Pre_GI: BLASTP Hits

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Query: NC_008593:1797000:1812234 Clostridium novyi NT, complete genome

Start: 1812234, End: 1813382, Length: 1149

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2024154:2037711203771120388051095Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein6e-125447
NC_012658:482313:4888464888464899611116Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative lipoprotein3e-48192
NC_010520:496500:5007005007005018151116Clostridium botulinum A3 str. Loch Maree, complete genomeputative lipoprotein4e-48192
NC_017297:490922:4979274979274990421116Clostridium botulinum F str. 230613 chromosome, complete genomeputative lipoprotein7e-48191
NC_009699:490652:4976574976574987721116Clostridium botulinum F str. Langeland chromosome, complete genomelipoprotein7e-48191
NC_010516:514000:5180445180445191591116Clostridium botulinum B1 str. Okra, complete genomeputative lipoprotein1e-47190
NC_012563:519037:5256685256685267831116Clostridium botulinum A2 str. Kyoto, complete genomeputative lipoprotein3e-47189
NC_009698:467500:4718764718764729911116Clostridium botulinum A str. Hall chromosome, complete genomelipoprotein1e-46187
NC_009697:444801:4514884514884526031116Clostridium botulinum A str. ATCC 19397 chromosome, completelipoprotein1e-46187
NC_009495:482500:4865514865514876661116Clostridium botulinum A str. ATCC 3502 chromosome, complete genomelipoprotein1e-46187
NC_004557:558500:5606135606135617581146Clostridium tetani E88, complete genomehypothetical protein3e-44179