenase4e-29128
NC_015434:666692:697773697773698678906Verrucosispora maris AB-18-032 chromosome, complete genomeshort-chain dehydrogenase/reductase sdr2e-28126
NC_008463:1293079:132801213280121328974963Pseudomonas aeruginosa UCBPP-PA14, complete genomepossible dehydrogenase1e-27123
NC_015957:3282183:328377132837713284580810Streptomyces violaceusniger Tu 4113 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR1e-27122
NC_010475:1563578:156504515650451565962918Synechococcus sp. PCC 7002, complete genomeoxidoreductase, short chain dehydrogenase/reductase family2e-27122
NC_013037:1072266:1078720107872010797451026Dyadobacter fermentans DSM 18053, complete genomeshort-chain dehydrogenase/reductase SDR2e-27122
NC_003296:1419992:141999214199921420912921Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE OXIDOREDUCTASE PROTEIN9e-27120
NC_012489:3503632:350363235036323504630999Gemmatimonas aurantiaca T-27, complete genomeputative oxidoreductase3e-26118
NC_010628:2418000:243025524302552431166912Nostoc punctiforme PCC 73102, complete genomeshort-chain dehydrogenase/reductase SDR1e-25116
NC_015703:4483500:451396545139654514888924Runella slithyformis DSM 19594 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR6e-25114
NC_009254:442360:455734455734456645912Burkholderia vietnamiensis G4 chromosome 3, complete sequenceshort-chain dehydrogenase/reductase SDR2e-24112
NC_011365:1171536:117581411758141176794981Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-24112
NC_013595:4031947:403606740360674037023957Streptosporangium roseum DSM 43021, complete genomeoxidoreductase2e-24112
NC_015379:3570658:357604135760413576991951Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative short chain dehydrogenase7e-24110
NC_007492:3180480:320861632086163209599984Pseudomonas fluorescens PfO-1, complete genomeShort-chain dehydrogenase/reductase SDR2e-23109
NC_009380:3384737:339930533993053400222918Salinispora tropica CNB-440 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-23109
NC_016609:701500:714889714889715845957Niastella koreensis GR20-10 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR6e-23107
NC_015381:2859000:2888692288869228897111020Burkholderia gladioli BSR3 chromosome 1, complete sequenceshort-chain dehydrogenase/reductase SDR7e-23107
NC_010515:2449143:246325224632522464157906Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceshort-chain dehydrogenase/reductase SDR6e-22104
NC_005071:523423:530611530611531513903Prochlorococcus marinus str. MIT 9313, complete genomeShort-chain dehydrogenase/reductase (SDR) superfamily8e-22103
NC_015709:1769806:178661417866141787606993Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeshort-chain dehydrogenase/reductase SDR3e-21102
NC_013061:2055000:2056381205638120574001020Pedobacter heparinus DSM 2366, complete genomeshort-chain dehydrogenase/reductase SDR6e-21100
NC_009004:2477220:2497834249783424988531020Lactococcus lactis subsp. cremoris MG1363, complete genomehypothetical protein predicted by Glimmer/Critica2e-2099.4
NC_003888:211748:228714228714229649936Streptomyces coelicolor A3(2), complete genomeoxidoreductase2e-2099
NC_014318:6539137:654020665402066541066861Amycolatopsis mediterranei U32 chromosome, complete genomeshort-chain dehydrogenase1e-1996.7
NC_005070:2308363:230913623091362310053918Synechococcus sp. WH 8102, complete genomeShort-chain dehydrogenase/reductase (SDR) superfamily3e-1995.5
NC_016887:4343830:434953643495364350498963Nocardia cyriacigeorgica GUH-2, complete genomeputative Short-chain dehydrogenase/reductase8e-1994
NC_021177:2309615:232745723274572328410954Streptomyces fulvissimus DSM 40593, complete genomeShort chain dehydrogenase2e-1892.8
NC_015167:1911758:191175819117581912702945Cellulophaga lytica DSM 7489 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-1892.4
NC_017186:6539181:654025065402506541098849Amycolatopsis mediterranei S699 chromosome, complete genomeshort-chain dehydrogenase2e-1892.4
NC_013169:513327:533666533666534490825Kytococcus sedentarius DSM 20547, complete genomeshort-chain dehydrogenase of unknown substrate specificity1e-1789.7
NC_003888:3111998:312861931286193129590972Streptomyces coelicolor A3(2), complete genomeoxidoreductase2e-1789
NC_012808:3972983:399450239945023995422921Methylobacterium extorquens AM1, complete genomeShort-chain dehydrogenase/reductase SDR7e-1787.4
NC_016906:4562874:456334245633424564334993Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative oxidoreductase, short chain dehydrogenase/reductase family8e-1787
NC_014210:1625954:163991916399191640866948Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,short-chain dehydrogenase/reductase SDR9e-1787
NC_016582:3763476:377629737762973777244948Streptomyces bingchenggensis BCW-1 chromosome, complete genomedehydrogenase1e-1686.7
NC_010628:3409000:342792034279203428882963Nostoc punctiforme PCC 73102, complete genomelight-dependent protochlorophyllide reductase6e-1581.3
NC_013235:682902:688792688792689772981Nakamurella multipartita DSM 44233, complete genomeshort-chain dehydrogenase/reductase SDR2e-1479.7
NC_014364:394899:400305400305401180876Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR4e-1478.2
NC_005042:513931:5167445167445177631020Prochlorococcus marinus subsp. marinus str. CCMP1375, completeprotochlorophyllide oxidoreductase6e-1374.3
NC_009959:55567:771377138699987Dinoroseobacter shibae DFL 12 plasmid pDSHI05, complete sequenceprotochlorophyllide oxidoreductase3e-1272
NC_009664:4423829:450109845010984502078981Kineococcus radiotolerans SRS30216, complete genomeshort-chain dehydrogenase/reductase SDR1e-1170.1
NC_003888:211748:223294223294224232939Streptomyces coelicolor A3(2), complete genomeshort chain dehydrogenase3e-1168.9
UCMB5137:808967:812376812376813245870Bacillus atrophaeus UCMB-51373-oxoacyl-[acyl-carrier-protein] reductase4e-1168.6
NC_008817:539349:5419805419805429841005Prochlorococcus marinus str. MIT 9515, complete genomeLight dependent protochlorophyllide oxido-reductase5e-1167.8
NC_009051:1118486:113313511331351133980846Methanoculleus marisnigri JR1, complete genomeshort-chain dehydrogenase/reductase SDR9e-1167
NC_008819:541000:5415775415775425901014Prochlorococcus marinus str. NATL1A, complete genomeLight dependent protochlorophyllide oxido-reductase3e-1065.5
NC_013939:1625491:163963116396311640470840Deferribacter desulfuricans SSM1, complete genomeshort-chain dehydrogenase/reductase SDR4e-1065.1
NC_007335:1820332:1821713182171318227261014Prochlorococcus marinus str. NATL2A, complete genomeprotochlorophyllide oxidoreductase4e-1065.1
NC_007513:1159497:117699711769971177965969Synechococcus sp. CC9902, complete genomepossible light-dependent protochlorophyllide oxido-reductase4e-1065.1
NC_007577:503440:5061055061055071091005Prochlorococcus marinus str. MIT 9312, complete genomeProtochlorophyllide reductase5e-1064.7
NC_007929:1463295:146836414683641469218855Lactobacillus salivarius subsp. salivarius UCC118, complete genomeDehydrogenase1e-0963.5
NC_013440:8405719:8405719840571984067411023Haliangium ochraceum DSM 14365, complete genomeshort-chain dehydrogenase/reductase SDR1e-0963.2
NC_015152:2026049:204986620498662050822957Spirochaeta sp. Buddy chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-0962.8
NC_014666:7222000:723498972349897235822834Frankia sp. EuI1c chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-0962.8
NC_009091:493302:4959674959674969711005Prochlorococcus marinus str. MIT 9301, complete genomeLight dependent protochlorophyllide oxido-reductase2e-0962.8
NC_011027:303000:329355329355330161807Chlorobaculum parvum NCIB 8327, complete genomeshort-chain dehydrogenase/reductase SDR2e-0962.4
NC_009481:822975:824617824617825591975Synechococcus sp. WH 7803 chromosome, complete genomelight-dependent protochlorophyllide oxido-reductase6e-0961.2
NC_016935:4435759:445670644567064457626921Paenibacillus mucilaginosus 3016 chromosome, complete genomeshort chain dehydrogenase family protein2e-0859.3
NC_016582:4983222:499673849967384997625888Streptomyces bingchenggensis BCW-1 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR1e-0757
NC_013929:5431954:544896754489675449755789Streptomyces scabiei 87.22 chromosome, complete genomeoxidoreductase2e-0756.6
NC_013799:1:289728973568672Hydrogenobacter thermophilus TK-6, complete genomeshort-chain dehydrogenase1e-0756.6
NC_017161:1:295829583629672Hydrogenobacter thermophilus TK-6 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR1e-0756.6
NC_018691:3082000:309018930901893091157969Alcanivorax dieselolei B5 chromosome, complete genomeGlucose/ribitol short chain dehydrogenase/reductase family protein3e-0755.5
NC_014654:302000:313497313497314324828Halanaerobium sp. 'sapolanicus' chromosome, complete genomeshort-chain dehydrogenase/reductase SDR4e-0755.1
NC_016641:2225779:224650422465042247268765Paenibacillus terrae HPL-003 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR5e-0754.7
NC_005072:508827:5114655114655124691005Prochlorococcus marinus subsp. pastoris str. CCMP1986, completeprotochlorophyllide oxidoreductase1e-0653.5
NC_014655:130636:149025149025149924900Leadbetterella byssophila DSM 17132 chromosome, complete genomedehydrogenase/reductase1e-0653.1
NC_014643:195948:196439196439197221783Rothia dentocariosa ATCC 17931 chromosome, complete genomeoxidoreductase UcpA2e-0652.4
NC_014539:1839840:185761318576131858344732Burkholderia sp. CCGE1003 chromosome 1, complete sequenceshort-chain dehydrogenase/reductase SDR4e-0652
NC_014541:2325780:234675723467572347569813Ferrimonas balearica DSM 9799 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR4e-0651.6