Pre_GI: BLASTP Hits

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Query: NC_008593:2250871:2264725 Clostridium novyi NT, complete genome

Start: 2264725, End: 2265537, Length: 813

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017297:122383:142041142041142808768Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein5e-39161
NC_012563:122000:140904140904141671768Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein6e-39161
NC_012658:125500:144410144410145177768Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein6e-39161
NC_009495:128000:146968146968147735768Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein5e-39161
NC_009697:120117:139771139771140538768Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein5e-39161
NC_009698:120119:139773139773140540768Clostridium botulinum A str. Hall chromosome, complete genomehypothetical protein5e-39161
NC_009699:122000:141777141777142544768Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein5e-39161
NC_010520:121077:140752140752141519768Clostridium botulinum A3 str. Loch Maree, complete genomehypothetical protein6e-38157
NC_010516:127000:146761146761147528768Clostridium botulinum B1 str. Okra, complete genomehypothetical protein8e-37154
NC_008261:2743942:275752327575232758206684Clostridium perfringens ATCC 13124, complete genomehypothetical protein3e-1169.3