Pre_GI: BLASTP Hits

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Query: NC_008593:841291:847782 Clostridium novyi NT, complete genome

Start: 847782, End: 849737, Length: 1956

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:906969:9133929133929153561965Clostridium botulinum BKT015925 chromosome, complete genomeV-type sodium ATP synthase subunit I0875
NC_009697:2680607:2691808269180826937691962Clostridium botulinum A str. ATCC 19397 chromosome, completeV-type ATP synthase subunit I7e-140498
NC_012563:2979147:2992960299296029949211962Clostridium botulinum A2 str. Kyoto, complete genomeV-type ATPase, I subunit3e-139495
NC_008262:1795914:1804097180409718060431947Clostridium perfringens SM101, complete genomeV-type ATPase, I subunit5e-122438
NC_008261:2117207:2130044213004421319931950Clostridium perfringens ATCC 13124, complete genomeV-type ATPase, I subunit2e-121437
NC_003366:1901898:1914734191473419166801947Clostridium perfringens str. 13, complete genomeATP synthase subunit I1e-121437
NC_013192:815854:8225828225828245551974Leptotrichia buccalis DSM 1135, complete genomeSodium-transporting two-sector ATPase1e-106387
NC_010723:2735196:2746002274600227479361935Clostridium botulinum E3 str. Alaska E43, complete genomeV-type ATPase, I subunit3e-103376
NC_010674:2930259:2941689294168929436231935Clostridium botulinum B str. Eklund 17B, complete genomeV-type ATPase, I subunit1e-101370
NC_013315:3214063:3225782322578232277071926Clostridium difficile CD196 chromosome, complete genomeV-type sodium ATP synthase subunit I1e-91338
NC_017179:3222015:3233734323373432356591926Clostridium difficile BI1, complete genomeV-type sodium ATP synthase subunit I1e-91338
NC_014209:2257316:2271408227140822733811974Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,V-type ATPase 116 kDa subunit4e-90332
NC_013921:2375900:2389990238999023919631974Thermoanaerobacter italicus Ab9 chromosome, complete genomeV-type ATPase 116 kDa subunit1e-89331
NC_010320:2397395:2411842241184224137731932Thermoanaerobacter sp. X514 chromosome, complete genomeH(+)-transporting two-sector ATPase5e-89329
NC_014538:2396559:2411006241100624129371932Thermoanaerobacter sp. X513 chromosome, complete genomeV-type ATPase 116 kDa subunit5e-89329
NC_010321:2319820:2332550233255023345231974Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeH(+)-transporting two-sector ATPase1e-88327
NC_014964:2301835:2314565231456523165381974Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeV-type ATPase 116 kDa subunit1e-88327
NC_009785:130252:1339321339321358871956Streptococcus gordonii str. Challis substr. CH1, complete genomev-type sodium ATP synthase, chain I8e-69261
NC_015574:2057602:2064237206423720662432007Methanobacterium sp. SWAN-1 chromosome, complete genomeV-type ATPase 116 kDa subunit1e-56221
NC_000909:201000:2120612120612141482088Methanocaldococcus jannaschii DSM 2661, complete genomeATP synthase subunit I1e-52208
NC_014222:186876:1912651912651933072043Methanococcus voltae A3 chromosome, complete genomeV-type ATPase 116 kDa subunit7e-52205
NC_013407:1610221:1619996161999616220622067Methanocaldococcus vulcanius M7, complete genomeV-type ATPase 116 kDa subunit1e-51205
NC_012883:1603744:1617564161756416195491986Thermococcus sibiricus MM 739, complete genomeA1A0 ATP synthase, subunit a7e-51202
NC_015216:405657:4101194101194121041986Methanobacterium sp. AL-21 chromosome, complete genomeV-type ATPase 116 kDa subunit2e-50201
NC_013156:431795:4371474371474391622016Methanocaldococcus fervens AG86, complete genomeV-type ATPase 116 kDa subunit2e-50201
NC_003413:181525:1861071861071880981992Pyrococcus furiosus DSM 3638, complete genomeATP synthase subunit I3e-50200
NC_015562:627000:6315636315636336052043Methanotorris igneus Kol 5 chromosome, complete genomeV-type ATPase 116 kDa subunit4e-49196
NC_009135:494949:5073525073525094212070Methanococcus maripaludis C5, complete genomeV-type ATPase, 116 kDa subunit1e-48194
NC_009975:1500978:1512794151279415148542061Methanococcus maripaludis C6, complete genomeH(+)-transporting two-sector ATPase3e-48193
NC_005791:1028500:1031753103175310338132061Methanococcus maripaludis S2, complete genomeATP synthase subunit I3e-48193
NC_009637:302881:3089383089383109982061Methanococcus maripaludis C7 chromosome, complete genomeV-type ATP synthase subunit I2e-47191
NC_015847:1119666:1125867112586711279272061Methanococcus maripaludis XI chromosome, complete genomeV-type ATP synthase subunit I2e-47191
NC_015474:723553:7477557477557497341980Pyrococcus sp. NA2 chromosome, complete genomeV-type ATP synthase subunit I1e-46188
NC_014122:393856:4010584010584030732016Methanocaldococcus infernus ME chromosome, complete genomeV-type ATPase 116 kDa subunit5e-46186
NC_007681:1300068:1311770131177013137671998Methanosphaera stadtmanae DSM 3091, complete genomeAhaI1e-45185
NC_009635:61344:6606966069681112043Methanococcus aeolicus Nankai-3 chromosome, complete genomeV-type ATP synthase subunit I3e-45183
NC_009634:411599:4180174180174200862070Methanococcus vannielii SB chromosome, complete genomeV-type ATP synthase subunit I7e-42172
NC_015636:1477221:1490429149042914925072079Methanothermococcus okinawensis IH1 chromosome, complete genomeV-type ATPase 116 kDa subunit2e-40167
NC_000868:1730820:1744954174495417469331980Pyrococcus abyssi GE5, complete genomeATP synthase subunit I1e-38161
NC_019977:828427:8474308474308493761947Methanomethylovorans hollandica DSM 15978, complete genomearchaeal/vacuolar-type H+-ATPase subunit I4e-36153
NC_013926:1205443:1215085121508512172232139Aciduliprofundum boonei T469 chromosome, complete genomeV-type ATPase 116 kDa subunit1e-33145
NC_018876:2380018:2399727239972724016611935Methanolobus psychrophilus R15 chromosome, complete genomeV-type ATP synthase subunit I6e-31136
NC_014330:1113145:1137575113757511394341860Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative V-type ATP synthase subunit I4e-25117
NC_018604:2579000:2618923261892326207821860Brachyspira pilosicoli WesB complete genomeputative V-type ATP synthase subunit I4e-25116
NC_019908:2068631:2077896207789620797551860Brachyspira pilosicoli P43/6/78 chromosome, complete genomeV-type ATP synthase subunit I6e-25116
NC_015160:2295010:2313403231340323153011899Odoribacter splanchnicus DSM 20712 chromosome, complete genomeV-type ATPase 116 kDa subunit2e-23111
NC_018607:290500:3021943021943040441851Brachyspira pilosicoli B2904 chromosome, complete genomeV-type ATP synthase subunit I3e-23110
NC_013741:1390823:1394820139482013969132094Archaeoglobus profundus DSM 5631, complete genomeV-type ATPase 116 kDa subunit7e-23109
NC_016148:951446:9619189619189638341917Thermovirga lienii DSM 17291 chromosome, complete genomeV-type ATPase 116 kDa subunit6e-21103
NC_017243:3141500:3148412314841231502111800Brachyspira intermedia PWS/A chromosome, complete genomeV-type ATP synthase subunit I2e-1997.8
NC_012225:2198987:2208546220854622104141869Brachyspira hyodysenteriae WA1, complete genomeputative V-type ATP synthase subunit I2e-1997.8
NC_019791:1189908:1205010120501012070552046Caldisphaera lagunensis DSM 15908 chromosome, complete genomearchaeal/vacuolar-type H+-ATPase subunit I3e-1894
NC_018012:1935500:1936615193661519385101896Thiocystis violascens DSM 198 chromosome, complete genomearchaeal/vacuolar-type H+-ATPase subunit I2e-1791.7
NC_014614:2434017:2448062244806224500411980Clostridium sticklandii, complete genomeputative V-type sodium ATP synthase subunit I2e-1791.3
NC_014315:1042556:1058905105890510607911887Nitrosococcus watsoni C-113 chromosome, complete genomeV-type ATPase 116 kDa subunit2e-1687.8
NC_005877:509877:5144365144365163581923Picrophilus torridus DSM 9790, complete genomeATP synthase subunit I5e-1480.1
NC_010673:82586:8706587065888971833Borrelia hermsii DAH, complete genomeV-type sodium ATP synthase subunit I2e-1378.2
NC_008710:79100:8700387003888231821Borrelia turicatae 91E135, complete genomeV-type sodium ATP synthase subunit I2e-1378.2
NC_007484:2392739:2396096239609623979821887Nitrosococcus oceani ATCC 19707, complete genomeV-type ATPase, 116 kDa subunit4e-1170.5
NC_007181:1295956:1319118131911813212052088Sulfolobus acidocaldarius DSM 639, complete genomeATP synthase subunit I3e-1067.8
NC_012588:1443753:1457563145756314596682106Sulfolobus islandicus M.14.25 chromosome, complete genomeV-type ATP synthase subunit I2e-1067.8
NC_012632:1568170:1581980158198015840852106Sulfolobus islandicus M.16.27 chromosome, complete genomeV-type ATP synthase subunit I2e-1067.8
NC_012726:1431745:1445555144555514476602106Sulfolobus islandicus M.16.4 chromosome, complete genomeV-type ATP synthase subunit I2e-1067.8
NC_002689:46243:5675556755586861932Thermoplasma volcanium GSS1, complete genomeATP synthase subunit I4e-1067
NC_009440:1857589:1860823186082318629402118Metallosphaera sedula DSM 5348 chromosome, complete genomeV-type ATP synthase subunit I5e-1066.6
NC_012622:1421098:1434908143490814370132106Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeV-type ATP synthase subunit I6e-1066.6
NC_012589:1531725:1545535154553515476402106Sulfolobus islandicus L.S.2.15, complete genomeV-type ATPase 116 kDa subunit6e-1066.6
NC_017276:1335474:1349284134928413513892106Sulfolobus islandicus REY15A chromosome, complete genomeV-type ATPase 116 kDa subunit7e-1066.2
NC_017275:1486526:1500335150033515024402106Sulfolobus islandicus HVE10/4 chromosome, complete genomeV-type ATPase 116 kDa subunit8e-1066.2
NC_012623:1119192:1121076112107611231812106Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeV-type ATP synthase subunit I1e-0965.9
NC_011244:94756:99237992371010721836Borrelia recurrentis A1, complete genomeV-type ATP synthase subunit I1e-0965.5
NC_005213:202400:3573663573663587541389Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein3e-0963.9
NC_005213:295994:3573663573663587541389Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein3e-0963.9
NC_015408:1035690:1047743104774310496861944Chlamydophila pecorum E58 chromosome, complete genomeV-type ATP synthase subunit I2e-0861.6
NC_015435:310406:3242203242203263132094Metallosphaera cuprina Ar-4 chromosome, complete genomeV-type ATP synthase subunit I5e-0860.1
NC_002754:491695:4934054934054955102106Sulfolobus solfataricus P2, complete genomeATP synthase subunit I9e-0859.3
NC_003106:1435295:1436999143699914391042106Sulfolobus tokodaii str. 7, complete genomeATP synthase subunit I2e-0758.5
NC_015518:1052701:1066438106643810686002163Acidianus hospitalis W1 chromosome, complete genomeV-type ATPase 116 kDa subunit5e-0757