Pre_GI: BLASTP Hits

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Query: NC_008595:1951887:1958253 Mycobacterium avium 104, complete genome

Start: 1958253, End: 1959074, Length: 822

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016948:2931285:295277429527742953595822Mycobacterium intracellulare MOTT-64 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-126452
NC_016947:1455744:146311314631131463934822Mycobacterium intracellulare MOTT-02 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR4e-126450
NC_008595:2687245:270797627079762708665690Mycobacterium avium 104, complete genomeretinol dehydrogenase 122e-96352
NC_016114:7252500:727252672725267273431906Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR9e-47187
NC_015957:5225903:523357652335765234457882Streptomyces violaceusniger Tu 4113 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR8e-46184
NC_014210:5048502:506555750655575066495939Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,short-chain dehydrogenase/reductase SDR1e-44180
NC_010407:1114408:113309811330981134057960Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative oxidoreductase6e-41167
NC_004463:1369165:136828713682871369225939Bradyrhizobium japonicum USDA 110, complete genomedehydrogenase8e-41167
NC_015434:666692:697773697773698678906Verrucosispora maris AB-18-032 chromosome, complete genomeshort-chain dehydrogenase/reductase sdr4e-38158
NC_003296:1419992:141999214199921420912921Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE OXIDOREDUCTASE PROTEIN8e-38157
NC_008463:1293079:132801213280121328974963Pseudomonas aeruginosa UCBPP-PA14, complete genomepossible dehydrogenase5e-36151
NC_010475:1563578:156504515650451565962918Synechococcus sp. PCC 7002, complete genomeoxidoreductase, short chain dehydrogenase/reductase family1e-35150
NC_013406:3583474:359950735995073600415909Paenibacillus sp. Y412MC10 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR3e-35149
NC_009254:442360:455734455734456645912Burkholderia vietnamiensis G4 chromosome 3, complete sequenceshort-chain dehydrogenase/reductase SDR3e-34145
NC_015703:4483500:451396545139654514888924Runella slithyformis DSM 19594 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR8e-34144
NC_015957:3282183:328377132837713284580810Streptomyces violaceusniger Tu 4113 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR5e-33141
NC_010628:2418000:243025524302552431166912Nostoc punctiforme PCC 73102, complete genomeshort-chain dehydrogenase/reductase SDR3e-31135
NC_003888:211748:228714228714229649936Streptomyces coelicolor A3(2), complete genomeoxidoreductase3e-31135
NC_007492:3180480:320861632086163209599984Pseudomonas fluorescens PfO-1, complete genomeShort-chain dehydrogenase/reductase SDR1e-30133
NC_013037:1072266:1078720107872010797451026Dyadobacter fermentans DSM 18053, complete genomeshort-chain dehydrogenase/reductase SDR1e-30133
NC_013595:4031947:403606740360674037023957Streptosporangium roseum DSM 43021, complete genomeoxidoreductase5e-29128
NC_015379:3570658:357604135760413576991951Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative short chain dehydrogenase8e-29127
NC_012489:3503632:350363235036323504630999Gemmatimonas aurantiaca T-27, complete genomeputative oxidoreductase1e-27124
NC_021177:2309615:232745723274572328410954Streptomyces fulvissimus DSM 40593, complete genomeShort chain dehydrogenase9e-28124
NC_015381:2859000:2888692288869228897111020Burkholderia gladioli BSR3 chromosome 1, complete sequenceshort-chain dehydrogenase/reductase SDR5e-28124
NC_016887:4343830:434953643495364350498963Nocardia cyriacigeorgica GUH-2, complete genomeputative Short-chain dehydrogenase/reductase5e-27121
NC_011365:1171536:117581411758141176794981Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR6e-27121
NC_016609:701500:714889714889715845957Niastella koreensis GR20-10 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR3e-26118
NC_013061:2055000:2056381205638120574001020Pedobacter heparinus DSM 2366, complete genomeshort-chain dehydrogenase/reductase SDR7e-26117
NC_012808:3972983:399450239945023995422921Methylobacterium extorquens AM1, complete genomeShort-chain dehydrogenase/reductase SDR7e-26117
NC_009380:3384737:339930533993053400222918Salinispora tropica CNB-440 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-25116
NC_005071:523423:530611530611531513903Prochlorococcus marinus str. MIT 9313, complete genomeShort-chain dehydrogenase/reductase (SDR) superfamily4e-25115
NC_015167:1911758:191175819117581912702945Cellulophaga lytica DSM 7489 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR1e-24113
NC_005070:2308363:230913623091362310053918Synechococcus sp. WH 8102, complete genomeShort-chain dehydrogenase/reductase (SDR) superfamily3e-24112
NC_014318:6539137:654020665402066541066861Amycolatopsis mediterranei U32 chromosome, complete genomeshort-chain dehydrogenase2e-24112
NC_015709:1769806:178661417866141787606993Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeshort-chain dehydrogenase/reductase SDR8e-24110
NC_010515:2449143:246325224632522464157906Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceshort-chain dehydrogenase/reductase SDR2e-23109
NC_009004:2477220:2497834249783424988531020Lactococcus lactis subsp. cremoris MG1363, complete genomehypothetical protein predicted by Glimmer/Critica3e-23108
NC_017186:6539181:654025065402506541098849Amycolatopsis mediterranei S699 chromosome, complete genomeshort-chain dehydrogenase6e-23108
NC_016582:3763476:377629737762973777244948Streptomyces bingchenggensis BCW-1 chromosome, complete genomedehydrogenase5e-22105
NC_008595:2687245:270636327063632706566204Mycobacterium avium 104, complete genomeshort chain dehydrogenase3e-22105
NC_014210:1625954:163991916399191640866948Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,short-chain dehydrogenase/reductase SDR1e-21103
NC_003888:3111998:312861931286193129590972Streptomyces coelicolor A3(2), complete genomeoxidoreductase1e-1893.6
NC_014364:394899:400305400305401180876Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR1e-1893.6
NC_016906:4562874:456334245633424564334993Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative oxidoreductase, short chain dehydrogenase/reductase family5e-1891.7
NC_009664:4423829:450109845010984502078981Kineococcus radiotolerans SRS30216, complete genomeshort-chain dehydrogenase/reductase SDR8e-1890.9
NC_013169:513327:533666533666534490825Kytococcus sedentarius DSM 20547, complete genomeshort-chain dehydrogenase of unknown substrate specificity2e-1789.7
NC_013235:682902:688792688792689772981Nakamurella multipartita DSM 44233, complete genomeshort-chain dehydrogenase/reductase SDR6e-1788.2
NC_013440:8405719:8405719840571984067411023Haliangium ochraceum DSM 14365, complete genomeshort-chain dehydrogenase/reductase SDR1e-1687
NC_003888:211748:223294223294224232939Streptomyces coelicolor A3(2), complete genomeshort chain dehydrogenase2e-1686.3
NC_010628:3409000:342792034279203428882963Nostoc punctiforme PCC 73102, complete genomelight-dependent protochlorophyllide reductase4e-1685.5
NC_005042:513931:5167445167445177631020Prochlorococcus marinus subsp. marinus str. CCMP1375, completeprotochlorophyllide oxidoreductase2e-1583.6
NC_008819:541000:5415775415775425901014Prochlorococcus marinus str. NATL1A, complete genomeLight dependent protochlorophyllide oxido-reductase5e-1581.6
NC_007335:1820332:1821713182171318227261014Prochlorococcus marinus str. NATL2A, complete genomeprotochlorophyllide oxidoreductase8e-1581.3
NC_009091:493302:4959674959674969711005Prochlorococcus marinus str. MIT 9301, complete genomeLight dependent protochlorophyllide oxido-reductase2e-1376.3
NC_009840:544816:5474875474875484911005Prochlorococcus marinus str. MIT 9215, complete genomeLight dependent protochlorophyllide oxido-reductase3e-1375.9
NC_007577:503440:5061055061055071091005Prochlorococcus marinus str. MIT 9312, complete genomeProtochlorophyllide reductase8e-1374.3
NC_008817:539349:5419805419805429841005Prochlorococcus marinus str. MIT 9515, complete genomeLight dependent protochlorophyllide oxido-reductase4e-1272.4
NC_013939:1625491:163963116396311640470840Deferribacter desulfuricans SSM1, complete genomeshort-chain dehydrogenase/reductase SDR6e-1271.6
NC_008816:518895:5215595215595225631005Prochlorococcus marinus str. AS9601, complete genomeLight dependent protochlorophyllide oxido-reductase1e-1170.9
NC_015152:2026049:204986620498662050822957Spirochaeta sp. Buddy chromosome, complete genomeshort-chain dehydrogenase/reductase SDR1e-1170.9
NC_009959:55567:771377138699987Dinoroseobacter shibae DFL 12 plasmid pDSHI05, complete sequenceprotochlorophyllide oxidoreductase3e-1169.3
NC_009051:1118486:113313511331351133980846Methanoculleus marisnigri JR1, complete genomeshort-chain dehydrogenase/reductase SDR8e-1167.8
NC_018691:3082000:309018930901893091157969Alcanivorax dieselolei B5 chromosome, complete genomeGlucose/ribitol short chain dehydrogenase/reductase family protein4e-1065.5
NC_007513:1159497:117699711769971177965969Synechococcus sp. CC9902, complete genomepossible light-dependent protochlorophyllide oxido-reductase4e-1065.5
NC_013169:513327:534487534487535449963Kytococcus sedentarius DSM 20547, complete genomedehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein5e-1065.1
UCMB5137:808967:812376812376813245870Bacillus atrophaeus UCMB-51373-oxoacyl-[acyl-carrier-protein] reductase9e-1064.3
NC_011027:303000:329355329355330161807Chlorobaculum parvum NCIB 8327, complete genomeshort-chain dehydrogenase/reductase SDR1e-0963.9
NC_016935:4435759:445670644567064457626921Paenibacillus mucilaginosus 3016 chromosome, complete genomeshort chain dehydrogenase family protein2e-0962.8
NC_007929:1463295:146836414683641469218855Lactobacillus salivarius subsp. salivarius UCC118, complete genomeDehydrogenase4e-0962
NC_016582:4983222:499673849967384997625888Streptomyces bingchenggensis BCW-1 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-0859.7
NC_005072:508827:5114655114655124691005Prochlorococcus marinus subsp. pastoris str. CCMP1986, completeprotochlorophyllide oxidoreductase7e-0858.2
NC_009481:822975:824617824617825591975Synechococcus sp. WH 7803 chromosome, complete genomelight-dependent protochlorophyllide oxido-reductase9e-0857.8
NC_016582:11672500:116901111169011111690797687Streptomyces bingchenggensis BCW-1 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR1e-0757.4
NC_013929:5431954:544896754489675449755789Streptomyces scabiei 87.22 chromosome, complete genomeoxidoreductase2e-0757
NC_014623:7093203:711496171149617115800840Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeshort-chain dehydrogenase/reductase2e-0757
NC_016906:2871272:288407728840772884832756Gordonia polyisoprenivorans VH2 chromosome, complete genomeshort-chain dehydrogenase/reductase3e-0755.8
NC_014666:7222000:723498972349897235822834Frankia sp. EuI1c chromosome, complete genomeshort-chain dehydrogenase/reductase SDR4e-0755.5
NC_016641:2225779:224650422465042247268765Paenibacillus terrae HPL-003 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR5e-0755.1
NC_013132:7204082:722528172252817226054774Chitinophaga pinensis DSM 2588, complete genomeshort-chain dehydrogenase/reductase SDR6e-0755.1
NC_013169:612456:640493640493641215723Kytococcus sedentarius DSM 20547, complete genomedehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein2e-0653.5
NC_014654:302000:313497313497314324828Halanaerobium sp. 'sapolanicus' chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-0653.5
NC_013799:1:289728973568672Hydrogenobacter thermophilus TK-6, complete genomeshort-chain dehydrogenase3e-0652.8
NC_017161:1:295829583629672Hydrogenobacter thermophilus TK-6 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR3e-0652.8
NC_014541:2325780:234675723467572347569813Ferrimonas balearica DSM 9799 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR4e-0652
NC_009953:5193471:520856152085615209274714Salinispora arenicola CNS-205 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR4e-0652
NC_012108:1694817:171549417154941716288795Desulfobacterium autotrophicum HRM2, complete genomeputative dehydrogenase/reductase family protein5e-0651.6
NC_014655:130636:149025149025149924900Leadbetterella byssophila DSM 17132 chromosome, complete genomedehydrogenase/reductase6e-0651.6