Pre_GI: BLASTP Hits

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Query: NC_008268:5745620:5761830 Rhodococcus sp. RHA1, complete genome

Start: 5761830, End: 5764502, Length: 2673

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009142:5647737:5652066565206656544082343Saccharopolyspora erythraea NRRL 2338, complete genomeprotein kinase/transcriptional regulator, LuxR family3e-106387
NC_012522:3224526:3224526322452632277893264Rhodococcus opacus B4, complete genomeputative serine/threonine protein kinase1e-102375
NC_012522:3224526:3240223324022332430362814Rhodococcus opacus B4, complete genomeputative LuxR family transcriptional regulator2e-97357
NC_008271:35909:5350253502567713270Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprotein kinase/ transcriptional regulator, LuxR family2e-91337
NC_012522:98567:1091781091781114962319Rhodococcus opacus B4, complete genomeputative LuxR family transcriptional regulator5e-90333
NC_003888:1395319:1406138140613814084802343Streptomyces coelicolor A3(2), complete genomemulti-domain regulatory protein4e-83310
NC_007777:1170406:1178211117821111806552445Frankia sp. CcI3, complete genometranscriptional regulator, LuxR family5e-83309
NC_008278:175500:1932821932821955912310Frankia alni ACN14a, complete genomeputative transcriptional regulator4e-80300
NC_014318:6395392:6399946639994664026392694Amycolatopsis mediterranei U32 chromosome, complete genomepredicted ATPase9e-73275
NC_017186:6395435:6399989639998964021722184Amycolatopsis mediterranei S699 chromosome, complete genomeATPase2e-72274
NC_008268:3418000:3423885342388534257231839Rhodococcus sp. RHA1, complete genomeprobable transcriptional regulator, LuxR family2e-71271
NC_006087:2214209:2232154223215422344032250Leifsonia xyli subsp. xyli str. CTCB07, complete genometranscriptional regulator, LuxR family1e-58229
NC_015848:2859145:2865525286552528688693345Mycobacterium canettii CIPT 140010059, complete genomeputative transcriptional regulatory protein1e-53212
NC_019950:2830682:2837062283706228404063345Mycobacterium canettii CIPT 140060008 complete genomePutative LuxR family transcriptional regulator2e-53211
NC_009565:2806000:2810784281078428141973414Mycobacterium tuberculosis F11, complete genomehypothetical transcriptional regulatory protein, luxR-family6e-51203
NC_009525:2802987:2809435280943528128483414Mycobacterium tuberculosis H37Ra, complete genomeLuxR family transcriptional regulator6e-51203
NC_002945:2757821:2764268276426827676813414Mycobacterium bovis AF2122/97, complete genomeLuxR family transcriptional regulator6e-51203
NC_000962:2791019:2797467279746728008803414Mycobacterium tuberculosis H37Rv, complete genomePROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (LUXR-FAMILY)6e-51203
NC_002755:2788000:2792955279295527962963342Mycobacterium tuberculosis CDC1551, complete genometranscriptional regulator, LuxR family6e-51203
NC_016804:2735897:2740639274063927440523414Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative transcriptional regulatory protein, LuxR family6e-51202
NC_012207:2747599:2754045275404527574583414Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transcriptional regulatory protein6e-51202
NC_008769:2754828:2761274276127427646873414Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative transcriptional regulatory protein (luxR-family)6e-51202
NC_019673:4687289:4697284469728447004093126Saccharothrix espanaensis DSM 44229 complete genomeProtein kinase8e-50199
NC_013757:1732747:1743495174349517463262832Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, winged helix family3e-49197
NC_015379:4426827:4424076442407644268652790Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, unclassified5e-49196
NC_013757:2659930:2674458267445826773312874Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, winged helix family9e-48192
NC_013235:5849659:5871616587161658748973282Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, winged helix family1e-47192
NC_007510:1959883:1998966199896620015992634Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, winged helix family2e-47191
NC_016582:6999074:7026400702640070305004101Streptomyces bingchenggensis BCW-1 chromosome, complete genomeAfsR-like regulatory protein7e-46186
NC_016111:3577572:3599142359914236023393198Streptomyces cattleya NRRL 8057, complete genomeAfsR-like regulatory protein2e-45184
NC_020453:7826358:7855205785520578580932889Agromonas oligotrophica S58 DNA, complete genomeputative ATPase5e-44180
NC_014815:2055286:2070183207018320734463264Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, winged helix family1e-43178
NC_011666:2335765:2355909235590923587662858Methylocella silvestris BL2, complete genome7e-43176
NC_013947:3534209:3536416353641635391752760Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, LuxR family1e-42176
NC_009485:1946000:1956702195670219596202919Bradyrhizobium sp. BTAi1 chromosome, complete genometranscriptional regulator2e-42175
NC_016943:1314500:1314500131450013177873288Blastococcus saxobsidens DD2, complete genomeMulti-domain regulatory protein1e-42175
NC_016627:3659500:3671029367102936744903462Clostridium clariflavum DSM 19732 chromosome, complete genomeputative ATPase2e-41171
NC_014100:449541:4747094747094775672859Caulobacter segnis ATCC 21756 chromosome, complete genomewinged helix family transcriptional regulator1e-40169
NC_018681:5490963:5520274552027455227752502Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein6e-38160
NC_009767:4819000:4837476483747648406703195Roseiflexus castenholzii DSM 13941, complete genometranscriptional regulator, SARP family9e-37155
NC_013159:3858425:3858425385842538616073183Saccharomonospora viridis DSM 43017, complete genomepredicted ATPase2e-36154
NC_013947:3785332:3786080378608037888242745Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, LuxR family1e-35152
NC_019673:3253650:3276007327600732792493243Saccharothrix espanaensis DSM 44229 complete genomeATPase-like protein1e-35152
NC_007492:6372900:6402638640263864054902853Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, Winged helix family2e-35151
NC_014100:2782000:2782139278213927849822844Caulobacter segnis ATCC 21756 chromosome, complete genomewinged helix family transcriptional regulator1e-34148
NC_011831:853433:8542868542868566252340Chloroflexus aggregans DSM 9485, complete genometranscriptional regulator, XRE family3e-31137
NC_015711:3697808:3715641371564137188173177Myxococcus fulvus HW-1 chromosome, complete genomeadenylate/guanylate cyclase domain-containing protein2e-30135
NC_010512:110932:1170741170741185551482Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, winged helix family9e-30132
NC_013947:460398:4835324835324866183087Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, winged helix family1e-29132
NC_015379:4426827:4426827442682744283141488Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, unclassified3e-28127
NC_014217:1352777:1360468136046813633112844Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, winged helix family3e-28127
NC_010676:3009980:3009980300998030114941515Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, winged helix family2e-22108
NC_015312:61752:7863778637814442808Pseudonocardia dioxanivorans CB1190 chromosome, complete genomewinged helix family transcriptional regulator1e-20102
NC_015671:3211972:3226190322619032294293240Cellvibrio gilvus ATCC 13127 chromosome, complete genometranscriptional regulator, winged helix family9e-1893.2
NC_020302:2116468:2137332213733221388551524Corynebacterium halotolerans YIM 70093 = DSM 44683, completeATPase-like protein4e-1377.4
NC_019673:6473743:6483586648358664864052820Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, SARP family3e-1068.2
NC_009664:4423829:4660121466012146629882868Kineococcus radiotolerans SRS30216, complete genomeregulatory protein LuxR5e-1067.4
NC_013947:5682895:5695664569566456984052742Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, SARP family1e-0966.2
NC_016887:3286436:3286436328643632882921857Nocardia cyriacigeorgica GUH-2, complete genomeLuxR family transcriptional regulator (fragment)8e-0963.2
NC_018750:3661243:3681256368125636826591404Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein3e-0861.2
NC_009142:827912:839954839954840835882Saccharopolyspora erythraea NRRL 2338, complete genometransposase, ISlxx1-degenerated4e-0860.8
NC_009142:2801517:2820725282072528219631239Saccharopolyspora erythraea NRRL 2338, complete genomeIS21 family transposase7e-0860.1
NC_015588:1847500:187286118728611873721861Isoptericola variabilis 225 chromosome, complete genomeIntegrase catalytic region1e-0759.7
NC_018515:1406816:1406816140681614094732658Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeATP-dependent transcriptional regulator9e-0859.7
NC_018583:95388:1171251171251184141290Gordonia sp. KTR9 plasmid pGKT3, complete sequenceTransposase-like protein1e-0759.3
NC_007974:1717828:171713617171361717831696Ralstonia metallidurans CH34 chromosome 2, complete sequencetwo component transcriptional regulator, LuxR family3e-0758.2
NC_015434:5411:1408914089153151227Verrucosispora maris AB-18-032 chromosome, complete genomeintegrase catalytic subunit4e-0757.8
NC_009664:4696961:4699553469955347024382886Kineococcus radiotolerans SRS30216, complete genomeregulatory protein LuxR5e-0757.4
NC_015564:2870631:2901783290178329034231641Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomeregulatory protein LuxR6e-0757
NC_016109:8256000:8273040827304082759162877Kitasatospora setae KM-6054, complete genomeputative LuxR family transcriptional regulator8e-0756.6
NC_014960:1697818:172914817291481729801654Anaerolinea thermophila UNI-1, complete genomeNarL family two-component response regulator1e-0656.2
NC_013530:2819569:2828163282816328294491287Xylanimonas cellulosilytica DSM 15894, complete genomeIntegrase catalytic region2e-0655.5
NC_010407:2406113:242079324207932421491699Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative two component system response regulator2e-0655.5
NC_015859:1147537:116788811678881168673786Corynebacterium variabile DSM 44702 chromosome, complete genometwo-component system response regulator3e-0655.1
NC_013093:2471574:2482116248211624849862871Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, LuxR family2e-0655.1
NC_014391:3445672:346042434604243461083660Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeresponse regulator receiver2e-0655.1
NC_009953:3224412:3238114323811432393401227Salinispora arenicola CNS-205 chromosome, complete genomeintegrase catalytic protein3e-0654.7
NC_016584:3826300:3836450383645038411504701Desulfosporosinus orientis DSM 765 chromosome, complete genomeATPase3e-0654.7
NC_008819:199760:212018212018212290273Prochlorococcus marinus str. NATL1A, complete genomeBacterial regulatory protein, LuxR family3e-0654.7
NC_012522:5987644:6010020601002060128692850Rhodococcus opacus B4, complete genomeputative LuxR family transcriptional regulator4e-0654.3
NC_007760:3948730:396420739642073964734528Anaeromyxobacter dehalogenans 2CP-C, complete genometranscriptional regulator, LuxR family4e-0654.3
NC_017955:1555990:1555990155599015585392550Modestobacter marinus, complete genomeRegulatory protein4e-0654.3
NC_008148:2498000:252802925280292528718690Rubrobacter xylanophilus DSM 9941, complete genometwo component transcriptional regulator, LuxR family4e-0654.3
NC_019673:3041936:305598930559893056432444Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein5e-0653.9
NC_006177:520055:533611533611534207597Symbiobacterium thermophilum IAM 14863, complete genometwo-component response regulator5e-0653.9
NC_015957:8569721:859217685921768592853678Streptomyces violaceusniger Tu 4113 chromosome, complete genomeLuxR family two component transcriptional regulator5e-0653.9
NC_009077:2308634:234057123405712341365795Mycobacterium sp. JLS, complete genomeIS1533 transposase6e-0653.9
NC_015953:4746983:477037547703754771031657Streptomyces sp. SirexAA-E chromosome, complete genomeLuxR family two component transcriptional regulator6e-0653.5
NC_007335:1474455:148671214867121486987276Prochlorococcus marinus str. NATL2A, complete genomeregulatory protein, LuxR7e-0653.5
NC_006087:1425682:1438256143825614393231068Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, ISlxx1-degenerated9e-0653.1