Pre_GI: BLASTP Hits

Some Help

Query: NC_008268:4669530:4674995 Rhodococcus sp. RHA1, complete genome

Start: 4674995, End: 4676221, Length: 1227

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012522:4692260:4694641469464146958341194Rhodococcus opacus B4, complete genomehypothetical protein0651
NC_013411:735838:7468257468257480211197Geobacillus sp. Y412MC61, complete genomeprotein of unknown function DUF2011e-30134
NC_014915:2847680:2854536285453628557321197Geobacillus sp. Y412MC52 chromosome, complete genomeprotein of unknown function DUF2011e-30134
NC_016593:2851243:2857572285757228587681197Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completecarboxylase4e-30132
NC_006510:2778777:2785106278510627863021197Geobacillus kaustophilus HTA426, complete genomehypothetical protein4e-30132
NC_014206:771765:7825757825757837711197Geobacillus sp. C56-T3 chromosome, complete genomehypothetical protein4e-29129
NC_013722:2919560:2934132293413229354031272Xanthomonas albilineans, complete genomeputative carbamoyl-phosphate synthase, cpsase protein9e-29128
NC_014206:1202907:1211656121165612128791224Geobacillus sp. C56-T3 chromosome, complete genomehypothetical protein7e-27121
NC_014150:3085013:3107308310730831094792172Brachyspira murdochii DSM 12563 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain protein ATP-grasp2e-26120
NC_016633:1798758:1810586181058618117821197Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebiotin carboxylase2e-26120
NC_017243:1558000:1577367157736715795142148Brachyspira intermedia PWS/A chromosome, complete genomeL-lactate dehydrogenase3e-26119
NC_010516:2877407:2885755288575528869001146Clostridium botulinum B1 str. Okra, complete genomeputative carbamoyl-phosphate synthase large chain3e-26119
NC_008278:5053899:5079799507979950810521254Frankia alni ACN14a, complete genomehypothetical protein4e-26119
NC_015738:978794:9901309901309913351206Eggerthella sp. YY7918, complete genomebiotin carboxylase3e-25116
NC_015732:982774:9915969915969928521257Spirochaeta caldaria DSM 7334 chromosome, complete genomehypothetical protein3e-24113
NC_015957:5136500:5147067514706751483591293Streptomyces violaceusniger Tu 4113 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein ATP-grasp8e-24111
NC_013204:2826500:2847006284700628482141209Eggerthella lenta DSM 2243, complete genomeprotein of unknown function DUF2016e-23108
NC_007517:480303:4953134953134965271215Geobacter metallireducens GS-15, complete genomeputative glycolate oxidase6e-22105
NC_013206:21288:2917129171304031233Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446phosphoribosylglycinamide synthetase1e-21104
NC_003888:7659639:7662638766263876638551218Streptomyces coelicolor A3(2), complete genomecarboxylase1e-21104
NC_013411:735838:7456037456037468321230Geobacillus sp. Y412MC61, complete genomeprotein of unknown function DUF2018e-21102
NC_014915:2847680:2855725285572528569541230Geobacillus sp. Y412MC52 chromosome, complete genomeprotein of unknown function DUF2018e-21102
NC_014206:771765:7813537813537825821230Geobacillus sp. C56-T3 chromosome, complete genomehypothetical protein3e-20100
NC_011831:2728932:2747266274726627485221257Chloroflexus aggregans DSM 9485, complete genomephosphoribosylglycinamide synthetase6e-2099
NC_016593:2851243:2858761285876128599901230Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein7e-2098.6
NC_006510:2778777:2786295278629527875211227Geobacillus kaustophilus HTA426, complete genomehypothetical protein8e-2098.6
NC_015381:1318818:1341068134106813423061239Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-1997.8
NC_020304:2677372:2698138269813826992921155Desulfocapsa sulfexigens DSM 10523, complete genomebiotin carboxylase2e-1997.1
NC_011567:238249:2382492382492394871239Anoxybacillus flavithermus WK1, complete genomeAlanine-anticapsin ligase bacD related protein3e-1996.3
NC_017219:538864:5622905622905635791290Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein5e-1995.9
NC_011593:533884:5624975624975637861290Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,dehydrogenase5e-1995.9
NC_014500:4049384:4060026406002640612251200Dickeya dadantii 3937 chromosome, complete genomeargininosuccinate lyase1e-1791.3
NC_020409:1407857:1417655141765514188781224Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein2e-1790.9
NC_016582:7737930:7761321776132177625861266Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein3e-1790.1
NC_009784:1231791:1234778123477812358271050Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein6e-1789
NC_014391:1910273:1927787192778719290371251Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein1e-1687.4
NC_013223:724394:7430347430347442661233Desulfohalobium retbaense DSM 5692, complete genomephosphoribosylglycinamide synthetase2e-1687.4
NC_013440:8405719:8423293842329384244861194Haliangium ochraceum DSM 14365, complete genomeprotein of unknown function DUF2018e-1685.1
NC_009832:4482500:4508690450869045099311242Serratia proteamaculans 568, complete genomeprotein of unknown function DUF2011e-1584.7
NC_013595:4031947:4057207405720740584421236Streptosporangium roseum DSM 43021, complete genomehypothetical protein1e-1584.7
NC_011663:1627220:1644567164456716457961230Shewanella baltica OS223 chromosome, complete genomehypothetical protein1e-1584.3
NC_013525:1221604:1263705126370512650181314Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeprotein of unknown function DUF2011e-1584.3
NC_014206:2516000:2542163254216325433981236Geobacillus sp. C56-T3 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein ATP-grasp8e-1582
NC_014915:1080793:1088971108897110902061236Geobacillus sp. Y412MC52 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain protein ATP-grasp8e-1582
NC_013411:1941762:1949027194902719502621236Geobacillus sp. Y412MC61, complete genomeATP-dependent carboxylate-amine ligase domain protein ATP-grasp8e-1582
NC_009052:3467000:3471137347113734723541218Shewanella baltica OS155, complete genomephosphoribosylglycinamide synthetase1e-1481.6
NC_014500:4883794:490090549009054901627723Dickeya dadantii 3937 chromosome, complete genomephosphoribosylglycinamide synthetase ATP-grasp (A) domain-containing protein9e-1581.6
NC_008278:5012000:5046368504636850475911224Frankia alni ACN14a, complete genomehypothetical protein; putative Glutathione synthetase ATP-binding domain2e-1480.5
NC_016633:1798758:1812218181221818133481131Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebiotin carboxylase3e-1479.7
NC_004578:212468:2225282225282237451218Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-1377.8
NC_020211:1655826:1662601166260116638421242Serratia marcescens WW4, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein2e-1377.4
NC_014479:188009:2038432038432050691227Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative amino acid ligase of ATP-grasp superfamily4e-1376.3
NC_014166:2959688:2970841297084129719501110Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein4e-1376.3
NC_015160:3556114:3562846356284635640511206Odoribacter splanchnicus DSM 20712 chromosome, complete genomeputative carbamoyl-phosphate-synthetase6e-1375.9
NC_019973:5899142:5899142589914259004281287Mesorhizobium australicum WSM2073, complete genomebiotin carboxylase5e-1375.9
NC_014923:5970182:5970182597018259714681287Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeCarbamoyl-phosphate synthase L chain ATP-binding protein5e-1375.9
NC_015675:6493444:6524853652485365261391287Mesorhizobium opportunistum WSM2075 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein ATP-grasp5e-1375.9
NC_011593:533884:5666705666705679111242Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein4e-1375.9
NC_017219:538864:5664635664635677041242Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein4e-1375.9
NC_007645:3581114:3583320358332035845581239Hahella chejuensis KCTC 2396, complete genomeprobable carbamoylphosphate synthase4e-1273.2
NC_002678:4885790:4900276490027649015051230Mesorhizobium loti MAFF303099, complete genomehypothetical protein4e-1273.2
NC_011593:533884:5654655654655666671203Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,phosphoribosylglycinamide synthetase3e-1170.1
NC_017219:538864:5652585652585664601203Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein3e-1170.1
NC_014923:5940500:5957129595712959583491221Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeATP-dependent carboxylate-amine ligase domain protein ATP-grasp3e-1170.1
NC_019973:5869500:5886089588608958873091221Mesorhizobium australicum WSM2073, complete genomebiotin carboxylase3e-1170.1
NC_015675:6493444:6511800651180065130201221Mesorhizobium opportunistum WSM2075 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein ATP-grasp3e-1170.1
NC_008268:4669530:4676465467646546777241260Rhodococcus sp. RHA1, complete genomehypothetical protein1e-1068.2
NC_006322:203932:2049512049512061681218Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-1068.2
NC_006270:204000:2051442051442063611218Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-1068.2
NC_016631:2051475:2054459205445920556611203Granulicella mallensis MP5ACTX8 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein1e-1068.2
NC_012522:4692260:4695859469585946971181260Rhodococcus opacus B4, complete genomehypothetical protein1e-1068.2
NC_014841:131308:1390631390631403101248Pantoea sp. At-9b plasmid pPAT9B04, complete sequencehypothetical protein1e-1067.8
NC_008740:2905990:2917898291789829190941197Marinobacter aquaeolei VT8, complete genomeputative carbamoyl-phosphate-synthetase1e-1067.8
NC_008278:2732890:2755864275586427572311368Frankia alni ACN14a, complete genomehypothetical protein3e-1066.6
NC_016112:3103716:3135584313558431367771194Methylomicrobium alcaliphilum chromosome, complete genomehypothetical protein4e-1066.2
NC_015566:3417951:3435925343592534371451221Serratia sp. AS12 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein ATP-grasp5e-1066.2
NC_016516:1345840:1360324136032413616311308Propionibacterium acnes TypeIA2 P.acn33 chromosome, completebiotin carboxylase8e-1065.5
NC_016511:1354949:1369434136943413707411308Propionibacterium acnes TypeIA2 P.acn31 chromosome, completebiotin carboxylase8e-1065.5
NC_016512:1357225:1368879136887913701861308Propionibacterium acnes TypeIA2 P.acn17 chromosome, completebiotin carboxylase9e-1065.1
NC_006085:1379370:1393836139383613951431308Propionibacterium acnes KPA171202, complete genomeconserved protein, putative biotin carboxylase8e-1065.1
NC_013440:8405719:8418758841875884199901233Haliangium ochraceum DSM 14365, complete genomeATP-dependent carboxylate-amine ligase domain protein ATP-grasp6e-0962.4
NC_008322:1595500:1606266160626616074531188Shewanella sp. MR-7, complete genomeprotein of unknown function DUF2017e-0962.4
NC_015500:900807:9104639104639116681206Treponema brennaborense DSM 12168 chromosome, complete genomeATP-grasp fold domain protein, DUF201-type9e-0962
NC_012779:1820244:1825085182508518263261242Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-0861.2
NC_013440:8405719:8417415841741584187401326Haliangium ochraceum DSM 14365, complete genomehypothetical protein8e-0858.5
NC_014976:759129:7710707710707723111242Bacillus subtilis BSn5 chromosome, complete genomephosphoribosylglycinamide synthetase1e-0757.8
NC_013440:8405719:8416192841619284174181227Haliangium ochraceum DSM 14365, complete genomeATP-dependent carboxylate-amine ligase domain protein ATP-grasp2e-0757.4
NC_015381:1318818:1342320134232013436371318Burkholderia gladioli BSR3 chromosome 1, complete sequence4e-0756.2
NC_011886:177039:1977421977421995171776Arthrobacter chlorophenolicus A6, complete genomeCarbamoyl-phosphate synthase L chain ATP-binding4e-0756.2
NC_005773:4899252:4913517491351749147821266Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein4e-0756.2
NC_008309:1851189:1873643187364318748211179Haemophilus somnus 129PT, complete genomehypothetical protein5e-0755.8
NC_016842:748419:7640437640437658361794Treponema pallidum subsp. pertenue str. SamoaD chromosome, completebiotin carboxylase5e-0755.8
NC_016843:747950:7642307642307660231794Treponema pallidum subsp. pertenue str. Gauthier chromosome,biotin carboxylase5e-0755.8
NC_016848:748873:7644977644977662901794Treponema pallidum subsp. pertenue str. CDC2 chromosome, completebiotin carboxylase5e-0755.8
NC_014500:4883794:4902076490207649032841209Dickeya dadantii 3937 chromosome, complete genomeNikkomycin biosynthesis protein, carboxylase8e-0755.5
NC_008543:2871747:2890204289020428915651362Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceprotein of unknown function DUF2018e-0755.5
NC_008061:2368517:2375417237541723767781362Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceprotein of unknown function DUF2018e-0755.5
NC_010741:745357:7639087639087657011794Treponema pallidum subsp. pallidum SS14, complete genomepossible phosphoribosylglycinamide formyltransferase6e-0755.5
NC_000919:746875:7624607624607642531794Treponema pallidum subsp. pallidum str. Nichols, complete genomephosphoribosylglycinamide formyltransferase, putative6e-0755.5
NC_016844:748117:7643977643977661901794Treponema pallidum subsp. pallidum DAL-1 chromosome, completebiotin carboxylase6e-0755.5
NC_017268:747429:7637097637097655021794Treponema pallidum subsp. pallidum str. Chicago chromosome,CarB family protein6e-0755.5
NC_021508:745388:7639397639397657321794Treponema pallidum subsp. pallidum SS14, complete genomebiotin carboxylase6e-0755.5
NC_015714:741044:7573247573247591171794Treponema paraluiscuniculi Cuniculi A chromosome, complete genomebiotin carboxylase2e-0653.9
NC_015733:864959:8871728871728884821311Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-0653.1
NC_014228:3353896:3373452337345233747171266Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein6e-0652.4